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Ganaxolone

Alias: CCD-1042; CCD 1042; C1042; GANAXOLONE; 38398-32-2; 3alpha-Hydroxy-3beta-methyl-5alpha-pregnan-20-one; ganaxolona; UNII-98WI44OHIQ; 98WI44OHIQ; DTXSID6046503; CCD1042; CCD-1042; Ztalmy Ganaxolone
Cat No.:V17221 Purity: ≥98%
Ganaxolone (CCD-1042; C-1042; Ztalmy) is a novel, CNS-active and potent GABAA modulator.
Ganaxolone
Ganaxolone Chemical Structure CAS No.: 38398-32-2
Product category: New12
This product is for research use only, not for human use. We do not sell to patients.
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Product Description

Ganaxolone (CCD-1042; C-1042; Ztalmy) is a novel, CNS-active and potent GABAA modulator. As of March 2022, the US FDA has approved Ztalmy (ganaxolone) to treat seizures associated with cyclin-dependent kinase-like 5 (CDKL5) deficiency disorder (CDD) in patients 2 years of age and older. This is the first treatment for seizures associated with CDD and the first treatment specifically for CDD. Ganaxolone acts on well-characterized targets in the brain known to have anxiolytic and anticonvulsant effects.

Biological Activity I Assay Protocols (From Reference)
Targets
Target: [1]
Ganaxolone acts as a positive allosteric modulator of GABAA receptors, binding to neurosteroid sites with highest affinity for synaptic δ-subunit-containing receptors (EC50 = 0.28 μM for α1β2δ receptors).
ln Vivo
In Vivo: [1]
In adult male rat anxiety models (elevated plus maze), acute intraperitoneal injection of Ganaxolone (10 mg/kg) increased open-arm exploration time by 75% (p<0.01) and reduced anxiety scores by 40% compared to vehicle controls.

In juvenile rat maternal separation models, chronic oral administration of Ganaxolone (5 mg/kg/day for 14 days) normalized stress-induced HPA axis dysregulation, reducing corticosterone levels by 35% (p<0.05) and reversing social interaction deficits. [2]
Animal Protocol
Animal Protocol: [1]
Acute anxiety studies: Ganaxolone was dissolved in 20% β-cyclodextrin and administered intraperitoneally at 5, 10, or 20 mg/kg 30 min pre-test. Behavioral assessments included elevated plus maze and open field tests.

Developmental studies: Oral suspension of Ganaxolone (2.5 or 5 mg/kg) in 0.5% methylcellulose was given daily via gavage to postnatal day 21-35 rats. Plasma and brain tissue collected 1 h post-final dose. [2]
ADME/Pharmacokinetics
Absorption, Distribution and Excretion
Following oral administration, maximum plasma concentrations are reached within 2 to 3 hours.
Following a single oral dose of radiolabeled ganaxolone in healthy male subjects, 55% of the administered radioactivity was recovered in the feces (2% as unchanged parent drug) and 18% was recovered in the urine (none of which comprised unchanged parent drug).
Both ganaxolone and its metabolites are widely distributed into tissues following oral administration, with a typical tissue-to-plasma ratio >5:1.
Metabolism / Metabolites
Ganaxolone is extensively metabolized, primarily by CYP3A4/5 and, to a lesser extent, CYP2B6, CYP2C19, and CYP2D6. While data regarding ganaxolone metabolism are lacking, a 16-OH metabolite generated via CYP3A4 metabolism has been identified as one of its major metabolites.
Biological Half-Life
The terminal half-life of ganaxolone is 34 hours.
ADME/Pharmacokinetics: [1]
Peak plasma concentration (Cmax) reached 850 ng/mL at 30 min post-IP injection (10 mg/kg) in rats; brain-to-plasma ratio was 2.3, indicating preferential CNS accumulation.

Oral bioavailability was 92% in juvenile rats with dose-proportional exposure; elimination half-life (t½) was 1.8 h. [2]
Toxicity/Toxicokinetics
Effects During Pregnancy and Lactation
◉ Summary of Use during Lactation
No published information is available on the clinical use of ganaxolone during breastfeeding. However, a study by the manufacturer indicates that amounts in breastmilk appear to be low and would not be expected to cause any adverse effects in breastfed infants.
◉ Effects in Breastfed Infants
Relevant published information was not found as of the revision date.
◉ Effects on Lactation and Breastmilk
Relevant published information was not found as of the revision date.
Protein Binding
Ganaxolone is approximately 99% protein-bound in serum.
Toxicity/Toxicokinetics: [1]
No motor impairment at anxiolytic doses (rotarod test, ≤20 mg/kg). Plasma protein binding >98%.

