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Demecycline

Demecycline, a tetracycline antibiotic, is the C6 demethyl analogue of tetracycline, which can fight bacterial infections like pneumonia and other respiratory infections.
Demecycline
Demecycline Chemical Structure CAS No.: 987-02-0
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Demecycline, a tetracycline antibiotic, is the C6 demethyl analogue of tetracycline, which can fight bacterial infections like pneumonia and other respiratory infections.
Demecycline (CAS# 987-02-0) is a tetracycline antibiotic and the C6-demethylated derivative of tetracycline. It has a molecular weight of 430.41 and a chemical formula of C₂₁H₂₂N₂O₈. Demecycline is effective against bacterial infections, including pneumonia and other respiratory tract infections. The compound inhibits the growth of bacteria by binding to the bacterial ribosome and blocking protein synthesis. It is structurally related to tetracycline and shares a similar mechanism of action. Demecycline has been used in the treatment of inflammatory diseases such as arthritis. As a tetracycline antibiotic, it exhibits broad-spectrum antibacterial activity against both Gram-positive and Gram-negative bacteria. The compound is a research-grade antibiotic intended for laboratory use.
Biological Activity I Assay Protocols (From Reference)
Targets
The primary target of demecycline is the bacterial ribosome, specifically the 30S ribosomal subunit. Tetracyclines, including demecycline, bind to the 16S rRNA of the 30S ribosomal subunit, blocking the binding of aminoacyl-tRNA to the acceptor (A) site on the ribosome-mRNA complex. This prevents the addition of new amino acids to the growing peptide chain, effectively inhibiting bacterial protein synthesis. By inhibiting protein synthesis, demecycline exerts bacteriostatic activity, stopping bacterial growth and allowing the host immune system to clear the infection. The compound's mechanism of action is shared among tetracycline antibiotics, and its C6-demethylated structure may confer slightly different pharmacokinetic or antibacterial properties compared to tetracycline.
ln Vitro
In vitro, demecycline demonstrates broad-spectrum antibacterial activity against a variety of Gram-positive and Gram-negative bacteria. It is effective against bacterial infections including pneumonia and other respiratory tract infections. The compound's antibacterial activity is typically assessed using standard broth microdilution assays to determine minimum inhibitory concentrations (MICs) against a panel of bacterial strains. Demecycline's activity against tetracycline-resistant strains may vary depending on the resistance mechanism, as some resistance mechanisms such as efflux pumps or ribosomal protection proteins may affect its efficacy. The compound's in vitro activity is similar to other tetracyclines, and its C6-demethylated structure may influence its antibacterial spectrum and potency.
ln Vivo
In vivo, demecycline has been used to treat bacterial infections, including pneumonia and other respiratory tract infections. The compound has also been used in the treatment of inflammatory diseases such as arthritis, where its anti-inflammatory properties may contribute to therapeutic efficacy in addition to its antibacterial effects. As a tetracycline antibiotic, demecycline is typically administered orally or intravenously, depending on the severity of the infection. Its ability to distribute to various tissues, including the respiratory tract and joints, makes it effective for these indications. The compound's in vivo efficacy has been demonstrated in clinical and preclinical studies, although it is not as widely used as other tetracyclines in current clinical practice.
Enzyme Assay
In vitro antibacterial susceptibility testing for demecycline follows standard protocols established by clinical microbiology laboratories. The broth microdilution method is commonly used, where bacterial cultures are grown in 96-well plates containing serial dilutions of the antibiotic. After incubation at 37°C for 16-24 hours, the minimum inhibitory concentration (MIC) is determined as the lowest concentration of the antibiotic that inhibits visible bacterial growth. The compound's activity can also be assessed using disk diffusion (Kirby-Bauer) methods, where antibiotic-impregnated disks are placed on agar plates inoculated with bacteria, and the zone of inhibition is measured. These assays are standard for characterizing the antibacterial activity of demecycline and other antibiotics.
Cell Assay
In vitro cell-based assays for demecycline are not typically performed, as the compound's mechanism of action is direct antibacterial activity rather than effects on eukaryotic cells. However, cytotoxicity assays using mammalian cell lines can be conducted to assess the compound's safety profile and potential for off-target effects. These assays involve treating cells with varying concentrations of demecycline and measuring cell viability using standard assays such as MTT or LDH release. Additionally, the compound's anti-inflammatory properties can be assessed in cell-based models of inflammation, such as measuring cytokine production in stimulated immune cells. These assays provide additional data on the compound's biological activity beyond its antibacterial effects.
