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Micrococcin P1 (Micrococcin P1)

Micrococcin P1 is a macrocyclic peptide antibiotic and a potent inhibitor of HCV (hepatitis C virus) with EC50 range of 0.1-0.5 μM.
Micrococcin P1 (Micrococcin P1)
Micrococcin P1 (Micrococcin P1) Chemical Structure CAS No.: 67401-56-3
Product category: Bacterial
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
500μg
1mg
Other Sizes
Official Supplier of:
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Product Description
Micrococcin P1 is a macrocyclic peptide antibiotic and a potent inhibitor of HCV (hepatitis C virus) with EC50 range of 0.1-0.5 μM. Micrococcin P1 has in vitro anti-bacterial effect against Gram-positive (Gram+) bacterial strains, with MICs of 2 μg/mL, 1 μg/mL and 1 against Staphylococcus aureus strain 1974149, Enterococcus faecalis 1674621 strain and Streptococcus pyogenes 1744264 strain, respectively. μg/mL. Micrococcin P1 is also a potent inhibitor of the malaria parasite Plasmodium falciparum.
Micrococcin P1 (CAS#: 67401-56-3) is a macrocyclic peptide antibiotic. It is a potent hepatitis C virus (HCV) inhibitor with an EC₅0 range of 0.1-0.5 microM. It has in vitro antibacterial activity against Gram-positive bacterial strains, with MIC values of 2 microg/mL against S. aureus, 1 microg/mL against E. faecalis, and 1 microg/mL against S. pyogenes. It is also a potent inhibitor of the malaria parasite Plasmodium falciparum. It has a molecular weight of 1144.37.
Biological Activity I Assay Protocols (From Reference)
Targets
HCV[1]; Bacterial[2]; Parasite[3]
Bacterial ribosomes (protein synthesis), HCV entry, and Plasmodium falciparum. Micrococcin P1 functions by inhibiting protein synthesis through binding to bacterial ribosomes and preventing polypeptide elongation. It inhibits HCV entry in a pan-genotypic manner.
ln Vitro
Micrococcin P1 is extremely powerful, with a minimum inhibitory concentration (MIC) of 32–63 nM, according to dose-response studies. Cytotoxicity studies on the hepatic cell line HepG2 and the monocytic cell line THP-1 over a 40-hour period showed no discernible effect on cell line growth (<10% inhibition at 30 mM), resulting in a selectivity index larger than 500. examines Micrococcin P1's intracellular activities as well; it functions against M that expresses GFP. H37Rv TB developing inside RAW 264.7 macrophages, showing a potency similar to isoniazid at an IC80 of roughly 1 mM[1].
Micrococcin P1 is a potent HCV inhibitor with an EC₅0 range of 0.1-0.5 microM. It has in vitro antibacterial activity against Gram-positive strains with MICs of 2 microg/mL (S. aureus), 1 microg/mL (E. faecalis), and 1 microg/mL (S. pyogenes). Dose-response assays revealed a MIC of 32-63 nM. It is active against GFP-expressing M. tuberculosis H37Rv inside RAW 264.7 macrophages with an IC₅0 of about 1 mM. Cytotoxicity assays showed no significant impairment on HepG2 or THP-1 cell line growth (<10% inhibition at 30 mM) over 40 hours, yielding a selectivity index >500.
ln Vivo
No detailed in vivo activity data has been reported for Micrococcin P1. As a macrocyclic peptide antibiotic with antiviral and antiparasitic activities, it could potentially be evaluated in animal models of bacterial, viral, or parasitic infections.
Enzyme Assay
HCV entry inhibition assays: Micrococcin P1 is tested in HCV cell culture systems. Antibacterial activity is assessed using broth microdilution assays against Gram-positive bacterial strains. Antimalarial activity is evaluated against P. falciparum cultures. MIC and EC₅0 values are calculated from dose-response curves.
Cell Assay
Antibacterial activity is evaluated using standard broth microdilution assays against Gram-positive bacterial strains. MICs are determined after incubation. Antiviral activity against HCV is assessed in cell culture systems. Cytotoxicity is evaluated in HepG2 and THP-1 cells using MTT or CellTiter-Glo assays. Intracellular activity against M. tuberculosis is assessed in infected RAW 264.7 macrophages.
Animal Protocol
Animal models of bacterial infection (e.g., murine models of S. aureus infection) or HCV infection could be used to evaluate Micrococcin P1 in vivo. Efficacy would be assessed by bacterial load reduction, viral load, and survival.
ADME/Pharmacokinetics
Micrococcin P1 has a molecular weight of 1144.37 and a molecular formula of C4₈H4₉N13O₉S₆. It is a macrocyclic peptide antibiotic. Storage: powder at -20degC for 3 years; in solvent at -80degC for 6 months.
Toxicity/Toxicokinetics
No detailed toxicity data has been published for Micrococcin P1. Cytotoxicity assays showed no significant impairment on HepG2 or THP-1 cell growth (<10% inhibition at 30 mM) over 40 hours. As a research compound, it is not intended for human therapeutic use.
References

