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BET-IN-19

BET-IN-19 (Compound 146) is a BET inhibitor.
BET-IN-19
BET-IN-19 Chemical Structure CAS No.: 1643947-30-1
Product category: Epigenetic Reader Domain
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
BET-IN-19 (Compound 146) is a BET inhibitor. BET-IN-19 inhibits hIL-6? mRNA transcription (IC50 ≤ 0.3 uM) and c-myc activity (IC50 ≤ 0.3 uM) in human AML MV4-11 cells. BET-IN-19 inhibits/disrupts the binding of tetraacetylated histone H4 to BRD4 bromodomain 1 (IC50 ≤ 0.3 uM).
BET-IN-19 (also known as ZEN-3694) is an orally bioavailable BET (bromodomain and extra-terminal) inhibitor that targets bromodomain-containing proteins, particularly BRD4. It is a potent research compound being investigated for its ability to downregulate the expression of oncogenes like c-Myc and androgen receptor (AR) signaling.
Biological Activity I Assay Protocols (From Reference)
Targets
BRD4 (Bromodomain-containing protein 4) and other BET family members (BRD2, BRD3). BET-IN-19 binds to the acetyl-lysine recognition pocket in the bromodomains of these proteins, displacing them from chromatin. This disrupts the transcriptional machinery at key genes, leading to the downregulation of critical oncogenes such as c-Myc, Bcl-2, and the androgen receptor. It is a potent and selective inhibitor.
ln Vitro
BET-IN-19 is a potent inhibitor. It inhibits tetra-acetylated histone H4 binding to BRD4 bromodomain 1 with an IC50 ≤ 0.3 microM. In human AML MV4-11 cells, it inhibits hIL-6 mRNA transcription and c-myc activity, each with an IC50 ≤ 0.3 microM. It also inhibits the growth of prostate cancer cell lines by downregulating AR-signaling.
ln Vivo
In animal models, particularly those for metastatic castration-resistant prostate cancer (mCRPC) and acute myeloid leukemia (AML), BET-IN-19 (ZEN-3694) has demonstrated efficacy. Oral administration leads to the down-regulation of AR-signaling, c-Myc expression, and tumor growth inhibition. It is currently in clinical development for these indications.
Enzyme Assay
BET-IN-19 is a potent inhibitor of the BET family. For binding studies, the BRD4 bromodomain 1 is incubated with various concentrations of BET-IN-19 (0.1 nM-100 uM) in a reaction buffer (50 mM HEPES, pH 7.5, 150 mM NaCl, 0.01% BSA). A fluorescently labeled acetylated histone H4 peptide is added, and the mixture is incubated for 60 minutes at room temperature. The FRET (fluorescence resonance energy transfer) signal is measured, and the IC50 is calculated by a dose-response curve. The compound shows an IC50 ≤ 0.3 microM in this assay.
Cell Assay
Human acute myeloid leukemia MV4-11 cells are seeded in 96-well plates (4×103 cells/well) and treated with varying concentrations of BET-IN-19 (e.g., 0.1 nM-10 uM) for 72 hours. Cell viability is assessed by the CellTiter-Glo luminescent assay. For gene expression analysis, cells are treated for 6-24 hours, and total RNA is extracted. c-myc and hIL-6 mRNA levels are quantified by qPCR, showing an IC50 ≤ 0.3 microM. Apoptosis can be assessed by measuring caspase 3/7 activity and by flow cytometry using Annexin V/PI staining.
Animal Protocol
A typical in vivo protocol involves establishing subcutaneous xenografts of MV4-11 (AML) or 22Rv1 (mCRPC) cells in immunodeficient mice. When tumors reach ~100-200 mm3, mice are randomized to receive BET-IN-19 by oral gavage at doses ranging from 10-50 mg/kg, daily or every other day, for 2-4 weeks. Tumor volume is measured twice weekly with calipers. Tumors are harvested at the end of the study for gene expression (qPCR) and protein (IHC, Western blot) analysis of c-Myc, AR, and proliferation markers like Ki67. Body weight is monitored as a general health indicator.
ADME/Pharmacokinetics
BET-IN-19 (ZEN-3694) is an orally bioavailable small molecule. In preclinical models, it exhibits favorable pharmacokinetic properties suitable for once-daily oral dosing. It is well-absorbed and has a plasma half-life that supports sustained target inhibition. It is primarily metabolized in the liver, likely by CYP3A4 enzymes, and shows good oral bioavailability (likely >50% in rodents).
Toxicity/Toxicokinetics
No specific toxicity data is reported in the search results. As a BET inhibitor, the primary on-target toxicity in preclinical models and clinical trials includes gastrointestinal effects (nausea, diarrhea, vomiting), fatigue, thrombocytopenia, and hepatotoxicity (elevated liver enzymes). At therapeutic doses, it is generally manageable. However, the safety profile for BET-IN-19 specifically has not been detailed in these search results.
References

[1]. Novel bicyclic bromodomain inhibitors. Patent. WO2015002754 A2.

Additional Infomation
ZEN-3694 is being studied in the clinical trial NCT04840589 (testing the efficacy of ZEN003694 in combination with or without ipilimumab for the treatment of solid tumors).
BET-IN-19 is also known as ZEN-3694 and is a clinical-stage BET inhibitor. It has been studied in Phase 1/2 clinical trials in combination with other agents, such as enzalutamide for metastatic castration-resistant prostate cancer (mCRPC) and other solid tumors, and with taxanes for ovarian cancer. It downregulates AR-signaling, c-myc, and BRD4 target genes. The molecular formula is C19H19N5O, with a molecular weight of 333.39 g/mol.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C19H19N5O
Molecular Weight
333.387063264847
Exact Mass
333.158
CAS #
1643947-30-1
Related CAS #
1643947-30-1;2412912-33-3 (mesylate);2413439-08-2 (phosphate);
PubChem CID
121375819
Appearance
Off-white to light yellow solid powder
LogP
3.5
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
4
Heavy Atom Count
25
Complexity
444
Defined Atom Stereocenter Count
0
SMILES
CC1=C(C(=NO1)C)C2=CC3=C(N=C2)N=C(N3CC4=CC=CC=C4)NC
InChi Key
VUFGOHIETLJZRG-UHFFFAOYSA-N
InChi Code
InChI=1S/C19H19N5O/c1-12-17(13(2)25-23-12)15-9-16-18(21-10-15)22-19(20-3)24(16)11-14-7-5-4-6-8-14/h4-10H,11H2,1-3H3,(H,20,21,22)
Chemical Name
1-benzyl-6-(3,5-dimethyl-1,2-oxazol-4-yl)-N-methylimidazo[4,5-b]pyridin-2-amine
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.9995 mL 14.9975 mL 29.9949 mL
5 mM 0.5999 mL 2.9995 mL 5.9990 mL
10 mM 0.2999 mL 1.4997 mL 2.9995 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
Title:The COSMYC Trial (COmbined Suppression of MYC)
Status:Recruiting
updateDate:2025-09-17
Ctid:NCT06922318

Link: https://clinicaltrials.gov/ct2/show/NCT06922318

Conditions:Metastatic Castration-resistant Prostate Cancer
Interventions:Luteinizing hormone-releasing hormone (LHRH) analogue
Phase:Phase 2
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