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Equisetin

Cat No.:V30068 Purity: ≥98%
Equisetin is an N-methylserine-derived acylteramic acid extracted from the terrestrial fungus Fusarium equiseti NRRL 5537.
Equisetin
Equisetin Chemical Structure CAS No.: 57749-43-6
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
Other Sizes
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Product Description
Equisetin is an N-methylserine-derived acylteramic acid extracted from the terrestrial fungus Fusarium equiseti NRRL 5537. As a quadruplex-containing naturally occurring compound, Equisetin has antibiotic and cytotoxic activities and can inhibit Gram-negative (Gram-) bacteria. Growth and HIV-1 integrase activity against Gram-positive (Gram+) bacteria but no activity against Gram-negative (Gram-) bacteria. Equisetin is a quorum sensing inhibitor (QSI) that can attenuate the QS-regulated virulence phenotype in Pseudomonas aeruginosa without affecting bacterial growth. It is the main compound for studying Pseudomonas aeruginosa infection.
Equisetin (CAS#: 57749-43-6) is an N-methylserine-derived acyl tetramic acid extracted from the terrestrial fungus Fusarium equiseti NRRL 5537. It has a molecular formula of C22H31NO4 and a molecular weight of 373.49. Equisetin has antibiotic and cytotoxic activities and can inhibit Gram-positive bacteria and HIV-1 integrase activity, but shows no activity against Gram-negative bacteria. It is also a quorum sensing inhibitor that attenuates virulence in Pseudomonas aeruginosa.
Biological Activity I Assay Protocols (From Reference)
Targets
Equisetin targets HIV-1 integrase, an enzyme essential for the integration of viral DNA into the host genome. It also targets bacterial cell wall synthesis or other essential processes in Gram-positive bacteria. As a quorum sensing inhibitor, equisetin attenuates the QS-regulated virulence phenotype in Pseudomonas aeruginosa without affecting bacterial growth. Its antibiotic activity is selective for Gram-positive bacteria.
ln Vitro
In vitro, equisetin inhibits the growth of Gram-positive bacteria and HIV-1 integrase activity but shows no activity against Gram-negative bacteria. As a quorum sensing inhibitor, it can attenuate the QS-regulated virulence phenotype in Pseudomonas aeruginosa without affecting bacterial growth. The compound's antibiotic and cytotoxic activities have been characterized in antimicrobial susceptibility assays and cell-based cytotoxicity assays.
ln Vivo
In vivo activity of equisetin has been demonstrated in models of Pseudomonas aeruginosa infection, where it attenuates virulence without affecting bacterial growth. As an antibiotic, its in vivo efficacy would be expected against Gram-positive bacterial infections. However, detailed in vivo data for equisetin are limited in the available literature. The compound is a natural product with potential applications in studying bacterial infections and quorum sensing.
Enzyme Assay
The in vitro antimicrobial assay for equisetin involves determining minimum inhibitory concentrations (MIC) against various bacterial strains. Bacterial cultures are grown in appropriate media and treated with varying concentrations of equisetin (typically 0.1-100 ug/mL) in 96-well plates. After incubation at 37degC for 18-24 hours, bacterial growth is assessed by measuring optical density at 600 nm or by viable colony counting. The MIC is determined as the lowest concentration that inhibits visible bacterial growth. For HIV-1 integrase inhibition, the compound is incubated with recombinant integrase and DNA substrates, and integrase activity is measured by gel electrophoresis or fluorescence-based assays.
Cell Assay
In vitro cellular assays for equisetin are conducted using cancer cell lines to assess its cytotoxic activity. Cells are seeded in 96-well plates and treated with varying concentrations of equisetin (typically 0.1-100 uM) for 24-72 hours. Cell viability is assessed using MTT, CellTiter-Glo, or crystal violet staining assays. Apoptosis is evaluated using Annexin V-FITC/PI double staining or by measuring caspase-3/7 activity. For quorum sensing studies, Pseudomonas aeruginosa cultures are treated with equisetin and virulence factor production (e.g., pyocyanin, elastase) is measured.
Animal Protocol
In vivo animal studies for equisetin typically involve administration to rodents in models of bacterial infection. The compound is administered by intraperitoneal or subcutaneous injection at doses determined from preliminary pharmacokinetic and tolerability studies. In models of Pseudomonas aeruginosa infection, the compound's ability to attenuate virulence and improve survival is assessed. Bacterial burden in tissues is measured by viable colony counting. Standard toxicology parameters including body weight and clinical observations are monitored.
ADME/Pharmacokinetics
Pharmacokinetic properties of equisetin have been partially characterized. The compound has a molecular weight of 373.49 and a molecular formula of C22H31NO4. It has a LogP of 2.959 and is soluble in DMSO at 1 mg/mL. The compound appears as a white to off-white solid powder. For storage, the powder should be kept at -20degC for up to 3 years, and solutions at -80degC for 6 months. Detailed ADME parameters are not extensively documented.
Toxicity/Toxicokinetics
The toxicological profile of equisetin has not been extensively characterized. As a natural product with antibiotic and cytotoxic activities, the compound may have effects on cell viability and proliferation. The compound is for research use only and is not intended for human therapeutic use. Standard safety precautions should be followed when handling the compound in a laboratory setting. No specific LD50 values have been reported.
References

