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D-Proline, 4-hydroxy-, methyl ester hydrochloride

Cat No.:V40168 Purity: ≥98%
D-Proline, 4-hydroxy-, methyl ester ( HCl) is a non-cleavable (non-degradable) ADC linker used to synthesize active antibody conjugated molecules (ADCs).
D-Proline, 4-hydroxy-, methyl ester hydrochloride
D-Proline, 4-hydroxy-, methyl ester hydrochloride Chemical Structure CAS No.: 114676-59-4
Product category: ADC Linker
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
D-Proline, 4-hydroxy-, methyl ester ( HCl) is a non-cleavable (non-degradable) ADC linker used to synthesize active antibody conjugated molecules (ADCs). D-Proline, 4-hydroxy-, methyl ester ( HCl) is also a PROTAC (PROteolysis TArgeting Chimera) linker based on alkyl chain and may be utilized to prepare PROTAC molecules.
D-Proline, 4-hydroxy-, methyl ester hydrochloride ((4R)-4-hydroxy-D-proline methyl ester hydrochloride) is a chiral amino acid derivative with a molecular weight of 181.62 g/mol and a molecular formula of C6H12ClNO3. It is a non-cleavable ADC (antibody-drug conjugate) linker used in the synthesis of antibody-drug conjugates. It is also an alkyl chain-based PROTAC linker that can be used in the synthesis of PROTACs.
Biological Activity I Assay Protocols (From Reference)
Targets
Non-cleavable Linker
D-Proline, 4-hydroxy-, methyl ester hydrochloride does not have a classical pharmacological target. It serves as a chemical linker in the synthesis of bioconjugates. As a non-cleavable ADC linker, it is used to covalently attach cytotoxic drugs to antibodies for targeted cancer therapy. As a PROTAC linker, it connects a target protein ligand to an E3 ligase ligand.
ln Vitro
ADC cytotoxins are connected to antibodies through an ADC connector to form ADCs [1]. Two distinct ligands, one for the E3 ubiquitin ligase and the other for the target protein, are present in PROTAC and are joined by a linker. PROTAC selectively degrades target proteins by means of the intracellular ubiquitin-proteasome system [2].
In vitro, D-Proline, 4-hydroxy-, methyl ester hydrochloride is characterized by its utility as a linker in bioconjugate chemistry. It is not evaluated for traditional pharmacological activity but rather for its chemical properties and compatibility with conjugation reactions. Its stability and reactivity in the synthesis of ADCs and PROTACs are key attributes.
ln Vivo
In vivo, D-Proline, 4-hydroxy-, methyl ester hydrochloride is not used as a therapeutic agent itself. Its in vivo activity is realized through the ADCs or PROTACs that incorporate it as a linker. These conjugates can deliver cytotoxic payloads to tumor cells (ADCs) or induce targeted protein degradation (PROTACs) in vivo.
Enzyme Assay
In vitro assays for D-Proline, 4-hydroxy-, methyl ester hydrochloride typically involve assessing its utility as a linker in conjugation reactions. The compound is used in the synthesis of ADC or PROTAC molecules. Its purity, stability, and reactivity are characterized by HPLC, NMR, and mass spectrometry. Conjugation efficiency to antibodies or target protein ligands is evaluated.
Cell Assay
For in vitro cell-based assays, D-Proline, 4-hydroxy-, methyl ester hydrochloride is not typically used directly. Instead, the ADCs or PROTACs synthesized using this linker are evaluated for their biological activity. ADC activity is assessed by measuring target cell cytotoxicity. PROTAC activity is assessed by measuring target protein degradation via Western blot. Cell viability is assessed by MTT or standard assays.
Animal Protocol
In vivo animal studies with D-Proline, 4-hydroxy-, methyl ester hydrochloride are not typically performed on the linker itself. The ADCs or PROTACs synthesized using this linker are evaluated in animal models. ADC efficacy is assessed in xenograft models by measuring tumor growth inhibition. PROTAC efficacy is assessed by measuring target protein degradation in tissues and tumor growth inhibition.
ADME/Pharmacokinetics
D-Proline, 4-hydroxy-, methyl ester hydrochloride (CAS: 114676-59-4) has a molecular weight of 181.62 g/mol and a molecular formula of C6H12ClNO3. IUPAC name: methyl (2R,4R)-4-hydroxypyrrolidine-2-carboxylate hydrochloride. Appearance: solid. Storage: -20°C. The compound is a non-cleavable ADC linker and an alkyl chain-based PROTAC linker.
Toxicity/Toxicokinetics
D-Proline, 4-hydroxy-, methyl ester hydrochloride is a research compound and is not approved for human therapeutic use. As a chemical linker, it is used in very small quantities in the synthesis of ADCs and PROTACs. Standard laboratory safety precautions should be followed when handling the compound. Comprehensive toxicology studies are not typically performed on the linker itself.
References
[1]. Beck A, et al. Strategies and challenges for the next generation of antibody-drug conjugates. Nat Rev Drug Discov. 2017;16(5):315-337.
[2]. Nalawansha DA, et al. PROTACs: An Emerging Therapeutic Modality in Precision Medicine. Cell Chem Biol. 2020;27(8):998-985.
Additional Infomation
D-Proline, 4-hydroxy-, methyl ester hydrochloride ((4R)-4-hydroxy-D-proline methyl ester hydrochloride) is a chiral amino acid derivative with a molecular weight of 181.62 g/mol and a molecular formula of C6H12ClNO3. It is a non-cleavable ADC linker used in the synthesis of antibody-drug conjugates and an alkyl chain-based PROTAC linker. It is not FDA-approved and is intended for research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C6H12CLNO3
Molecular Weight
181.62
Exact Mass
181.05
CAS #
114676-59-4
PubChem CID
12764090
Appearance
White to off-white solid powder
Melting Point
121-123 ºC
LogP
0.013
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
2
Heavy Atom Count
11
Complexity
137
Defined Atom Stereocenter Count
2
SMILES
COC(=O)[C@H]1C[C@H](CN1)O.Cl
InChi Key
KLGSHNXEUZOKHH-TYSVMGFPSA-N
InChi Code
InChI=1S/C6H11NO3.ClH/c1-10-6(9)5-2-4(8)3-7-5;/h4-5,7-8H,2-3H2,1H3;1H/t4-,5-;/m1./s1
Chemical Name
methyl (2R,4R)-4-hydroxypyrrolidine-2-carboxylate;hydrochloride
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 5.5060 mL 27.5300 mL 55.0600 mL
5 mM 1.1012 mL 5.5060 mL 11.0120 mL
10 mM 0.5506 mL 2.7530 mL 5.5060 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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