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Batabulin sodium

Alias: T138067 T-138067 Batabulin sodium BatabulinT 138067
Cat No.:V7246 Purity: ≥98%
Batabulin sodium (T138067 sodium) is an anticancer agent that covalently and selectively binds to a subset of beta-tubulin isoforms, disrupting microtubule polymerization.
Batabulin sodium
Batabulin sodium Chemical Structure CAS No.: 195533-98-3
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
50mg
Other Sizes

Other Forms of Batabulin sodium:

  • Batabulin
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
Batabulin sodium (T138067 sodium) is an anticancer agent that covalently and selectively binds to a subset of beta-tubulin isoforms, disrupting microtubule polymerization. Batabulin sodium affects cell morphology and causes cell cycle arrest, ultimately inducing apoptotic cell death.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
After 24 hours of treatment with batabulin (T138067; 30-300 nM; MCF7 cells), cells exhibit 25–30% tetraploid (4n) DNA content, indicating cell cycle arrest at the G2/M cell cycle boundary [1]. 25%–30% of MCF7 cells treated with batabulin (T138067; 30-300 nM; 24-48 hours) underwent apoptosis. Of the cell population, 50–80% are undergoing apoptosis after 48 hours of exposure to 100 nM Batabulin [1]. Microtubule polymerization is disrupted by the selective covalent binding of batabulin (T138067) to a subset of β-tubulin isoforms. At conserved Cys-239, which is shared by tubulin isoforms β1, β2, and β4, covalent modification takes place. Batabulin-exposed cells exhibit increased chromosomal ploidy, cytoskeletal collapse, and morphological changes [1].
ln Vivo
The treatment of male athymic nude mice with batabulin (T138067; 40 mg/kg; i.p.; weekly; days 5, 12, and 19) inhibits the formation of drug-sensitive CCRF-CEM tumors [1].
Cell Assay
Cell Cycle Analysis[1]
Cell Types: MCF7 Cell
Tested Concentrations: 30 nM, 100 nM and 300 nM
Incubation Duration: 24 hrs (hours)
Experimental Results: Shows arrest at G2/M cell cycle boundary.

Apoptosis analysis[1]
Cell Types: MCF7 Cell
Tested Concentrations: 30 nM, 100 nM and 300 nM
Incubation Duration: 24 hrs (hours) or 48 hrs (hours)
Experimental Results: 25-30% of cells demonstrated diminished DNA content characteristic of apoptotic cells.
Animal Protocol
Animal/Disease Models: Male athymic nude mice (nu/nu) (6-8 weeks old, 20-25 g) were injected with CCRF-CEM cells [1]
Doses: 40 mg/kg
Route of Administration: intraperitoneal (ip) injection; once a week; Day 5, 12 and 19
Experimental Results: Growth of drug-sensitive CCRF-CEM tumors was impaired.
References

[1]. Selective, covalent modification of beta-tubulin residue Cys-239 by T138067, an antitumor agent with in vivo efficacy against multidrug-resistant tumors. Proc Natl Acad Sci U S A. 1999 May 11;96(10):5686-91.

