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Clothianidin-d3

Cat No.:V45484 Purity: ≥98%
Clothianidin-d3 is the deuterium labelled form of Clothianidin.
Clothianidin-d3
Clothianidin-d3 Chemical Structure CAS No.: 1262776-24-8
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
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50mg
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Other Forms of Clothianidin-d3:

  • Clothianidin
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
Clothianidin-d3 is the deuterium labelled form of Clothianidin. Clothianidin-d3 is a nicotinic insecticide. Clothianidin-d3 has good low-dose long-term control effect against a variety of pests of the Coleoptera, Thoracoptera, Lepidoptera, Diptera, Homoptera, Heteroptera, Orthoptera and Isoptera families. Clothianidin-d3 has diverse application methods and is highly safe for crops.
Clothianidin-d3 is a deuterium-labeled analog of the neonicotinoid insecticide clothianidin. In clothianidin-d3, three hydrogen atoms are replaced with deuterium atoms, providing a stable isotope-labeled compound suitable for use as an internal standard in mass spectrometry-based analytical methods. Clothianidin is a systemic insecticide that acts on the nicotinic acetylcholine receptor (nAChR) in insects. The deuterated analog, clothianidin-d3, retains the same chemical structure and biological activity as the parent compound but has a distinct mass that allows for its differentiation in mass spectrometric analysis.
Biological Activity I Assay Protocols (From Reference)
Targets
Clothianidin-d3 targets the nicotinic acetylcholine receptor (nAChR) in insects, specifically the insect nAChR subtypes that are sensitive to neonicotinoid insecticides. As a deuterated analog of clothianidin, it retains the same mechanism of action as the parent compound. Clothianidin acts as an agonist at insect nAChRs, binding to the receptor and causing overstimulation of the nervous system, leading to paralysis and death of the insect. The deuterium substitution does not alter the primary pharmacological target but serves as a tracer for analytical purposes.
ln Vitro
On isolated neurons, clothianidin-d3 (30 nM) shows significant action [3]. Larvae of monarch butterflies exposed to milkweed (1 µg/L; 36 h) exhibit sublethal effects from clothianidin-d3 [4]. Fields grown with maize and soybeans have low quantities of clothianidin-d3 (0.25 mg/grain and 0.50 mg/grain) in the soil and water [5].
Clothianidin-d3 exhibits insecticidal activity against a broad spectrum of insect pests, consistent with the activity profile of the parent compound clothianidin. Its in vitro activity is typically evaluated using standard insecticide bioassays, where the compound's ability to cause mortality or behavioral effects in target insects is assessed. The compound's affinity for insect nAChRs can be measured using radioligand binding assays with membrane preparations from insect brains. However, as a deuterated internal standard, clothianidin-d3 is not typically used for pharmacological evaluation of insecticidal activity.
ln Vivo
Clothianidin-d3 is not typically studied as a therapeutic entity for in vivo activity, as its primary use is as an analytical internal standard. However, as a deuterated analog of clothianidin, it would be expected to exhibit similar in vivo insecticidal efficacy to the parent compound when applied to target insect species. Clothianidin is a widely used neonicotinoid insecticide that is effective against a variety of agricultural pests, including aphids, whiteflies, and beetles.
Enzyme Assay
Non-cellular assays for clothianidin-d3 are not typically performed for pharmacological evaluation. Instead, the compound is used as an internal standard in LC-MS/MS methods for quantifying clothianidin concentrations in various matrices such as agricultural products, environmental samples, and biological specimens. Sample preparation involves extraction of clothianidin from the matrix, followed by clean-up using solid-phase extraction. The extracted sample is spiked with a known amount of clothianidin-d3, and the mixture is analyzed by LC-MS/MS using selected reaction monitoring (SRM) transitions specific to the deuterated compound.
Cell Assay
In vitro cellular assays for clothianidin-d3 are not typically conducted for pharmacological evaluation. The compound is used as an analytical standard rather than as a biological tool. Its application is limited to the development and validation of analytical methods for the quantification of clothianidin residues. The compound may be used in cell-based studies as a tracer for clothianidin uptake or metabolism, but such applications are not standard.
Animal Protocol
Clothianidin-d3 is not used in in vivo animal studies as a pharmacological agent. Its application in animal research is limited to its use as an internal standard for the analysis of clothianidin residues in biological samples collected from animals exposed to the insecticide. For example, in toxicokinetic or residue depletion studies, blood or tissue samples from dosed animals are spiked with clothianidin-d3 during sample preparation to enable accurate quantification of clothianidin by LC-MS/MS.
ADME/Pharmacokinetics
Pharmacokinetic properties of clothianidin-d3 are expected to be nearly identical to those of the parent compound clothianidin due to the minor isotopic substitution. Clothianidin is rapidly absorbed after oral administration and is widely distributed in the body. It is metabolized in the liver via cytochrome P450-mediated oxidation and reduction, and metabolites are excreted primarily in the urine. The elimination half-life of clothianidin varies depending on the species and route of administration. The deuterium labeling does not significantly affect the pharmacokinetic properties of the compound.
Toxicity/Toxicokinetics
The deuterium-labeled clothianidin-d3 is stable and non-toxic at the trace concentrations used as an internal standard. The parent compound clothianidin is a neonicotinoid insecticide that is toxic to insects but has relatively low acute toxicity to mammals. However, clothianidin has been associated with adverse effects on non-target organisms including bees and other pollinators. In mammals, high doses may cause neurotoxicity due to nAChR activation. Clothianidin-d3 itself is not administered at therapeutic doses for toxicity evaluation, as its use is limited to analytical applications.
References

