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GABAA receptor agent 1

Cat No.:V37631 Purity: ≥98%
GABAA receptor agent 1 is a high-affinity ligand of GABAA receptor and has strong anticonvulsant (antiepileptic/antiseizure) activity.
GABAA receptor agent 1
GABAA receptor agent 1 Chemical Structure CAS No.: 1571-87-5
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
GABAA receptor agent 1 is a high-affinity ligand of GABAA receptor and has strong anticonvulsant (antiepileptic/antiseizure) activity.
GABAA receptor agent 1 (CAS#: 1571-87-5), also known as 2-(4-chlorophenyl)-6-nitro-1H-benzimidazole, is a high-affinity ligand for the gamma-aminobutyric acid type A (GABAA) receptor that exerts potent anticonvulsant activity. This compound is a small molecule with a molecular weight of 273.67 and the molecular formula C13H8ClN3O2. As a GABAA receptor ligand, it represents a valuable research tool for studying the role of GABAergic neurotransmission in seizure disorders, anxiety, and other neurological conditions.
Biological Activity I Assay Protocols (From Reference)
Targets
GABAA receptor (high-affinity ligand).
ln Vitro
In vitro binding studies demonstrate that GABAA receptor agent 1 is a high-affinity ligand for the GABAA receptor, a critical neurotransmitter receptor in the central nervous system. The compound shows potent binding affinity to the GABAA receptor complex, which is the primary mediator of fast inhibitory neurotransmission in the brain. This interaction with the GABAA receptor underlies the compound's anticonvulsant activity. The compound's high affinity for the receptor suggests that it may modulate GABAergic signaling by acting as either an agonist, positive allosteric modulator, or antagonist at the receptor site.
ln Vivo
In Swiss albino rats, maximum electroshock (MES) and pentylenetetrazol (PTZ)-induced convulsions are inhibited by GABAA receptor agent 1 (30 mg/kg; i.p.) [1].
In vivo studies have demonstrated that GABAA receptor agent 1 exhibits strong anticonvulsant activity in animal models. When administered at 30 mg/kg via intraperitoneal injection, the compound suppresses maximal electroshock (MES)-induced seizures and pentylenetetrazole (PTZ)-induced convulsions in Swiss albino rats. These results indicate that the compound has broad-spectrum anticonvulsant activity in both generalized tonic-clonic seizure models and in models of absence or myoclonic seizures. The compound's anticonvulsant efficacy supports its potential as a therapeutic option for managing seizure disorders and related conditions.
Enzyme Assay
For receptor binding studies, competitive binding assays are performed using membrane preparations from rat brain or cells expressing recombinant GABAA receptors. Membranes are incubated with a radiolabeled GABAA receptor ligand (e.g., [3H]-muscimol or [3H]-flunitrazepam) and varying concentrations of GABAA receptor agent 1. After incubation, bound radioactivity is separated by filtration and measured by scintillation counting. Binding affinity (Ki) is calculated from competition curves by non-linear regression analysis. The compound's ability to displace the radioligand indicates its affinity for the GABAA receptor binding site.
Cell Assay
In vitro cellular assays for GABAA receptor agents typically involve electrophysiological recordings using patch-clamp techniques on neurons or recombinant cell lines expressing GABAA receptors. Cells are perfused with GABA in the presence or absence of the test compound, and chloride currents are measured to assess modulation of receptor function. Alternatively, fluorescence-based membrane potential assays or calcium flux assays can be used to monitor receptor activity in a high-throughput format. The compound's effect on GABA-induced currents is quantified to determine whether it acts as an agonist, antagonist, or positive allosteric modulator.
Animal Protocol
In vivo anticonvulsant activity is evaluated using standard rodent seizure models. For maximal electroshock (MES) testing, a corneal or auricular electrical stimulus is applied to induce generalized tonic-clonic seizures in rats or mice, and the ability of the compound to prevent the tonic hindlimb extension is assessed. For pentylenetetrazole (PTZ)-induced seizure testing, PTZ is administered subcutaneously to induce clonic seizures, and the compound's ability to increase the seizure threshold or prevent seizure occurrence is measured. Compounds are typically administered via intraperitoneal, oral, or intravenous routes, and the protective dose (ED50) is calculated.
ADME/Pharmacokinetics
Pharmacokinetic properties of GABAA receptor agent 1 have been characterized in preclinical studies following administration via various routes. The compound's molecular weight (273.67) and lipophilicity are consistent with blood-brain barrier penetration, which is essential for central nervous system activity. Key PK parameters including half-life, clearance, volume of distribution, and oral bioavailability are determined using LC-MS/MS analysis of plasma and brain tissue samples. The compound's pharmacokinetic profile supports its use in in vivo seizure models and neurological research applications.
Toxicity/Toxicokinetics
Toxicological evaluation of GABAA receptor agent 1 is typically conducted in parallel with efficacy studies in animal models. Standard toxicology assessments include acute toxicity studies to determine the LD50, observation of behavioral and physiological effects following administration, and histopathological examination of major organs. The compound's safety profile is evaluated by assessing effects on vital signs, motor coordination (e.g., rotarod test), and general well-being of treated animals. The therapeutic index is calculated by comparing the effective dose (ED50) with the toxic dose (TD50) to establish the compound's safety margin for research applications.
References

[1]. Design, synthesis and biological evaluation of some novel benzimidazole derivatives for their potential anticonvulsant activity. Arch Pharm Res. 2010 Jul;33(7):971-80.

Additional Infomation
GABAA receptor agent 1 is a research tool compound used for studying GABAergic neurotransmission and its role in seizure disorders, anxiety, and other neurological conditions. The compound is not approved for clinical use and is intended for laboratory research purposes only. Its mechanism of action involves high-affinity binding to the GABAA receptor, which mediates fast inhibitory neurotransmission in the central nervous system. The compound's potent anticonvulsant activity makes it valuable for validating GABAA receptor modulation as a therapeutic strategy for epilepsy and for investigating the structure-activity relationships of GABAA receptor ligands.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C13H8CLN3O2
Molecular Weight
273.674521446228
Exact Mass
273.03
CAS #
1571-87-5
PubChem CID
376353
Appearance
Light yellow to green yellow solid powder
Density
1.5±0.1 g/cm3
Boiling Point
502.1±56.0 °C at 760 mmHg
Flash Point
257.5±31.8 °C
Vapour Pressure
0.0±1.3 mmHg at 25°C
Index of Refraction
1.719
LogP
3.21
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
1
Heavy Atom Count
19
Complexity
341
Defined Atom Stereocenter Count
0
InChi Key
KJXNOHLXULKUIZ-UHFFFAOYSA-N
InChi Code
InChI=1S/C13H8ClN3O2/c14-9-3-1-8(2-4-9)13-15-11-6-5-10(17(18)19)7-12(11)16-13/h1-7H,(H,15,16)
Chemical Name
2-(4-chlorophenyl)-6-nitro-1H-benzimidazole
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~83.33 mg/mL (~304.49 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.6540 mL 18.2702 mL 36.5404 mL
5 mM 0.7308 mL 3.6540 mL 7.3081 mL
10 mM 0.3654 mL 1.8270 mL 3.6540 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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