Chronic exposure caused no weight loss or organ toxicity; however, 5 mg/kg/day reduced juvenile play behavior by 20% (p<0.05), suggesting dose-dependent behavioral effects. [2]
References
[1]. Psychopharmacology (Berl). 2015 Apr;232(8):1415-26.
[2]. Dev Psychobiol. 2024 Nov;66(7):e22554.
Additional Infomation
Additional Info: [1]
Ganaxolone is a synthetic analog of allopregnanolone developed for treatment-resistant epilepsy and anxiety disorders. Phase 2 trials demonstrated 35% seizure reduction in CDKL5 deficiency disorder.

It modulates GABAergic inhibition without benzodiazepine-like tolerance. FDA-approved in 2022 for cyclin-dependent kinase-like 5 (CDKL5) deficiency disorder-related seizures.[2]
Ganaxolone is a corticosteroid hormone.
Ganaxolone is a DEA Schedule V controlled substance. Substances in the DEA Schedule V have a low potential for abuse relative to substances listed in Schedule IV and consist primarily of preparations containing limited quantities of certain narcotics. It is a Depressants substance.
Ganaxolone is the 3β-methylated synthetic analog of [allopregnanolone], a metabolite of [progesterone]. Ganaxolone belongs to a class of compounds referred to as neurosteroids. Endogenous neurosteroids, which comprise certain metabolites of progesterone and deoxycorticosterone, bind potently and specifically to GABAA receptors to enhance their inhibitory effects, and are thus known to have anxiolytic, analgesic, anticonvulsant, sedative, hypnotic, and anesthetic properties. Ganaxolone, similar to its endogenous counterparts, is a positive allosteric modulator of GABAA receptors. It was approved under the brand name ZTALMY by the US FDA in March 2022 for the treatment of seizures associated with CDKL5 deficiency disorder (CDD), becoming the first FDA-approved treatment indicated specifically for CDD. In July 2023, ganaxolone was also approved under the same brand name and for the same indication by the EMA.
Ganaxolone is a Neuroactive Steroid Gamma-Aminobutyric Acid A Receptor Positive Modulator. The mechanism of action of ganaxolone is as a GABA A Receptor Positive Modulator.
Ganaxolone is an orally bioavailable synthetic analog of the neuroactive steroid allopregnanolone and positive allosteric modulator of the gamma-aminobutyric acid (GABA)-A receptor, with anxiolytic, sedative, antidepressant and anticonvulsant activities. Upon oral administration, ganaxolone specifically targets and binds to the allosteric sites of the synaptic and extrasynaptic GABA-A receptor-chloride ionophore complex in the central nervous system (CNS). This leads to an increase in the opening of chloride channels, membrane hyperpolarization, increases the inhibitory effect of GABA on the CNS, and inhibits neurotransmission. This blocks seizure propagation and elevates seizure thresholds.
Drug Indication
Ganaxolone is indicated for the treatment of seizures associated with cyclin-dependent kinase-like 5 (CDKL5) deficiency disorder (CDD) in patients ≥2 years old by the FDA. It is also approved as an adjuvant treatment for the same condition in patients aged 2 to 17, although it may be continued in patients 18 years old or older, by the EMA.
Ztalmy is indicated for the adjunctive treatment of epileptic seizures associated with cyclin-dependent kinase-like 5 (CDKL5) deficiency disorder (CDD) in patients 2 to 17 years of age. Ztalmy may be continued in patients 18 years of age and older.
Treatment of cyclin-dependent kinase-like 5 deficiency disorder
Mechanism of Action
Ganaxolone belongs to a novel class of neuroactive steroids sometimes referred to as "epalons", which are potent and specific positive allosteric modulators of γ-aminobutyric acid type A (GABAA) receptors in the central nervous system (CNS). It binds GABAA at one of several potential binding sites, all of which are distinct from the benzodiazepine binding site. By enhancing the inhibitory effects of GABAA receptors, endogenous and exogenous neurosteroids have been associated with anxiolytic, sedative, and anticonvulsant effects, amongst others. While the precise mechanism of action of ganaxolone in the treatment of seizures associated with CDD is unknown, its anticonvulsant effects are likely due to positive allosteric GABAA modulation
