yingweiwo

Cyclen

Cat No.:V31036 Purity: ≥98%
Cyclen is the macrocyclicaza analogue of crown ether, used as a precursor for MRI contrast agents, and is an intermediate for the preparation of effective macrocyclic chelates.
Cyclen
Cyclen Chemical Structure CAS No.: 294-90-6
Product category: New12
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
250mg
500mg
5g
50g
Other Sizes
Official Supplier of:
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text

 

  • Business Relationship with 5000+ Clients Globally
  • Major Universities, Research Institutions, Biotech & Pharma
  • Citations by Top Journals: Nature, Cell, Science, etc.
Top Publications Citing lnvivochem Products
Product Description

Cyclen is the macrocyclic aza analogue of crown ether, used as a precursor for MRI contrast agents, and is an intermediate for the preparation of effective macrocyclic chelates. Cyclen compounds are capable of selectively binding cations and are used as a ligand with chemicals used in MRI contrast (as well as other imaging) agents.

Biological Activity I Assay Protocols (From Reference)
Targets
- Water molecules (as Cyclen-based Gd³⁺ complexes act by shortening the relaxation time of water protons for MRI contrast enhancement) [1]
ln Vitro
- Cyclen-based Gd³⁺ complexes exhibited enhanced longitudinal relaxation rates (r1) compared to clinically used MRI contrast agents (e.g., Gd-DTPA). The r1 values ranged from 3.0 to 10.5 mM⁻¹s⁻¹ at 1.5 T and 37°C, depending on the structural modifications of the Cyclen ligand (e.g., introduction of hydrophilic groups, rigidifying moieties, or targeting ligands) [1]
- Cytotoxicity assays showed that most Cyclen-based Gd³⁺ complexes had low toxicity against mammalian cell lines (e.g., HeLa, HepG2, L929), with IC50 values greater than 100 μM after 24–72 h of incubation [1]
- Cell uptake experiments demonstrated that Cyclen complexes modified with cell-penetrating peptides or receptor-targeting ligands showed increased internalization into specific cell types, as determined by ICP-MS analysis of intracellular Gd content [1]
- The water exchange rate (kex) of Cyclen-Gd³⁺ complexes was measured to be in the range of 10⁶–10⁷ s⁻¹, which is optimal for efficient T1 relaxation enhancement [1]
ln Vivo
- In Balb/c mice, intravenous injection of Cyclen-based Gd³⁺ complexes (0.1 mmol Gd/kg body weight) resulted in significant T1-weighted MRI signal enhancement in the kidneys, liver, and blood vessels within 5–30 min post-administration. The signal enhancement persisted for 2–4 h, depending on the ligand structure [1]
- Tumor-bearing nude mice (xenograft models) injected with targeted Cyclen-Gd³⁺ complexes (modified with RGD peptide or folate) showed enhanced MRI contrast in tumor tissues compared to non-targeted Cyclen complexes, with a tumor-to-muscle signal ratio increased by 2–3 folds [1]
- Biodistribution studies revealed that Cyclen-Gd³⁺ complexes were mainly accumulated in the kidneys and rapidly cleared via the renal pathway, with minimal retention in the liver and other organs [1]
Cell Assay
- Cytotoxicity assay: Mammalian cells were seeded in 96-well plates at a density of 5×10³ cells per well and incubated overnight. Serial dilutions of Cyclen-based Gd³⁺ complexes (0.1–500 μM Gd) were added to the wells, and the cells were cultured for 24, 48, or 72 h. A cell viability reagent was added, and the absorbance was measured to calculate the survival rate and IC50 values [1]
- Cell uptake assay: Cells were seeded in 6-well plates and incubated with Cyclen-Gd³⁺ complexes (50 μM Gd) for 1–4 h. After washing with PBS to remove unbound complexes, the cells were lysed, and the intracellular Gd concentration was quantified by ICP-MS to determine the uptake efficiency [1]
- Fluorescence imaging assay: Cyclen ligands conjugated with fluorescent dyes were complexed with Gd³⁺, and the complexes were incubated with cells. Fluorescence microscopy was used to observe the cellular localization and internalization of the complexes [1]
Animal Protocol
- MRI imaging in normal mice: Balb/c mice (20–25 g) were anesthetized and injected intravenously via the tail vein with Cyclen-based Gd³⁺ complexes (0.1 mmol Gd/kg body weight). T1-weighted MRI scans were performed at 0, 5, 15, 30, 60, 120, and 240 min post-injection to monitor signal enhancement in various organs [1]
- Tumor imaging in nude mice: Nude mice bearing subcutaneous xenograft tumors (50–100 mm³) were injected intravenously with targeted or non-targeted Cyclen-Gd³⁺ complexes (0.1 mmol Gd/kg body weight). MRI scans were conducted at different time points to evaluate tumor contrast enhancement [1]
- Biodistribution study: Mice were sacrificed 24 h after injection of Cyclen-Gd³⁺ complexes. Major organs (kidneys, liver, spleen, heart, lungs, tumor) were collected, weighed, and digested. The Gd concentration in each organ was measured by ICP-MS to calculate the tissue distribution profile [1]
- Acute toxicity study: Mice were injected intravenously with a high dose of Cyclen-Gd³⁺ complexes (0.5 mmol Gd/kg body weight) and monitored for 14 days. Body weight changes, clinical signs of toxicity, and organ histopathology were evaluated [1]
ADME/Pharmacokinetics
The blood clearance half-life (t1/2β) of Cyclen-based Gd³⁺ complexes is 0.8 to 2.5 hours, with renal clearance being the primary elimination pathway [1]. Biodistribution data show that Gd accumulates most in the kidneys (15-30 μg Gd/g tissue 1 hour after injection), followed by the liver (2-5 μg Gd/g tissue), while accumulation in other organs (heart, lungs, spleen) is minimal (<2 μg Gd/g tissue) [1]. Within 24 hours after injection, the urinary excretion rate of Gd is 60-85%, indicating that Cyclen-Gd³⁺ complexes have high renal clearance efficiency [1]. The plasma protein binding rate of Cyclen-Gd³⁺ complexes is low (5-15%), as determined by ultrafiltration assay [1].
Toxicity/Toxicokinetics
In vitro cytotoxicity: The Cyclen-based Gd³⁺ complex showed low toxicity to HeLa, HepG2, and L929 cells, with IC50 values >100 μM (24-hour incubation) and >200 μM (72-hour incubation) [1]
- Acute in vivo toxicity: In mice, no death or significant clinical signs of toxicity (e.g., lethargy, loss of appetite) were observed after administration of the Cyclen-Gd³⁺ complex at doses up to 0.5 mmol Gd/kg body weight for 14 consecutive days [1]
- No significant abnormalities were observed in liver and kidney function tests (ALT, AST, BUN, creatinine) in the treatment group compared to the control group [1]
- Histopathological examination of the kidneys, liver, and other organs showed no significant tissue damage or inflammation of the Cyclen-Gd³⁺ complex [1]
References

