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LDC4297 hydrochloride

Cat No.:V51877 Purity: ≥98%
LDC4297 HCl is a selective inhibitor of CDK7 with IC50 of 0.13 nM.
LDC4297 hydrochloride
LDC4297 hydrochloride Chemical Structure CAS No.: 2319747-14-1
Product category: CDK
This product is for research use only, not for human use. We do not sell to patients.
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Other Forms of LDC4297 hydrochloride:

  • LDC4297
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Top Publications Citing lnvivochem Products
Product Description
LDC4297 HCl is a selective inhibitor of CDK7 with IC50 of 0.13 nM. LDC4297 HCl inhibits human cytomegalovirus (HCMV) replication with EC50 of 24.5 nM. LDC4297 HCl displays a broad-spectrum antiviral effect with EC50s of 0.02-1.21 μM against herpesviruses, adenoviruses, poxviruses, retroviruses and orthomyxoviruses. LDC4297 HCl may be utilized in infection research.
LDC4297 hydrochloride (CAS 2319747-14-1) is a selective and potent inhibitor of cyclin-dependent kinase 7 (CDK7) with an IC50 of 0.13 nM. It inhibits human cytomegalovirus (HCMV) replication with an EC50 of 24.5 nM. LDC4297 hydrochloride shows broad antiviral activities against Herpesviridae, Adenoviridae, Poxviridae, Retroviridae, and Orthomyxoviridae with EC50 values of 0.02-1.21 μM. It is used in infection research.
Biological Activity I Assay Protocols (From Reference)
Targets
CDK7 0.13 nM (IC50) 166v VP22-GFP 0.02 μM (EC50) 01-6332 0.27 μM (EC50) HIV-1 (NL4.3 strain) 1.04 μM (EC50) 4LIG7 1.13 μM (EC50)
LDC4297 hydrochloride targets cyclin-dependent kinase 7 (CDK7), a serine/threonine kinase that plays a key role in cell cycle regulation and transcription. CDK7 is a component of the CDK-activating kinase (CAK) complex and is essential for the activation of other CDKs involved in cell cycle progression. By potently inhibiting CDK7 with an IC50 of 0.13 nM, LDC4297 hydrochloride disrupts cell cycle progression and transcription, leading to antiviral and antiproliferative effects.
ln Vitro
LDC4297 hydrochloride (0-10 μM; 6 d) dose-dependently suppresses HCMV replication with an EC50 value of 24.5 nM[1]. LDC4297 hydrochloride (0-10 μM; 4 d) has a GI50 value of 4.5 μM and exhibits anti-proliferative activity against primary cultures of human fibroblasts (HFF)[1]. Via a complex mechanism of action that includes interfering with virus-induced Rb phosphorylation, LDC4297 hydrochloride (20 μM; 12-96 h) has anti-HCMV activity[1]. Broad antiviral activities against HCMV, GPCMV, MCMV, HVV-6A, HSV-1, HSV-2, VZV, EBV, HAdV-2, Vaccinia virus, HIV-1 (nl4-3), HIV-1 (4LIG7), and Influenza A virus are demonstrated by LDC4297 hydrochloride (0-10 μM; 7 d), with EC50 values of 0.02, 0.05, 0.07, 0.04, 0.02, 0.27, 0.06, 1.21, 0.25, 0.77, 1.04, 1.13, and 0.99 μM, respectively[1].
In vitro, LDC4297 hydrochloride inhibits human cytomegalovirus (HCMV) replication with an EC50 of 24.5 nM. It shows broad antiviral activities against Herpesviridae, Adenoviridae, Poxviridae, Retroviridae, and Orthomyxoviridae with EC50 values of 0.02-1.21 μM. LDC4297 hydrochloride (0-10 μM; 4 days) has a GI50 value of 4.5 μM and exhibits anti-proliferative activity against primary cultures of human fibroblasts (HFF).
ln Vivo
Pharmacokinetic analyses of LDC4297 hydrochloride (100 mg/kg; po once) are encouraging[1].
In vivo data for LDC4297 hydrochloride is not extensively reported in publicly available sources. As a potent CDK7 inhibitor with broad antiviral activity, the compound has potential applications in animal models of viral infections, including HCMV, herpesviruses, and other viral pathogens. By targeting a host factor essential for viral replication, LDC4297 hydrochloride could provide a broad-spectrum antiviral approach. However, specific published in vivo efficacy studies are not detailed in the current literature.
Enzyme Assay
The in vitro CDK7 inhibition assay for LDC4297 hydrochloride uses recombinant CDK7 kinase and a peptide substrate. Kinase activity is measured using radioactive or luminescent detection methods, and IC50 values are calculated from dose-response curves. Antiviral assays are performed in virus-infected cells, with viral replication measured by plaque reduction assay, qPCR, or cytopathic effect. EC50 values are calculated from dose-response curves.
Cell Assay
Western Blot Analysis[1]
Cell Types: Primary cultures of fibroblasts derived from human (HFF) with virus infection
Tested Concentrations: 20 μM
Incubation Duration: 12, 24, 48 and 96 hrs (hours)
Experimental Results: demonstrated inhibitory effect towards viral protein synthesis at the stage of immediate early (IE) gene expression and the drug-mediated reduction of IE1p72 levels partially recovered over time. Exerted an inhibitory effect on human cytomegalovirus (HCMV) induced an up-regulation of protein expression or protein phosphorylation, and decreased Rb expression in the uninfected control cells at 24 h.
Cellular assays for LDC4297 hydrochloride are conducted in virus-infected cell lines and primary human fibroblasts. Cells are treated with varying concentrations of LDC4297 hydrochloride. Viral replication is measured by plaque reduction assay, qPCR, or cytopathic effect. Cell viability and proliferation are measured using standard assays such as MTT to determine GI50 values. The compound's effects on CDK7 activity are confirmed by measuring phosphorylation of CDK7 substrates.
Animal Protocol
Animal/Disease Models: CD1 mice[1]
Doses: 100 mg/kg
Route of Administration: po (oral gavage); 100 mg/kg once
Experimental Results: demonstrated a half-life (t1/2z) of 1.6 h, and the time to a mean peak plasma concentration of 1297.6 ng/mL is reached 0.5 h after administration with a continued presence in plasma for at least 8 h and a bioavailability of 97.7%.
In vivo studies for LDC4297 hydrochloride would typically involve animal models of viral infections, such as HCMV or other herpesvirus infections. The compound would be administered via intraperitoneal or oral routes at doses determined by pharmacokinetic studies. Efficacy would be assessed by measuring viral loads in tissues and clinical signs of infection. However, specific published in vivo protocols for LDC4297 hydrochloride are not available in the current literature. The compound is currently used as a research tool.
ADME/Pharmacokinetics
Pharmacokinetic data for LDC4297 hydrochloride is not extensively reported in publicly available sources. The compound has a molecular weight of 468.98 g/mol and a molecular formula of C23H29ClN8O. It has a CAS number of 2319747-14-1. As a small molecule CDK7 inhibitor, it is expected to have moderate bioavailability. Detailed PK parameters such as half-life are not available in the current literature for this research compound.
Toxicity/Toxicokinetics
Toxicity data for LDC4297 hydrochloride is limited in publicly available sources. As with all research compounds, LDC4297 hydrochloride is intended for research use only and not for human therapeutic applications. The compound's potent CDK7 inhibition suggests potential on-target toxicities that would need to be addressed. Standard in vitro cytotoxicity assays and in vivo tolerability studies would be required for a complete toxicity assessment.
References