Additional Infomation
Batabulin Sodium is the sodium salt form of batabulin, a synthetic pentafluorophenylsulfonamide with potential antineoplastic activity. Batabulin covalently binds to and selectively modifies the beta 1, beta 2, beta 3, and beta 4 isotypes of beta tubulin at a conserved cysteine residue, resulting in disruption of microtubule polymerization, collapse of the cytoskeleton, an increase in chromosomal ploidy, cell cycle arrest, and tumor cell apoptosis.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C13H6F6NNAO3S
Molecular Weight
393.23
Exact Mass
392.987
CAS #
195533-98-3
Related CAS #
Batabulin;195533-53-0
PubChem CID
23669770
Appearance
Off-white to light yellow solid powder
Boiling Point
403.3ºC at 760 mmHg
Flash Point
197.7ºC
Vapour Pressure
1.03E-06mmHg at 25°C
LogP
5.004
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
10
Rotatable Bond Count
4
Heavy Atom Count
25
Complexity
522
Defined Atom Stereocenter Count
0
InChi Key
UWPXRVDIKGZQQW-UHFFFAOYSA-N
InChi Code
InChI=1S/C13H6F6NO3S.Na/c1-23-7-3-2-5(4-6(7)14)20-24(21,22)13-11(18)9(16)8(15)10(17)12(13)19;/h2-4H,1H3;/q-1;+1
Chemical Name
sodium;(3-fluoro-4-methoxyphenyl)-(2,3,4,5,6-pentafluorophenyl)sulfonylazanide
Synonyms
T138067 T-138067 Batabulin sodium BatabulinT 138067
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~125 mg/mL (~317.87 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.5430 mL 12.7152 mL 25.4304 mL
5 mM 0.5086 mL 2.5430 mL 5.0861 mL
10 mM 0.2543 mL 1.2715 mL 2.5430 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT00003359 COMPLETED Drug: batabulin sodium Unspecified Adult Solid Tumor, Protocol Specific Memorial Sloan Kettering Cancer Center 1998-04 Phase 1
NCT00022243 UNKNOWN STATUS Drug: batabulin sodium Lung Cancer Tularik 2000-10 Phase 2
Biological Data
  • Selective binding of T138067 to Cys-239 of β2- and β4-tubulin. (A) Shown is an autoradiogram of a 3H-T138067-labeled cell extract derived from MCF7/ADR cells and separated by two dimensional gel electrophoresis. The first and second dimensions of the gel electrophoresis are shown. The positions of the individual β-tubulin isotypes are indicated. (B) Cys-239 of β2-tubulin bound by 3H-T138067. The 3H-T138067-modified tubulin peptide isolated from a cyanogen bromide digest of tubulin was subjected to Edman degradation. The first 10 aa corresponding to peptide Ser-234 to Met-267 of β2-tubulin and the radioactivity (cpm) coeluting with each of the amino acids (in standard single-letter code) are shown. (C) Colchicine competes for binding of T138067 to Cys-239 in vitro. Purified brain tubulin (5 μM) was incubated in the absence of drug (lane 1) or pretreated for 2 hr with colchicine [lane 2 (0.5 μM), lane 3 (5 μM), and lane 4 (25 μM)] or vinblastine [lane 5 (0.5 μM), lane 6 (5 μM), and lane 7 (25 μM)] before 5 μM of 3H-T138067 was added to the reaction for 60 min. (D and E) Colchicine competes for binding of T138067 to Cys-239 in MCF7.[1].Shan B, et al. Selective, covalent modification of beta-tubulin residue Cys-239 by T138067, an antitumor agent with in vivo efficacy against multidrug-resistant tumors. Proc Natl Acad Sci U S A. 1999 May 11;96(10):5686-91.
  • Inhibition by T138067 of microtubule formation in vitro. (A) SDS/PAGE of the cushion fraction from a sedimentation assay. Polymerization reactions (40 μM tubulin) were kept on ice (lane 1), 37°C (lane 2), or 37°C in the presence of T138067 [lane 3 (1 μM), lane 4 (3 μM), and lane 5 (10 μM)], colchicine [lane 6 (1 μM), lane 7 (3 μM), and lane 8 (10 μM)], or paclitaxel [lane 9 (1 μM), lane 10 (3 μM), and lane 11 (10 μM)] for 10 min before analyses. (B) Turbidimetric assay. Graphical representation of changes in the OD at 340 nm over time (min) in the absence (no drug) or presence of the indicated compounds.[1].Shan B, et al. Selective, covalent modification of beta-tubulin residue Cys-239 by T138067, an antitumor agent with in vivo efficacy against multidrug-resistant tumors. Proc Natl Acad Sci U S A. 1999 May 11;96(10):5686-91.
  • T138067-induced collapse of the cytoskeleton and cell-cycle arrest. (A) Phase-contrast images of MCF7 cells after treatment with T138067. MCF7 cells were either incubated in the absence of drug (no drug) or treated for 9 hr with the indicated concentrations of T138067. Representative images were taken at ×100 magnification. (B) FACS analysis of nuclei isolated from MCF7 cells that were untreated (no drug) or treated for 24 hr with T138067 at the concentrations indicated for the corresponding panel in A. DNA content (2n = diploid; 4n = tetraploid) is indicated.[1].Shan B, et al. Selective, covalent modification of beta-tubulin residue Cys-239 by T138067, an antitumor agent with in vivo efficacy against multidrug-resistant tumors. Proc Natl Acad Sci U S A. 1999 May 11;96(10):5686-91.
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