[1]. Micrococcin P1, a naturally occurring macrocyclic peptide inhibiting hepatitis C virus entry in a pan-genotypic manner. Antiviral Res. 2016 Aug;132:287-95.

[2]. Total synthesis of micrococcin P1 and thiocillin I enabled by Mo(vi) catalyst. Chem Sci. 2018 Dec 3;10(7):1971-1975.

[3]. Pyridinyl polythiazole class peptide antibiotic micrococcin P1, secreted by foodborne Staphylococcus equorum WS2733, is biosynthesized nonribosomally. Eur J Biochem. 2001 Dec;268(24):6390-401.

Additional Infomation
13',19'-disehydro-19'-deoxy-28,44-dihydro-44-hydroxymicrococcin P has been reported in Bacillus pumilus, and relevant data are available.
See also: Micrococcin (note moved to).
Micrococcin P1 is a macrocyclic peptide antibiotic that inhibits HCV entry (EC₅0 0.1-0.5 microM), has antibacterial activity against Gram-positive bacteria, and inhibits P. falciparum. The compound is for research use only and has not entered clinical trials.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C48H49N13O9S6
Molecular Weight
1144.37
Exact Mass
1143.21
CAS #
67401-56-3
PubChem CID
91755078
Appearance
White to yellow solid powder
LogP
7.665
Hydrogen Bond Donor Count
9
Hydrogen Bond Acceptor Count
22
Rotatable Bond Count
10
Heavy Atom Count
76
Complexity
2180
Defined Atom Stereocenter Count
6
SMILES
C/C=C\1/C2=NC(=CS2)C(=O)N[C@H](C3=NC(=CS3)C(=O)N[C@H](C4=NC(=CS4)C5=C(C=CC(=N5)C6=NC(=CS6)C7=NC(=CS7)C(=O)N/C(=C\C)/C(=O)NC[C@@H](C)O)C8=NC(=CS8)C(=O)N[C@H](C(=O)N1)[C@@H](C)O)[C@@H](C)O)C(C)C
InChi Key
MQGFYNRGFWXAKA-QMXXNAFJSA-N
InChi Code
InChI=1S/C48H49N13O9S6/c1-8-24(37(65)49-12-20(5)62)51-38(66)28-15-73-46(56-28)32-18-74-45(58-32)26-11-10-23-36(50-26)27-13-75-48(53-27)35(22(7)64)61-41(69)31-17-76-47(57-31)33(19(3)4)59-39(67)30-16-72-44(55-30)25(9-2)52-42(70)34(21(6)63)60-40(68)29-14-71-43(23)54-29/h8-11,13-22,33-35,62-64H,12H2,1-7H3,(H,49,65)(H,51,66)(H,52,70)(H,59,67)(H,60,68)(H,61,69)/b24-8-,25-9-/t20-,21-,22-,33+,34+,35+/m1/s1
Chemical Name
2-[2-[(12S,19S,26Z,29S)-26-ethylidene-12,29-bis[(1R)-1-hydroxyethyl]-14,21,28,31-tetraoxo-19-propan-2-yl-10,17,24,34-tetrathia-6,13,20,27,30,35,36,37,38-nonazahexacyclo[30.2.1.18,11.115,18.122,25.02,7]octatriaconta-1(35),2(7),3,5,8,11(38),15,18(37),22,25(36),32-undecaen-5-yl]-1,3-thiazol-4-yl]-N-[(Z)-1-[[(2R)-2-hydroxypropyl]amino]-1-oxobut-2-en-2-yl]-1,3-thiazole-4-carboxamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.8738 mL 4.3692 mL 8.7384 mL
5 mM 0.1748 mL 0.8738 mL 1.7477 mL
10 mM 0.0874 mL 0.4369 mL 0.8738 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • Enter 10 in the Concentration box and choose the correct unit (mM)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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