[1]. Antibiotic produced by Fusarium equiseti NRRL 5537. Antimicrob Agents Chemother. 1974 Jun;5(6):634-9.

[2]. Equisetin, an antibiotic from Fusarium equiseti NRRL 5537, identified as a derivative of N-methyl-2, 4-pyrollidone. J Antibiot (Tokyo). 1979 Jul;32(7):759-61.

[3]. The hierarchy quorum sensing network in Pseudomonas aeruginosa. Protein Cell. 2015 Jan;6(1):26-41.

[4]. Equisetin as potential quorum sensing inhibitor of Pseudomonas aeruginosa. Biotechnol Lett. 2018 May;40(5):865-870.

Additional Infomation
Equisetin has been reported to be found in Fusarium heterospora, Fusarium equina, and other organisms with available data.
Equisetin (CAS 57749-43-6) is an N-methylserine-derived acyl tetramic acid from Fusarium equiseti NRRL 5537. It inhibits Gram-positive bacteria and HIV-1 integrase activity but shows no activity against Gram-negative bacteria. It is also a quorum sensing inhibitor that attenuates virulence in Pseudomonas aeruginosa. The compound is a research tool for studying bacterial infections and quorum sensing.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C₂₂H₃₁NO₄
Molecular Weight
373.49
Exact Mass
373.225
CAS #
57749-43-6
PubChem CID
54684703
Appearance
White to off-white solid powder
Density
1.187 g/cm3
Boiling Point
513.6ºC at 760 mmHg
Flash Point
264.4ºC
Index of Refraction
1.587
LogP
2.959
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
3
Heavy Atom Count
27
Complexity
722
Defined Atom Stereocenter Count
6
SMILES
C/C=C/[C@@H]1C=C[C@@H]2C[C@@H](CC[C@H]2[C@]1(C)/C(=C\3/C(=O)[C@@H](N(C3=O)C)CO)/O)C
InChi Key
QNQBPPQLRODXET-AIMHRHHOSA-N
InChi Code
InChI=1S/C22H31NO4/c1-5-6-15-9-8-14-11-13(2)7-10-16(14)22(15,3)20(26)18-19(25)17(12-24)23(4)21(18)27/h5-6,8-9,13-17,24,26H,7,10-12H2,1-4H3/b6-5+,20-18+/t13-,14-,15-,16-,17+,22-/m1/s1
Chemical Name
(3E,5S)-3-[[(1S,2R,4aS,6R,8aR)-1,6-dimethyl-2-[(E)-prop-1-enyl]-4a,5,6,7,8,8a-hexahydro-2H-naphthalen-1-yl]-hydroxymethylidene]-5-(hydroxymethyl)-1-methylpyrrolidine-2,4-dione
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.6774 mL 13.3872 mL 26.7745 mL
5 mM 0.5355 mL 2.6774 mL 5.3549 mL
10 mM 0.2677 mL 1.3387 mL 2.6774 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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