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Filipin III

Cat No.:V30460 Purity: ≥98%
Filipin III is the major component of Filipin, a 28-membered pentaene macrolide antifungal antibiotic generated by S.
Filipin III
Filipin III Chemical Structure CAS No.: 480-49-9
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes
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Product Description
Filipin III is the major component of Filipin, a 28-membered pentaene macrolide antifungal antibiotic generated by S. filipinensis, S. avermitilis and S. miharaensis. Filipin can interact with membrane sterols resulting in changes in membrane structure.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
Use the TBS-T carrier Filipin III working solution for cell staining. 50 μg/mL of Filipin III was applied to NCI-60 cancer cells while they were in the dark. Use TBS-T to wash the cells after one hour after viral loading. After that, the coverslips were removed and put in a mounting media that contained water. Using the particle size algorithm in the MetaXpress image analysis software (Molecular Devices Corp., Sunnyvale, CA), freezing levels were quantified while images were being captured with an Olympus Provis fluorescence microscope that had a 40X oil objective [2 Huang Y, et al. assessed the migration in relation to TSPAN-GFP's cholesterol enrichment. TSPAN4-GFP-expressing NRK cells were stabilized at 37 °C using 2 μg/mL Filipin III. Following a 15-minute treatment period, TSPAN4-GFP intensity on migrasomes (ItM), filipin III intensity on RFs (IpR), and filipin III intensity on migrasomes (IpM) were measured using confocal microscopy Z-stack images. In order to achieve staining findings, Fibroblast was subjected to 25 μg/ml Filipin III and incubated in the dark for 45 minutes (20°C) as described by Kwiatkowska K, et al. [4]. Tissue staining: Filipin has a strong affinity for cholesterol, but it photobleaches quickly and only produces adapted natural fluorescence in response to brief excitations, making it challenging to detect with confocal panels [5]. Reid PC et al. identified cholesterol buildup in neurons using Filipin III. For two hours, NPC cerebellar tissue was stained with Filipin III (125 μg/ml) while being shielded from light from the front and bottom. Wash the slides together with 0.5 M Tris in clear FBS, then use fluorescent stains for the counterstain. Day 22 saw the development of cholesterol buildup in Purkinje neuron cells. Alternatively, NPC images were stained with Filipin III. On day 22, most neurons showed signs of cholesterol accumulation in the axon hillock area [5]. Novak A et al. employed Filipin III to identify cholesterol accumulation in malignancies. To make a working solution containing 50 μg/mL, dissolve Filipin III in dimethyl sub-solution/PBS (1:4). And place it in front of the tissue slice in the following image. half an hour. The loaded slides were rinsed, and then an aqueous fluorescent mounting media was applied to seal them for observation [6].
References

[1]. Functional analysis of filipin tailoring genes from Streptomyces filipinensis reveals alternative routes in filipin III biosynthesis and yields bioactive derivatives. Microb Cell Fact. 2015 Aug 7;14:114.

[2]. Statin-induced mevalonate pathway inhibition attenuates the growth of mesenchymal-like cancer cells that lack functional E-cadherin mediated cell cohesion. Sci Rep. 2014 Dec 23;4:7593.

[3]. Migrasome formation is mediated by assembly of micron-scale tetraspanin macrodomains. Nat Cell Biol. 2019 Aug;21(8):991-1002.

[4]. Visualization of cholesterol deposits in lysosomes of Niemann-Pick type C fibroblasts using recombinant perfringolysin O. Orphanet J Rare Dis. 2014 Apr 28;9:64.

[5]. A novel cholesterol stain reveals early neuronal cholesterol accumulation in the Niemann-Pick type C1 mouse brain. J Lipid Res. 2004 Mar;45(3):582-91.

[6]. Role of the membrane cholesterol-glycosphingolipid complex as a ‘transistor’to regulate GSL receptor function and signaling of both lipids. bioRxiv, 2017: 137612.

Additional Infomation
A complex of polyene antibiotics obtained from Streptomyces filipinensis. Filipin III alters membrane function by interfering with membrane sterols, inhibits mitochondrial respiration, and is proposed as an antifungal agent. Filipins I, II, and IV are less important.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C35H58O11
Molecular Weight
654.82842
Exact Mass
654.397
CAS #
480-49-9
PubChem CID
5351457
Appearance
Light yellow to yellow solid powder
Density
1.2±0.1 g/cm3
Boiling Point
913.9±65.0 °C at 760 mmHg
Melting Point
163-180°C
Flash Point
279.3±27.8 °C
Vapour Pressure
0.0±0.6 mmHg at 25°C
Index of Refraction
1.536
LogP
-0.41
Hydrogen Bond Donor Count
9
Hydrogen Bond Acceptor Count
11
Rotatable Bond Count
5
Heavy Atom Count
46
Complexity
991
Defined Atom Stereocenter Count
0
SMILES
CCCCCC(C1C(CC(CC(CC(CC(CC(CC(/C(=C\C=C/C=C/C=C/C=C/C(C(OC1=O)C)O)/C)O)O)O)O)O)O)O)O
InChi Key
IMQSIXYSKPIGPD-JUDYZCJOSA-N
InChi Code
InChI=1S/C35H58O11/c1-4-5-11-16-31(42)34-33(44)22-29(40)20-27(38)18-25(36)17-26(37)19-28(39)21-32(43)23(2)14-12-9-7-6-8-10-13-15-30(41)24(3)46-35(34)45/h6-10,12-15,24-34,36-44H,4-5,11,16-22H2,1-3H3/b7-6+,10-8+,12-9-,15-13+,23-14-
Chemical Name
(17Z,19Z,21E,23E,25E)-4,6,8,10,12,14,16,27-octahydroxy-3-(1-hydroxyhexyl)-17,28-dimethyl-1-oxacyclooctacosa-17,19,21,23,25-pentaen-2-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.5271 mL 7.6356 mL 15.2711 mL
5 mM 0.3054 mL 1.5271 mL 3.0542 mL
10 mM 0.1527 mL 0.7636 mL 1.5271 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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