Animal Protocol
In vivo animal studies for demecycline are conducted to evaluate its antibacterial efficacy and pharmacokinetic properties. Standard efficacy studies involve infecting animals (typically mice or rats) with a bacterial pathogen and then treating them with demecycline via oral or parenteral administration. Endpoints include survival, bacterial load in target tissues (such as lungs for pneumonia models), and clinical signs of infection. Pharmacokinetic studies assess the compound's absorption, distribution, metabolism, and excretion in animal models. These studies are essential for determining appropriate dosing regimens and for understanding the compound's behavior in vivo. The compound's efficacy in animal models of infection supports its clinical use.
ADME/Pharmacokinetics
Demecycline has a molecular weight of 430.41 and a chemical formula of C₂₁H₂₂N₂O₈. As a tetracycline antibiotic, it is typically administered orally or intravenously. The compound is well-absorbed after oral administration and distributes widely to various tissues and body fluids, including the respiratory tract, where it is effective for treating pneumonia. Demecycline is bound to plasma proteins and is excreted primarily in urine and bile. Its half-life is similar to other tetracyclines, and it accumulates in bones and teeth, which is a consideration for use in children and pregnant women. The compound's C6-demethylated structure may influence its lipophilicity and tissue distribution compared to tetracycline.
Toxicity/Toxicokinetics
Demecycline is generally well-tolerated, with a safety profile similar to other tetracycline antibiotics. Common side effects include gastrointestinal disturbances such as nausea, vomiting, and diarrhea. As with other tetracyclines, demecycline can cause photosensitivity, and patients should avoid prolonged sun exposure. The compound can also cause discoloration of teeth and inhibit bone growth in children, limiting its use in pediatric patients. Hypersensitivity reactions, including rash and anaphylaxis, are rare but possible. The compound should be used with caution in patients with renal or hepatic impairment. Demecycline is classified as a pregnancy category D drug due to its effects on fetal bone and tooth development.
Additional Infomation
6-Demethyltetracycline belongs to the tetracycline class of antibiotics.
Demecycline (CAS# 987-02-0) is a tetracycline antibiotic and the C6-demethylated derivative of tetracycline. It has a molecular weight of 430.41. The compound inhibits bacterial protein synthesis by binding to the 30S ribosomal subunit. Demecycline is effective against bacterial infections including pneumonia and other respiratory tract infections. It has also been used in the treatment of inflammatory diseases such as arthritis. The compound is not as widely used as other tetracyclines in current clinical practice. It has not received FDA approval for any indication and is primarily a research-grade compound.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C21H22N2O8
Molecular Weight
430.40798
Exact Mass
430.138
CAS #
987-02-0
PubChem CID
54682469
Appearance
Light brown to brown solid powder
Density
1.69g/cm3
Boiling Point
693.5ºC at 760mmHg
Flash Point
373.2ºC
Index of Refraction
1.757
LogP
0.761
Hydrogen Bond Donor Count
6
Hydrogen Bond Acceptor Count
9
Rotatable Bond Count
2
Heavy Atom Count
31
Complexity
924
Defined Atom Stereocenter Count
5
SMILES
CN(C)[C@H]1[C@@H]2C[C@@H]3[C@@H](c4cccc(c4C(=O)C3=C([C@@]2(C(=O)C(=C1O)C(=O)N)O)O)O)O
InChi Key
RMVMLZHPWMTQGK-SOUFLCLCSA-N
InChi Code
InChI=1S/C21H22N2O8/c1-23(2)14-9-6-8-12(16(26)11-7(15(8)25)4-3-5-10(11)24)18(28)21(9,31)19(29)13(17(14)27)20(22)30/h3-5,8-9,14-15,24-26,29,31H,6H2,1-2H3,(H2,22,30)/t8-,9-,14-,15+,21-/m0/s1
Chemical Name
(4S,4aS,5aS,6S,12aR)-4-(dimethylamino)-1,6,10,11,12a-pentahydroxy-3,12-dioxo-4a,5,5a,6-tetrahydro-4H-tetracene-2-carboxamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.3234 mL 11.6168 mL 23.2337 mL
5 mM 0.4647 mL 2.3234 mL 4.6467 mL
10 mM 0.2323 mL 1.1617 mL 2.3234 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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