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ALX-5407

Alias: NFPS; 405225-21-0; 2-[[3-(4-fluorophenyl)-3-(4-phenylphenoxy)propyl]-methylamino]acetic acid; CHEMBL26512; 571147-18-7; N-[3-(4'-fluorophenyl)-3-(4'-phenylphenoxy)propyl]sarcosine; [3H]NFPS; [3H]-NFPS;
Cat No.:V10908 Purity: ≥98%
NFPS is a selective, noncompetitive glycine transporter-1 (GlyT1) inhibitor (antagonist) with IC50s of 2.8 nM and 9.8 nM for hGlyT1 and rGlyT1, respectively.
ALX-5407
ALX-5407 Chemical Structure CAS No.: 405225-21-0
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price
500mg
1g
Other Sizes
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Product Description
NFPS is a selective, noncompetitive glycine transporter-1 (GlyT1) inhibitor (antagonist) with IC50s of 2.8 nM and 9.8 nM for hGlyT1 and rGlyT1, respectively. NFPS exerts neuro-protective (neuro-protection) effects through the glyR alpha1 subunit in a rat model of transient focal cerebral ischemia and reperfusion.
Biological Activity I Assay Protocols (From Reference)
Targets
ALX-5407 (NFPS) selectively inhibits glycine transporter type 1 (GlyT1) with a binding affinity Kd =7.1±1.3 nMKd=7.1±1.3nM in rat forebrain membranes and Kd =21±3 nMKd=21±3nM for recombinant rat GlyT1a. It shows no activity against GlyT2 (IC50>100μM)[1]
ln Vitro
[³H]NFPS binds rapidly to rat forebrain membranes (\( t_{1/2} = 13 \pm 4 \, \text{min} \)) and dissociates slowly (\( t_{1/2} = 28 \pm 5 \, \text{min} \)). Saturation analysis reveals a single binding site (\( B_{\text{max}} = 3.14 \pm 0.26 \, \text{pmol/mg protein} \)). Glycine and sarcosine weakly displace bound [³H]NFPS (\( IC_{50} = 1008 \, \mu\text{M} \) and \( 190 \, \mu\text{M} \), respectively), acting as non-competitive antagonists[1]

Functional uptake assays in HEK-293 cells expressing GlyT1a show ALX-5407 potently inhibits [¹⁴C]glycine uptake (\( IC_{50} = 9.8 \pm 0.1 \, \text{nM} \)). Kinetic studies confirm non-competitive inhibition, reducing \( V_{\text{max}} \) without altering \( K_m \) for glycine, Na⁺, or Cl⁻[1]

Regional binding density varies: cerebellum (\( 12.5 \pm 1.2 \, \text{pmol/mg protein} \)), striatum (\( 7.1 \pm 1.6 \)), cortex (\( 5.9 \pm 0.7 \)), hippocampus (\( 4.5 \pm 1.4 \))[1]

ln Vivo
ALX-5407 increases extracellular glycine concentration by 40% in rat prefrontal cortex after systemic administration, enhancing NMDA receptor activity[1]

In rat dentate gyrus, it potentiates NMDA receptor-dependent long-term potentiation (LTP), supporting its role in modulating excitatory neurotransmission[1]

Enzyme Assay
Radioligand binding assays: Rat forebrain membranes (50 µl) incubated with [³H]NFPS (0.25–65 nM) in TB1 buffer (120 mM NaCl, 2 mM KCl, 1 mM CaCl₂, 1 mM MgCl₂, 10 mM HEPES, pH 7.5). Non-specific binding defined with 10 µM unlabeled NFPS. Filtration through GF/B filters after 30-min incubation, followed by scintillation counting[1]

Cell Assay
Glycine uptake assays: JAR cells or GlyT1-expressing HEK-293 cells incubated with [¹⁴C]glycine (10 µM) in TB1A buffer ± inhibitors. Uptake terminated by rapid filtration after 3 h; radioactivity quantified via scintillation[1]

Ion dependency tests: Na⁺/Cl⁻ replaced with Li⁺/acetate to assess ion binding site interactions[1]

Animal Protocol
In vivo glycine modulation: Rats administered ALX-5407 systemically (dose unspecified). Extracellular glycine in prefrontal cortex measured via microdialysis[1]

LTP studies: Drug delivered to evaluate NMDA receptor potentiation in dentate gyrus. Synaptic responses recorded electrophysiologically[1]

ADME/Pharmacokinetics
Systemic administration can increase corticoglycine levels by 40%, indicating improved blood-brain barrier penetration [1].
References

[1]. Pharmacology and expression analysis of glycine transporter GlyT1 with [3H]-(N-[3-(4'-fluorophenyl)-3-(4'phenylphenoxy)propyl])sarcosine. Neuropharmacology. 2003 Oct;45(5):585-93.

[2]. GlyT1 Inhibitor NFPS Exerts Neuroprotection via GlyR Alpha1 Subunit in the Rat Model of Transient Focal Cerebral Ischaemia and Reperfusion. Cell Physiol Biochem. 2016;38(5):1952-62.

Additional Infomation
ALX-5407 is a non-competitive inhibitor that binds to an extracellular site on GlyT1, which is distinct from the glycine/ion transport site. It modulates the NMDA receptor by increasing synaptic glycine levels, which has potential applications in the treatment of schizophrenia (improvement of negative/cognitive symptoms) [1]. Its racemic form was tritium-labeled ([³H]NFPS; 19 Ci/mmol) for binding studies. The potency of the (+) enantiomer (IC50 = 0.67 pm0.1 nM) was higher than that of the (−) enantiomer (IC50 = 30 pm11 nM) [1].
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C24H24FNO3
Molecular Weight
393.45067024231
Exact Mass
393.174
Elemental Analysis
C, 73.26; H, 6.15; F, 4.83; N, 3.56; O, 12.20
CAS #
405225-21-0
Related CAS #
405225-21-0;571147-18-7;
PubChem CID
5311283
Appearance
Typically exists as solid at room temperature
LogP
5.019
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
9
Heavy Atom Count
29
Complexity
481
Defined Atom Stereocenter Count
0
SMILES
CN(CC(O)=O)CCC(C1=CC=C(F)C=C1)OC1=CC=C(C2=CC=CC=C2)C=C1
InChi Key
FDORQEIHOKEJNX-UHFFFAOYSA-N
InChi Code
InChI=1S/C24H24FNO3/c1-26(17-24(27)28)16-15-23(20-7-11-21(25)12-8-20)29-22-13-9-19(10-14-22)18-5-3-2-4-6-18/h2-14,23H,15-17H2,1H3,(H,27,28)
Chemical Name
2-[[3-(4-fluorophenyl)-3-(4-phenylphenoxy)propyl]-methylamino]acetic acid
Synonyms
NFPS; 405225-21-0; 2-[[3-(4-fluorophenyl)-3-(4-phenylphenoxy)propyl]-methylamino]acetic acid; CHEMBL26512; 571147-18-7; N-[3-(4'-fluorophenyl)-3-(4'-phenylphenoxy)propyl]sarcosine; [3H]NFPS; [3H]-NFPS;
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.5416 mL 12.7081 mL 25.4162 mL
5 mM 0.5083 mL 2.5416 mL 5.0832 mL
10 mM 0.2542 mL 1.2708 mL 2.5416 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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