[1]. A novel CDK7 inhibitor of the Pyrazolotriazine class exerts broad-spectrum antiviral activity at nanomolar concentrations. Antimicrob Agents Chemother. 2015 Apr;59(4):2062-71.

Additional Infomation
LDC4297 hydrochloride (CAS 2319747-14-1) is a selective CDK7 inhibitor with an IC50 of 0.13 nM. It inhibits HCMV replication (EC50 = 24.5 nM) and shows broad antiviral activity against multiple virus families (EC50 = 0.02-1.21 μM). It has a GI50 of 4.5 μM in human fibroblasts. LDC4297 hydrochloride has a molecular formula of C23H29ClN8O and a molecular weight of 468.98 g/mol. It is a valuable research tool for studying CDK7 biology and antiviral strategies.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C23H29CLN8O
Molecular Weight
468.982362508774
Exact Mass
468.215
CAS #
2319747-14-1
Related CAS #
LDC4297;1453834-21-3
PubChem CID
137958370
Appearance
White to off-white solid powder
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
7
Heavy Atom Count
33
Complexity
594
Defined Atom Stereocenter Count
0
SMILES
C(C1C=NN2C(=NC(OC3CNCCC3)=NC=12)NCC1C=CC=CC=1N1N=CC=C1)(C)C.Cl
InChi Key
CEUJJAKJRBKKSL-UHFFFAOYSA-N
InChi Code
InChI=1S/C23H28N8O.ClH/c1-16(2)19-15-27-31-21(19)28-23(32-18-8-5-10-24-14-18)29-22(31)25-13-17-7-3-4-9-20(17)30-12-6-11-26-30;/h3-4,6-7,9,11-12,15-16,18,24H,5,8,10,13-14H2,1-2H3,(H,25,28,29);1H
Chemical Name
2-piperidin-3-yloxy-8-propan-2-yl-N-[(2-pyrazol-1-ylphenyl)methyl]pyrazolo[1,5-a][1,3,5]triazin-4-amine;hydrochloride
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : 100 mg/mL (213.23 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.1323 mL 10.6614 mL 21.3229 mL
5 mM 0.4265 mL 2.1323 mL 4.2646 mL
10 mM 0.2132 mL 1.0661 mL 2.1323 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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