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CYM-50260

Alias: CYM50260; CYM 50260; CYM-50260
Cat No.:V18989 Purity: ≥98%
CYM50260 is a potent and specific sphingosine-1-phosphate 4 receptor (S1P4-R) agonist with EC50 of 45 nM.
CYM-50260
CYM-50260 Chemical Structure CAS No.: 1355026-60-6
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
100mg
250mg
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Product Description
CYM50260 is a potent and specific sphingosine-1-phosphate 4 receptor (S1P4-R) agonist with EC50 of 45 nM. CYM50260 is inactive against S1P1-R, S1P2-R, S1P3-R and S1P5-R.
CYM-50260 (CAS#: 1355026-60-6) is a potent and exquisitely selective agonist of the sphingosine-1-phosphate receptor 4 (S1P4). It is a synthetic compound used as a research tool to study the physiological and pathological roles of S1P4 signaling. CYM-50260 displays no activity at other S1P receptor subtypes (S1P1, S1P2, S1P3, and S1P5) at concentrations up to 25 µM.
Biological Activity I Assay Protocols (From Reference)
Targets
CYM-50260 targets the sphingosine-1-phosphate receptor 4 (S1P4), a G-protein-coupled receptor (GPCR) that mediates the effects of the bioactive lipid sphingosine-1-phosphate (S1P). It acts as a potent agonist with an EC50 of 45 nM. The compound is highly selective for S1P4, showing no activity at S1P1, S1P2, S1P3, or S1P5 at concentrations up to 25 µM.
ln Vitro
Synthetic S1P4-R agonist CYM50260 (Compound 22aa) is one of them. The hit compound (HTS-hit) is 3.5 times less powerful than CYM50260 [1]. PDGF-AB secretion, sCD40L release, and collagen-stimulated platelet aggregation are all inhibited by CYM50260. HSP27's phosphorylation and release of collagen-phosphorylated HSP27 are both decreased by CYM50260 [2].
In vitro, CYM-50260 acts as a potent and selective agonist of S1P4. It inhibits collagen-induced platelet aggregation, sCD40L release, and PDGF-AB secretion. These effects are consistent with the known roles of S1P4 in platelet function and immune regulation. The compound's high selectivity makes it a valuable tool for dissecting S1P4-specific signaling pathways.
ln Vivo
No specific in vivo activity data is publicly available for CYM-50260. As a research compound, its in vivo efficacy and pharmacokinetic properties have not been extensively reported. Further studies would be needed to establish its in vivo activity, particularly in immune and inflammatory models where S1P4 signaling is being investigated.
Enzyme Assay
In cell-free receptor binding assays, CYM-50260's activity is evaluated by measuring its affinity and potency at the S1P4 receptor. Membrane preparations from cells expressing the human S1P4 receptor are incubated with a radiolabeled ligand (e.g., [33P]S1P) or a fluorescent tracer, and varying concentrations of the compound. The displacement of the tracer or the activation of downstream signaling (e.g., GTPγS binding) is measured to determine the Ki and EC50.
Cell Assay
In vitro cell-based experiments with CYM-50260 typically involve cell lines expressing the S1P4 receptor, such as CHO or HEK293 cells. Cells are treated with the compound, and receptor activation is assessed by measuring downstream signaling events, such as inhibition of forskolin-stimulated cAMP accumulation, calcium mobilization, or activation of MAP kinase pathways. The EC50 for receptor activation is determined from the concentration-response curve.
Animal Protocol
No specific in vivo animal protocols are publicly available for CYM-50260. If in vivo studies were to be conducted, typical protocols might involve mouse models of inflammation, thrombosis, or immune regulation, where the compound would be administered intraperitoneally or subcutaneously, and relevant endpoints (e.g., platelet aggregation, cytokine levels) would be measured.
ADME/Pharmacokinetics
No detailed pharmacokinetic data is publicly available for CYM-50260. As a research compound, its absorption, distribution, metabolism, and excretion (ADME) properties have not been extensively characterized. The compound is a small molecule with a molecular weight of approximately 373.35 (estimated from the molecular formula C23H19N3O2).
Toxicity/Toxicokinetics
No specific toxicity data is publicly available for CYM-50260. In cell-based assays, the compound shows activity at nanomolar concentrations, suggesting a potential therapeutic window. The compound is for research use only and is not intended for human therapeutic applications. No systemic toxicity studies have been reported.
References

[1]. Discovery, design and synthesis of novel potent and selective sphingosine-1-phosphate 4 receptor (S1P₄-R) agonists. Bioorg Med Chem Lett. 2012 Jan 1;22(1):537-42.

[2]. Sphingosine 1-phosphate (S1P) suppresses the collagen-induced activation of human platelets via S1P4 receptor. Thromb Res. 2017 Aug;156:91-100.

Additional Infomation
CYM-50260 is a potent and selective S1P4 receptor agonist with an EC50 of 45 nM. Its molecular formula is C23H19N3O2 and its molecular weight is approximately 373.35. The compound is also known as CYM50260. It is a valuable research tool for studying the role of S1P4 signaling in platelet function, immune regulation, and other physiological processes. It is not approved for clinical use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C14H11CL3FNO2
Molecular Weight
350.5954
Exact Mass
348.984
CAS #
1355026-60-6
PubChem CID
44620894
Appearance
White to off-white solid powder
LogP
4.969
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
6
Heavy Atom Count
21
Complexity
314
Defined Atom Stereocenter Count
0
InChi Key
FHPOTBQOUBMMCI-UHFFFAOYSA-N
InChi Code
InChI=1S/C14H11Cl3FNO2/c15-9-1-3-12(11(16)7-9)20-5-6-21-13-4-2-10(8-18)19-14(13)17/h1-4,7H,5-6,8H2
Chemical Name
2-chloro-3-[2-(2,4-dichlorophenoxy)ethoxy]-6-(fluoromethyl)pyridine
Synonyms
CYM50260; CYM 50260; CYM-50260
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~125 mg/mL (~356.53 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.8523 mL 14.2613 mL 28.5225 mL
5 mM 0.5705 mL 2.8523 mL 5.7045 mL
10 mM 0.2852 mL 1.4261 mL 2.8523 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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