[1]. Impact of Deuterium Substitution on the Pharmacokinetics of Pharmaceuticals. Ann Pharmacother. 2019 Feb;53(2):211-216.

[2]. Uneme H. Chemistry of clothianidin and related compounds. J Agric Food Chem. 2011 Apr 13;59(7):2932-7.

[3]. Thiamethoxam is a neonicotinoid precursor converted to clothianidin in insects and plants. Pesticide biochemistry and physiology, 2003, 76(2): 55-69.

[4]. Non-target effects of clothianidin on monarch butterflies. Naturwissenschaften. 2015 Apr;102(3-4):19.

[5]. Fate and effects of clothianidin in fields using conservation practices. Environ Toxicol Chem. 2015 Feb;34(2):258-65.

Additional Infomation
Clothianidin-d3 is a research-grade stable isotope-labeled compound intended for laboratory use as an analytical internal standard. It is not approved for clinical use as a therapeutic agent. Its CAS number is 1262776-24-8. The primary application of clothianidin-d3 is in analytical chemistry for the quantification of clothianidin residues in agricultural products, environmental samples, and biological specimens using LC-MS/MS. The compound is also used in metabolism studies to trace the fate of clothianidin in plants and animals. Clothianidin-d3 is a valuable tool for food safety testing, environmental monitoring, and pesticide residue analysis.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C6H8CLN5O2S
Molecular Weight
249.678017616272
Exact Mass
252.027
CAS #
1262776-24-8
Related CAS #
Clothianidin;210880-92-5
PubChem CID
136257761
Appearance
White to off-white solid powder
Density
1.7±0.1 g/cm3
Boiling Point
435.2±55.0 °C at 760 mmHg
Flash Point
217.0±31.5 °C
Vapour Pressure
0.0±1.0 mmHg at 25°C
Index of Refraction
1.709
LogP
-0.15
Hydrogen Bond Donor Count
2
Rotatable Bond Count
4
Heavy Atom Count
15
Complexity
258
Defined Atom Stereocenter Count
0
SMILES
[2H]C([2H])([2H])N/C(=N\\[N+](=O)[O-])/NCC1=CN=C(S1)Cl
InChi Key
PGOOBECODWQEAB-FIBGUPNXSA-N
InChi Code
InChI=1S/C6H8ClN5O2S/c1-8-6(11-12(13)14)10-3-4-2-9-5(7)15-4/h2H,3H2,1H3,(H2,8,10,11)/i1D3
Chemical Name
1-[(2-chloro-1,3-thiazol-5-yl)methyl]-2-nitro-3-(trideuteriomethyl)guanidine
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.0051 mL 20.0256 mL 40.0513 mL
5 mM 0.8010 mL 4.0051 mL 8.0103 mL
10 mM 0.4005 mL 2.0026 mL 4.0051 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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