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Drp1-IN-1

Cat No.:V47400 Purity: ≥98%
Drp1-IN-1 (comp A-7) is an inhibitor (blocker/antagonist) of Drp1 protein with IC50 of 0.91 μM.
Drp1-IN-1
Drp1-IN-1 Chemical Structure CAS No.: 2247733-08-8
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
Other Sizes
Official Supplier of:
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Product Description
Drp1-IN-1 (comp A-7) is an inhibitor (blocker/antagonist) of Drp1 protein with IC50 of 0.91 μM.
Drp1-IN-1 (2247733-08-8, comp A-7) is a selective dynamin-1-like protein (Drp1) inhibitor, exhibiting an IC50 of 0.91 uM. It serves as a valuable chemical probe for studying mitochondrial fission and division, with potential applications in cancer, cardiovascular, and neurodegenerative disease research where Drp1-mediated mitochondrial dynamics are dysregulated.
Biological Activity I Assay Protocols (From Reference)
Targets
Target: Drp1 (dynamin-1-like protein, also known as DNM1L, IC50 = 0.91 uM). Drp1 is a large GTPase essential for mitochondrial and peroxisomal fission. By inhibiting Drp1, the compound blocks GTP hydrolysis, preventing the assembly of Drp1 oligomers around mitochondria and subsequent constriction, thereby preserving mitochondrial network integrity.
ln Vitro
In vitro, Drp1-IN-1 (comp A-7) inhibits Drp1 GTPase activity with an IC50 of 0.91 uM in cell-free enzyme assays. It is reported to block mitochondrial fragmentation induced by various stressors, reduce cytochrome c release, and decrease apoptosis in cultured neuronal and cardiac cells exposed to oxidative stress or ischemia-reperfusion injury.
ln Vivo
No in vivo efficacy data have been published specifically for Drp1-IN-1. However, Drp1 inhibitors in general have demonstrated in vivo efficacy in rodent models, including protection against myocardial ischemia-reperfusion injury, attenuation of acute kidney injury, reduced neuronal loss in models of Huntington's disease and traumatic brain injury, and suppression of tumor growth in cancer xenograft models.
Enzyme Assay
For cell-free Drp1 GTPase inhibition assays: recombinant human Drp1 protein (GTPase domain) is incubated with varying concentrations of Drp1-IN-1 (0-100 uM), 1 mM GTP, and assay buffer. The reaction is carried out at 37degC for 30-60 min, and inorganic phosphate released from GTP hydrolysis is measured using a malachite green colorimetric assay or 32P-GTP thin-layer chromatography. IC50 values are calculated from dose-response curves.
Cell Assay
For cell-based assays: cultured cells (e.g., HeLa, SH-SY5Y, H9c2 cardiomyocytes, primary neurons) are seeded in 96-well plates and treated with Drp1-IN-1 (1-50 uM, 2-24 h). Mitochondrial morphology is visualized by MitoTracker staining or immunofluorescence of outer mitochondrial membrane proteins (TOMM20). Image analysis (e.g., mitochondrial length, circularity, network fragmentation index) is performed using automated image analysis software to quantify Drp1 inhibition effects.
Animal Protocol
No in vivo animal studies have been specifically reported for Drp1-IN-1. Potential future studies would involve rodent models (e.g., middle cerebral artery occlusion (MCAO) stroke model, myocardial ischemia-reperfusion model, cancer xenografts) where Drp1-IN-1 would be administered intraperitoneally or intravenously at doses of 5-20 mg/kg daily for 1-14 days, with assessment of mitochondrial morphology in harvested tissues, biochemical markers of apoptosis, and functional outcomes (infarct volume, neurological scores, tumor volume).
ADME/Pharmacokinetics
No PK data are available for Drp1-IN-1. For small molecule Drp1 inhibitors (MW 448.54, solubility in DMSO 100 mg/mL), predicted PK properties in rodents: moderate oral bioavailability due to high molecular weight and lipophilicity, Tmax 1-2 h, plasma half-life 4-8 h. The compound is soluble in DMSO, and in vivo formulation may use DMSO:PEG300:Tween80:Saline (10:40:5:45).
Toxicity/Toxicokinetics
No toxicity data have been reported for Drp1-IN-1. Based on its mechanism of action, Drp1 inhibition in normal cells may lead to mitochondrial elongation and fusion, which is generally well-tolerated at moderate doses. However, complete Drp1 ablation is embryonically lethal in mice, and long-term pharmacological inhibition could cause metabolic disturbances or impaired mitophagy. No acute toxicity studies have been published.
References

[1]. DYNAMIN-1-LIKE PROTEIN INHIBITORS. Patent WO2018200674A1.

Additional Infomation
Drp1-IN-1 is a research compound not yet approved for clinical use. It is a valuable tool compound for studying mitochondrial fission and the role of Drp1 in various diseases, including cancer, cardiovascular disease (myocardial infarction, heart failure), neurodegenerative disorders (Alzheimer's, Parkinson's, Huntington's disease), and ischemia-reperfusion injury. It has potential as a lead compound for developing Drp1-targeted therapeutics but is currently in preclinical research only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C22H24N8OS
Molecular Weight
448.543961524963
Exact Mass
448.179
CAS #
2247733-08-8
PubChem CID
134817168
Appearance
Off-white to light yellow solid powder
LogP
3.4
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
6
Heavy Atom Count
32
Complexity
627
Defined Atom Stereocenter Count
0
SMILES
N1(CC2=CSC(N3CCCCC3)=N2)C=C(C)C=C1C(NC1=CC=C(C2=NNN=N2)C=C1)=O
InChi Key
QNOOJEJAIFNEBQ-UHFFFAOYSA-N
InChi Code
InChI=1S/C22H24N8OS/c1-15-11-19(21(31)23-17-7-5-16(6-8-17)20-25-27-28-26-20)30(12-15)13-18-14-32-22(24-18)29-9-3-2-4-10-29/h5-8,11-12,14H,2-4,9-10,13H2,1H3,(H,23,31)(H,25,26,27,28)
Chemical Name
4-methyl-1-[(2-piperidin-1-yl-1,3-thiazol-4-yl)methyl]-N-[4-(2H-tetrazol-5-yl)phenyl]pyrrole-2-carboxamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~222.95 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.2295 mL 11.1473 mL 22.2946 mL
5 mM 0.4459 mL 2.2295 mL 4.4589 mL
10 mM 0.2229 mL 1.1147 mL 2.2295 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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