Pharmacodynamics
Ganaxolone - like other neurosteroids - lacks classical hormonal activity, and instead appears to exert its effects directly via modulation of GABAA receptors. Similar to other antiepileptic drugs, ganaxolone has been associated with significant somnolence and sedation - patients should be instructed to use caution when operating heavy machinery (e.g. driving). In addition, antiepileptic drugs may increase the risk of suicidal behaviour and ideation, although this risk has not been documented directly in patients taking ganaxolone. When considering ganaxolone therapy, clinicians should balance the risk of suicidal thoughts or behaviours with the risk of untreated illness. Ganaxolone drug scheduling is currently under review by the US Drug Enforcement Administration (DEA), but it appears to carry some potential for abuse. Clinicians should consider assessing for a history of drug abuse when deciding to initiate therapy with ganaxolone.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C22H36O2
Molecular Weight
332.528
Exact Mass
332.272
CAS #
38398-32-2
PubChem CID
6918305
Appearance
Typically exists as solid at room temperature
Density
1.036g/cm3
Boiling Point
434.8ºC at 760mmHg
Melting Point
190-198C
Flash Point
185.4ºC
Index of Refraction
1.517
LogP
4.985
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
2
Rotatable Bond Count
1
Heavy Atom Count
24
Complexity
542
Defined Atom Stereocenter Count
8
SMILES
O([H])[C@]1(C([H])([H])[H])C([H])([H])C([H])([H])[C@@]2(C([H])([H])[H])[C@]([H])(C1([H])[H])C([H])([H])C([H])([H])[C@@]1([H])[C@]3([H])C([H])([H])C([H])([H])[C@]([H])(C(C([H])([H])[H])=O)[C@@]3(C([H])([H])[H])C([H])([H])C([H])([H])[C@@]12[H]
InChi Key
PGTVWKLGGCQMBR-FLBATMFCSA-N
InChi Code
InChI=1S/C22H36O2/c1-14(23)17-7-8-18-16-6-5-15-13-20(2,24)11-12-21(15,3)19(16)9-10-22(17,18)4/h15-19,24H,5-13H2,1-4H3/t15-,16-,17+,18-,19-,20+,21-,22+/m0/s1
Chemical Name
1-((3R,5S,8R,9S,10S,13S,14S,17S)-3-hydroxy-3,10,13-trimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)ethan-1-one
Synonyms
CCD-1042; CCD 1042; C1042; GANAXOLONE; 38398-32-2; 3alpha-Hydroxy-3beta-methyl-5alpha-pregnan-20-one; ganaxolona; UNII-98WI44OHIQ; 98WI44OHIQ; DTXSID6046503; CCD1042; CCD-1042; Ztalmy Ganaxolone
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.0072 mL 15.0362 mL 30.0725 mL
5 mM 0.6014 mL 3.0072 mL 6.0145 mL
10 mM 0.3007 mL 1.5036 mL 3.0072 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
Randomized Therapy In Status Epilepticus
CTID: NCT04391569
Phase: Phase 3    Status: Completed
Date: 2024-10-15
Double-blind, Randomized, Placebo-controlled Trial of Ganaxolone in CDKL5 Deficiency Patients 6 Months to Less Than 2 Years Old
CTID: NCT05249556
Phase: Phase 3    Status: Not yet recruiting
Date: 2024-09-19
Open-label Extension to Protocol 1042-0500
CTID: NCT00442104
Phase: Phase 2    Status: Terminated
Date: 2024-05-28
To Evaluate the Efficacy, Safety, and Tolerability of Intravenous Ganaxolone Added to Standard of Care in Refractory Status Epilepticus (RSE)
CTID: NCT05814523
Phase: Phase 3    Status: Withdrawn
Date: 2024-05-14
Open-label Study of Adjunctive GNX Treatment in Children and Adu
An open-label clinical study to evaluate the safety and antiepileptic activity of ganaxolaone in treatment of patients diagnosed with infantile spasms.
CTID: null
Phase: Phase 2    Status: Ongoing, Completed
Date: 2007-05-11
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A double-blind, placebo-controlled, dose-ranging clinical study to evaluate the safety, tolerability, and antiepileptic activity of ganaxolone in treatment of patients with infantile spasms.
CTID: null
Phase: Phase 2    Status: Completed
Date: 2007-05-11


A Phase 3, Double-blind, Randomized, Placebo-controlled Trial of Adjunctive Ganaxolone (GNX) Treatment in Children and Adults with Tuberous Sclerosis Complex (TSC)-related Epilepsy (TrustTSC)
CTID: null
Phase: Phase 3    Status: Ongoing, Completed
Date:

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