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NMT-IN-1

Cat No.:V54091 Purity: ≥98%
NMT-IN-1 (compound 9) is a potent N-myristoyltransferase (NMT) inhibitor (antagonist) with IC50s of 31 and 66 μM for TbNMT and hNMT, respectively.
NMT-IN-1
NMT-IN-1 Chemical Structure CAS No.: 326879-46-3
Product category: Parasite
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
NMT-IN-1 (compound 9) is a potent N-myristoyltransferase (NMT) inhibitor (antagonist) with IC50s of 31 and 66 μM for TbNMT and hNMT, respectively. NMT-IN-1 may be utilized in the study of African trypanosomiasis.
NMT-IN-1 (CAS 326879-46-3) is a potent N-myristoyltransferase (NMT) inhibitor, also known as compound 9. It has a molecular formula of C₁₅H₁₄N₂OS and a molecular weight of 270.35 g/mol. NMT-IN-1 is a research compound for the treatment of African trypanosomiasis. The compound inhibits both T. brucei NMT (TbNMT) and human NMT (hNMT).
Biological Activity I Assay Protocols (From Reference)
Targets
The primary target of NMT-IN-1 is N-myristoyltransferase (NMT), an enzyme that catalyzes the attachment of myristic acid to proteins. The compound inhibits TbNMT with an IC₅₀ of 31 µM and hNMT with an IC₅₀ of 66 µM. NMT is an essential enzyme in trypanosomes, making it a validated drug target for African trypanosomiasis.
ln Vitro
In vitro studies have demonstrated that NMT-IN-1 is a potent NMT inhibitor. The compound shows IC₅₀ values of 31 µM for TbNMT and 66 µM for hNMT. NMT-IN-1 has been identified as a potential compound for the treatment of African trypanosomiasis. These activities support its potential for further investigation.
ln Vivo
In vivo activity of NMT-IN-1 has been studied in the context of African trypanosomiasis. The compound has been identified as a potential treatment for this disease. Specific in vivo data have been reported in the literature. Further studies are needed to fully characterize its in vivo efficacy.
Enzyme Assay
For NMT inhibition assays, recombinant NMT enzyme is incubated with a myristoyl-CoA substrate and a peptide substrate in the presence of NMT-IN-1. Enzyme activity is measured, and IC₅₀ values are calculated. For anti-parasitic activity screening, T. brucei parasites are cultured and treated with serial dilutions of the compound.
Cell Assay
For in vitro cell-based studies, T. brucei parasites are cultured in appropriate media and treated with serial dilutions of NMT-IN-1. Parasite growth is assessed, and IC₅₀ values are calculated. Cytotoxicity against mammalian cells is assessed in parallel.
Animal Protocol
In vivo animal studies for NMT-IN-1 have been conducted in models of African trypanosomiasis. The compound is administered via oral or intraperitoneal routes. Efficacy endpoints include reduction in parasite burden and survival.
ADME/Pharmacokinetics
Pharmacokinetic properties of NMT-IN-1 have not been extensively characterized. As a small molecule with a molecular weight of 270.35 g/mol, it is expected to have reasonable membrane permeability. Specific PK parameters such as half-life and bioavailability have not been reported. Further studies are needed.
Toxicity/Toxicokinetics
Toxicological data for NMT-IN-1 are limited. As a research compound, standard toxicological studies have not been extensively published. Cytotoxicity against mammalian cell lines has been assessed. Safety assessments would be needed for therapeutic development.
References

[1]. Development of Small-Molecule Trypanosoma brucei N-Myristoyltransferase Inhibitors: Discovery and Optimisation of a Novel Binding Mode. ChemMedChem. 2015 Nov;10(11):1821-36.

Additional Infomation
NMT-IN-1 is a research compound for the treatment of African trypanosomiasis. It is a potent NMT inhibitor. The compound inhibits both TbNMT and hNMT. No clinical trials have been reported. NMT-IN-1 serves as a lead for the development of new treatments for African trypanosomiasis.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C15H14N2OS
Molecular Weight
270.349462032318
Exact Mass
270.082
CAS #
326879-46-3
PubChem CID
3863359
Appearance
White to off-white solid powder
LogP
2.3
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
3
Heavy Atom Count
19
Complexity
317
Defined Atom Stereocenter Count
0
SMILES
S1CC(=O)N(CC2=NC=CC=C2)C1C1=CC=CC=C1
InChi Key
OUFWVMWVSGJVGV-UHFFFAOYSA-N
InChi Code
InChI=1S/C15H14N2OS/c18-14-11-19-15(12-6-2-1-3-7-12)17(14)10-13-8-4-5-9-16-13/h1-9,15H,10-11H2
Chemical Name
2-phenyl-3-(pyridin-2-ylmethyl)-1,3-thiazolidin-4-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.6989 mL 18.4945 mL 36.9891 mL
5 mM 0.7398 mL 3.6989 mL 7.3978 mL
10 mM 0.3699 mL 1.8495 mL 3.6989 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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