[1]. Cyclen-based Gd3+ complexes as MRI contrast agents: Relaxivity enhancement and ligand design. Bioorg Med Chem. 2016 Nov 15;24(22):5663-5684.

Additional Infomation
1,4,7,10-Tetraazacyclododecane is an azacycloalkane, a cyclododecane in which carbon atoms at positions 1, 4, 7, and 10 are replaced by nitrogen atoms. It is a saturated organic heteromonocyclic parent compound, a crown amine, and an azacycloalkane. Cyclen (1,4,7,10-tetraazacyclododecane) is a macrocyclic ligand that forms a stable octate complex with Gd³⁺ ions [1]. The mechanism by which Cyclen-based Gd³⁺ complexes enhance MRI contrast involves the exchange of water molecules between the complex and the bulk solution, thereby shortening the longitudinal (T1) and transverse (T2) relaxation times of water protons [1]. Ligand design strategies for Cyclen include introducing hydrophilic groups (e.g., carboxyl groups, hydroxyl groups) to improve water solubility, rigidifying the macrocyclic structure to optimize the water exchange rate, and coupling with targeting groups (e.g., RGD peptides, folic acid) to enhance tissue-specific accumulation [1]. Cycloene-based Gd³⁺ complexes have advantages over clinical contrast agents, such as higher relaxation rates, better stability, and lower toxicity, making them ideal candidates for diagnostic MRI applications. [1]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C8H20N4
Molecular Weight
172.2712
Exact Mass
172.168
CAS #
294-90-6
PubChem CID
64963
Appearance
White to off-white solid powder
Density
0.9±0.1 g/cm3
Boiling Point
283.8±8.0 °C at 760 mmHg
Melting Point
110-113 °C(lit.)
Flash Point
129.5±13.5 °C
Vapour Pressure
0.0±0.6 mmHg at 25°C
Index of Refraction
1.424
LogP
-2.34
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
0
Heavy Atom Count
12
Complexity
65.1
Defined Atom Stereocenter Count
0
InChi Key
QBPPRVHXOZRESW-UHFFFAOYSA-N
InChi Code
InChI=1S/C8H20N4/c1-2-10-5-6-12-8-7-11-4-3-9-1/h9-12H,1-8H2
Chemical Name
1,4,7,10-tetrazacyclododecane
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: (1). This product requires protection from light (avoid light exposure) during transportation and storage.  (2). Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
H2O : ~50 mg/mL (~290.24 mM)
DMSO : ~1.85 mg/mL (~10.74 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
View More

Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
View More

Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 5.8048 mL 29.0242 mL 58.0484 mL
5 mM 1.1610 mL 5.8048 mL 11.6097 mL
10 mM 0.5805 mL 2.9024 mL 5.8048 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
+
+
+

Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Contact Us