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Chlorophenol red-β-D-galactopyranoside

Cat No.:V45540 Purity: ≥98%
Chlorophenol red-β-D-galactopyranoside is a long wavelength dye extensively used in colorimetric assays.
Chlorophenol red-β-D-galactopyranoside
Chlorophenol red-β-D-galactopyranoside Chemical Structure CAS No.: 99792-79-7
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Chlorophenol red-β-D-galactopyranoside is a long wavelength dye extensively used in colorimetric assays. Chlorophenol red-β-D-galactopyranoside is also a β-galactosidase substrate and is widely used in recombinant yeast estrogen assays.
Chlorophenol red-β-D-galactopyranoside (CPRG) is a chromogenic substrate for the enzyme β-galactosidase. It has the molecular formula C₂₄H₁₈Cl₂O₁₀S and a molecular weight of 569.37. CPRG is a colorless or pale yellow compound that, upon cleavage by β-galactosidase, releases chlorophenol red, a red-colored dye with an absorbance maximum at approximately 574-595 nm. CPRG is widely used in biochemical and molecular biology research as a substrate for β-galactosidase reporter assays, including the detection of β-galactosidase activity in cell lysates, bacterial colonies, and histochemical staining.
Biological Activity I Assay Protocols (From Reference)
Targets
Chlorophenol red-β-D-galactopyranoside (CPRG) targets the enzyme β-galactosidase (β-gal), a glycoside hydrolase that catalyzes the hydrolysis of β-D-galactosides. β-Galactosidase is a common reporter enzyme used in molecular biology to monitor gene expression, as it is encoded by the lacZ gene. CPRG is a substrate for β-galactosidase; the enzyme cleaves the glycosidic bond of CPRG, releasing the chromophore chlorophenol red. The enzymatic activity of β-galactosidase can be measured by the color change from colorless to red. CPRG does not have a biological target in the traditional pharmacological sense; its utility is as a substrate for enzyme assays.
ln Vitro
Chlorophenol red-β-D-galactopyranoside (CPRG) is a chromogenic substrate that is colorless or pale yellow in its intact form. Upon cleavage by β-galactosidase, the compound releases chlorophenol red, which is a red-colored dye with an absorbance maximum at approximately 574-595 nm. The absorbance at 574-595 nm is proportional to the amount of chlorophenol red released, which is directly proportional to β-galactosidase activity. CPRG has a high extinction coefficient, making it a sensitive substrate for β-galactosidase assays. The compound does not exhibit pharmacological activity.
ln Vivo
Chlorophenol red-β-D-galactopyranoside (CPRG) does not have in vivo pharmacological activity. It is a chromogenic substrate used for research applications, primarily in vitro and ex vivo, to detect and quantify β-galactosidase activity. The compound may be used in whole-organism staining applications (e.g., in zebrafish or mouse embryos) to visualize β-galactosidase expression patterns, but this is for research purposes and not for therapeutic evaluation.
Enzyme Assay
Non-cellular assays for Chlorophenol red-β-D-galactopyranoside (CPRG) involve its use as a chromogenic substrate for β-galactosidase activity measurements. In a typical assay, CPRG is dissolved in an appropriate buffer (e.g., PBS, pH 7.0-7.5) at a concentration of 0.1-1 mM. β-Galactosidase enzyme is added to the substrate solution, and the reaction is allowed to proceed at 37°C for a defined time. The reaction is stopped by the addition of a stop solution (e.g., sodium carbonate), and the absorbance at 574-595 nm is measured using a spectrophotometer or microplate reader. A standard curve using purified β-galactosidase is prepared for quantification.
Cell Assay
In vitro cellular assays for Chlorophenol red-β-D-galactopyranoside (CPRG) typically involve measuring β-galactosidase reporter activity in cell lysates or in living cells. Cells expressing β-galactosidase (e.g., from a lacZ reporter construct) are lysed, and the cell lysate is incubated with CPRG substrate. The absorbance at 574-595 nm is measured, and β-galactosidase activity is calculated. For living cell assays, a cell-permeable CPRG analog may be used, or cells can be permeabilized to allow substrate entry. Color development is monitored over time.
Animal Protocol
Chlorophenol red-β-D-galactopyranoside (CPRG) is not used in in vivo animal studies as a therapeutic or pharmacological agent. Its application is limited to in vitro and ex vivo research applications for measuring β-galactosidase activity in biological samples. In some studies, CPRG may be used for whole-mount staining of embryos or tissues to visualize β-galactosidase expression patterns, but this is for research purposes only.
ADME/Pharmacokinetics
Chlorophenol red-β-D-galactopyranoside (CPRG) is not a drug and does not have pharmacokinetic properties. Its physical and chemical properties are more relevant: it is a chromogenic substrate with a molecular weight of 569.37 and a molecular formula of C₂₄H₁₈Cl₂O₁₀S. The compound is soluble in water and is typically prepared as a stock solution in water or buffer for use in enzyme assays. It should be stored protected from light.
Toxicity/Toxicokinetics
Specific toxicological data for Chlorophenol red-β-D-galactopyranoside (CPRG) are not extensively detailed in standard product information. As a research chemical, it should be handled with standard laboratory precautions, avoiding inhalation, ingestion, and skin contact. The compound is not intended for human use. CPRG is generally considered to have low toxicity at the concentrations used for enzyme assays.
References

[1]. A rapid and sensitive fluorimetric β-galactosidase assay for coliform detection using chlorophenol red-β-D-galactopyranoside. Anal Bioanal Chem. 2014 Sep;406(22):5395-403.

[2]. Oestrogenic activity of CPRG (chlorophenol red-β-D-galactopyranoside), a β-galactosidase substrate commonly used in recombinant yeast oestrogenic assays. Biomarkers. 2001;6(5):375-80.

Additional Infomation
Chlorophenol red-β-D-galactopyranoside (CPRG) is a research-grade chromogenic substrate intended for laboratory use only and is not approved for clinical use. Its CAS number is 99792-79-7. The primary applications of CPRG include the detection and quantification of β-galactosidase activity in reporter gene assays, enzyme kinetics studies, and histochemical staining. CPRG is a sensitive and convenient substrate for β-galactosidase, offering advantages over other chromogenic substrates such as X-gal (which requires longer incubation times and is less sensitive). CPRG is widely used in molecular biology, biochemistry, and drug discovery research.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C25H22O10SCL2
Molecular Weight
585.40718
Exact Mass
584.031
CAS #
99792-79-7
PubChem CID
127428
Appearance
Brown to reddish brown solid powder
Density
1.661
LogP
2.969
Hydrogen Bond Donor Count
5
Hydrogen Bond Acceptor Count
10
Rotatable Bond Count
5
Heavy Atom Count
38
Complexity
936
Defined Atom Stereocenter Count
5
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~125 mg/mL (~213.53 mM)
H2O : ~100 mg/mL (~170.82 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.7082 mL 8.5410 mL 17.0820 mL
5 mM 0.3416 mL 1.7082 mL 3.4164 mL
10 mM 0.1708 mL 0.8541 mL 1.7082 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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