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Boc-NH-PEG4-CH2CH2NH2

Alias: BocNHPEG4CH2CH2NH2 Boc NH PEG4 CH2CH2NH2
Cat No.:V37813 Purity: ≥98%
Boc-NH-PEG4-CH2CH2NH2 is a 5 unit PEG ADC linker that iscleavable and can be used in the synthesis of antibody-drug conjugates (ADCs).
Boc-NH-PEG4-CH2CH2NH2
Boc-NH-PEG4-CH2CH2NH2 Chemical Structure CAS No.: 811442-84-9
Product category: ADC Linker
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Boc-NH-PEG4-CH2CH2NH2 a cleavable 5 unit PEG ADC linker used in the synthesis of antibody-drug conjugates (ADCs).Another PEG-based PROTAC linker that can be utilized in the synthesis of PROTACs is Boc-NH-PEG4-CH2CH2NH2.
Boc-NH-PEG4-CH2CH2NH2 (CAS 811442-84-9) is a heterobifunctional PEG linker containing a Boc-protected amine and a terminal primary amine. With a molecular weight of 337.42 g/mol and the formula C₁₄H₃₀N₂O₆, it is used in bioconjugation and PROTAC synthesis. The Boc-protected amine provides a stable, acid-labile protecting group for the amino terminus, while the free primary amine allows for conjugation to carboxylates, activated esters, or other electrophiles. The PEG4 spacer enhances solubility and reduces steric hindrance. This linker is a critical component for creating amine-reactive conjugates and drug delivery systems.
Biological Activity I Assay Protocols (From Reference)
Targets
Cleavable Linker
PEGs
Alkyl/ether
Boc-NH-PEG4-CH2CH2NH2 functions as a PEG-based linker for connecting biomolecules. The terminal amine can be coupled to carboxylic acids using EDC/HOBt or HATU, forming stable amide bonds. The Boc group can be removed with TFA to yield a second amine, allowing for sequential conjugation of different molecules (e.g., targeting ligand and payload). The PEG4 spacer provides hydrophilicity and flexibility, improving the aqueous solubility and biocompatibility of the final conjugate.
ln Vitro
ADCs are made up of an antibody and an ADC cytotoxin that are joined together by an ADC linker.
A linker separates the two ligands that make up PROTACs; one ligand is for an E3 ubiquitin ligase, and the other is for the target protein. Target proteins are specifically broken down by PROTACs by taking advantage of the intracellular ubiquitin-proteasome system.
In vitro, this linker is used to synthesize PROTACs and drug conjugates. The resulting conjugates have been shown to effectively degrade target proteins or deliver drugs to specific cells. The amine groups enable efficient conjugation to various ligands, such as small-molecule inhibitors, peptides, or fluorescent dyes. The PEG spacer ensures that the conjugate remains soluble and has minimal non-specific interactions in cell culture media.
ln Vivo
In vivo, PROTACs and conjugates synthesized with Boc-NH-PEG4-CH2CH2NH2 exhibit improved pharmacokinetics due to the PEG spacer. The hydrophilic chain increases the hydrodynamic volume, reducing renal clearance and prolonging half-life. It also minimizes opsonization and immunogenicity, leading to enhanced systemic exposure and better target engagement in animal models. The presence of the PEG spacer is beneficial for in vivo efficacy.
Enzyme Assay
In vitro conjugation assays for Boc-NH-PEG4-CH2CH2NH2 involve monitoring the efficiency of amide bond formation using the terminal amine. The linker is reacted with a model carboxylic acid (e.g., fluorescein carboxylic acid) in the presence of a coupling reagent. The product is analyzed by HPLC and MS. Boc deprotection is confirmed by acid treatment (e.g., TFA) and subsequent detection of the free amine using ninhydrin or MS. These assays ensure the integrity and reactivity of the linker.
Cell Assay
In vitro cellular experiments for Boc-NH-PEG4-CH2CH2NH2-based conjugates are performed by treating cells with the synthesized PROTAC or conjugate. Target protein degradation is assessed by Western blot, or cellular uptake is studied via fluorescence imaging. The cytotoxicity or biological activity is measured using standard assays (MTT, CellTiter-Glo). The specificity of the conjugate is evaluated by competition experiments with excess free ligand.
Animal Protocol
In vivo animal studies for Boc-NH-PEG4-CH2CH2NH2-based conjugates are conducted in mouse models. The conjugate is administered via IV, IP, or PO routes. The pharmacokinetic profile (half-life, clearance, AUC) is determined from plasma samples. Target engagement and pharmacodynamic effects are measured in tissues. Toxicity is evaluated by histopathology and serum biochemistry. The PEG spacer contributes to an improved PK/PD profile.
ADME/Pharmacokinetics
The pharmacokinetic properties of Boc-NH-PEG4-CH2CH2NH2-based conjugates are improved by the PEG spacer. The PEG4 chain increases molecular size, reducing glomerular filtration and extending circulation time. It also reduces non-specific protein binding and opsonization, leading to a longer half-life. The AUC is enhanced, and the clearance is reduced compared to non-PEGylated conjugates. The linker's hydrophilicity also aids in formulation and administration.
Toxicity/Toxicokinetics
The toxicity profile of Boc-NH-PEG4-CH2CH2NH2-based conjugates is generally acceptable due to the biocompatibility of PEG. The PEG4 spacer is non-immunogenic and non-toxic at therapeutic doses. However, high doses may cause vacuolation in renal tubular cells or other PEG-associated effects. The overall toxicity depends on the specific payload and targeting ligand; the linker itself is considered safe and widely used in research applications.
References

[1]. Preparation of antibody drug conjugates of kinesin spindle protein (KSP) inhibitors with anti-TWEAKR-antibodies. WO2016207094A1.

Additional Infomation
Boc-NH-PEG4-CH2CH2NH2 is a versatile PEG linker used in PROTAC and bioconjugate synthesis. Its dual amine functionalities enable sequential conjugation, making it a key building block for complex molecules. The PEG4 spacer balances solubility and flexibility, ensuring the conjugate's stability and bioactivity. This compound is a standard reagent in chemical biology and drug delivery research, contributing to the development of novel targeted therapies.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C15H32N2O6
Molecular Weight
336.430
Exact Mass
336.226
Elemental Analysis
C, 53.55; H, 9.59; N, 8.33; O, 28.53
CAS #
811442-84-9
PubChem CID
11688612
Appearance
Colorless to light yellow to be determined
Density
1.059
Flash Point
222 °C
LogP
1.627
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
16
Heavy Atom Count
23
Complexity
284
Defined Atom Stereocenter Count
0
SMILES
O=C(NCCOCCOCCOCCOCCN)OC(C)(C)C
InChi Key
WCNWLERBLMBSOT-UHFFFAOYSA-N
InChi Code
InChI=1S/C15H32N2O6/c1-15(2,3)23-14(18)17-5-7-20-9-11-22-13-12-21-10-8-19-6-4-16/h4-13,16H2,1-3H3,(H,17,18)
Chemical Name
tert-butyl (14-amino-3,6,9,12-tetraoxatetradecyl)carbamate
Synonyms
BocNHPEG4CH2CH2NH2 Boc NH PEG4 CH2CH2NH2
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.9724 mL 14.8619 mL 29.7239 mL
5 mM 0.5945 mL 2.9724 mL 5.9448 mL
10 mM 0.2972 mL 1.4862 mL 2.9724 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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