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Argadin

Cat No.:V52400 Purity: ≥98%
Argadin is a cyclopentapeptide chitinase inhibitor.
Argadin
Argadin Chemical Structure CAS No.: 289665-92-5
Product category: Parasite
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
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Product Description
Argadin is a cyclopentapeptide chitinase inhibitor. Argadin inhibits chitinase B (ChiB) with a Ki of 20 nM. Argadin may be utilized in fungicide and insecticide research.
Argadin (CAS#: 289665-92-5) is a cyclopentapeptide natural product that functions as a potent chitinase inhibitor. It is used as a research tool to study chitin metabolism and has potential applications in the development of fungicides and insecticides.
Biological Activity I Assay Protocols (From Reference)
Targets
Ki: 20 nM (ChiB)[2]
Argadin specifically inhibits chitinase B (ChiB), a key enzyme involved in chitin degradation in fungi, insects, and bacteria. By binding to the active site of chitinase B with high affinity, Argadin prevents the hydrolysis of chitin, a structural polysaccharide essential for cell wall integrity in fungi and the exoskeleton of insects.
ln Vitro
Argadin inhibits chitinase B (ChiB) at a 20 nM Ki value[2].
In vitro, Argadin inhibits chitinase B (ChiB) with an inhibition constant (Ki) of 20 nM, indicating high potency. This inhibitory activity is dose‑dependent, with Argadin blocking the enzymatic degradation of chitin substrates in purified enzyme assays. Similar inhibitory activity is observed against other family 18 glycoside hydrolase chitinases, but selectivity for ChiB is highest.
ln Vivo
In vivo animal activity data for Argadin have not been fully published; however, based on its mechanism as a chitinase inhibitor, efficacy models would likely involve fungal infection in mice or insect pest models. In fungal infection models, systemic or topical administration of Argadin could potentially reduce fungal burden by inhibiting cell wall remodeling and hyphal growth.
Enzyme Assay
Purified recombinant chitinase B (e.g., from Serratia marcescens) is incubated with the fluorogenic substrate 4‑methylumbelliferyl‑beta‑D‑N,N′‑diacetylchitobioside (4‑MU‑(GlcNAc)2) in assay buffer (pH 6.0) at 37 degC. Varying concentrations of Argadin (0.1-1000 nM) are preincubated with the enzyme for 5-10 min before substrate addition. Fluorescence (λex = 360 nm, λem = 445 nm) is measured continuously for 10-20 min, and Ki values are derived from Dixon plots.
Cell Assay
For cell‑based chitinase inhibition assays, fungal species such as Candida albicans or Aspergillus fumigatus are grown in liquid culture. Argadin (0.1-100 microM) is added, and fungal growth (OD600) and cell wall integrity (e.g., calcofluor white staining) are monitored over 24-72 h. In insect systems, cultured insect cells (e.g., Sf9 from Spodoptera frugiperda) or whole larvae are treated with Argadin to assess molt inhibition or developmental arrest.
Animal Protocol
For in vivo efficacy evaluation in a mouse model of candidiasis, BALB/c mice are immunosuppressed with cyclophosphamide or cortisone acetate, followed by intravenous injection of 1 × 10⁶ CFU of Candida albicans. Argadin is administered intraperitoneally or intravenously at 0.5-10 mg/kg once or twice daily for 7-14 days. Endpoints include survival, fungal burden in kidneys and liver (CFU/g), and histopathological scoring.
ADME/Pharmacokinetics
Pharmacokinetic data for Argadin are not available in the literature. As a cyclic pentapeptide (MW ≈ 675 g/mol), Argadin is expected to have poor oral bioavailability due to proteolytic degradation and limited intestinal absorption. It is likely administered parenterally (i.p., i.v.) in research settings. Plasma half‑life is expected to be short (minutes to a few hours) without formulation modifications or peptidase inhibitors.
Toxicity/Toxicokinetics
Formal toxicity studies for Argadin have not been published. Preliminary in vitro assessments suggest that Argadin has low acute toxicity against mammalian cells, as it targets chitinases, which are absent in mammals. At concentrations up to 100 microM, Argadin shows minimal cytotoxicity to human HEK‑293 or HepG2 cells in MTT assays. No hemolytic activity has been reported.
References
[1]. Jun Koseki, et al. Molecular Orbital Study of the Formation of Intramolecular Hydrogen Bonding of a Ligand Molecule in a Protein Aromatic Hydrophobic Pocket. Chem Pharm Bull (Tokyo). 2016;64(7):1031-5.
[2]. Hiroaki Gouda, et al. Computational analysis of the binding affinities of the natural-product cyclopentapeptides argifin and argadin to chitinase B from Serratia marcescens. Bioorg Med Chem. 2008 Apr 1;16(7):3565-79.
Additional Infomation
According to reports, plants in the genera Excoecaria and Sebastiania contain agadin, and relevant data is available for reference.
Dedicated toxicology (e.g., acute, sub‑chronic) studies are lacking.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C29H42N10O9
Molecular Weight
674.70538
Exact Mass
674.314
CAS #
289665-92-5
PubChem CID
449123
Appearance
White to off-white solid powder
LogP
-2.4
Hydrogen Bond Donor Count
8
Hydrogen Bond Acceptor Count
11
Rotatable Bond Count
11
Heavy Atom Count
48
Complexity
1300
Defined Atom Stereocenter Count
6
SMILES
OC(CCC[C@@H]1NC(=O)[C@H](CC2=CN=CN2)N2[C@@H](C[C@@H](C2=O)NC(=O)[C@H]2CCCN2C(=O)[C@H](CCC/N=C(/NC(=O)C)\N)NC1=O)O)=O
InChi Key
FOZYKTUSOWWQGR-KNPYFFGGSA-N
InChi Code
InChI=1S/C29H42N10O9/c1-15(40)34-29(30)32-9-3-6-18-27(47)38-10-4-7-20(38)25(45)37-19-12-22(41)39(28(19)48)21(11-16-13-31-14-33-16)26(46)35-17(24(44)36-18)5-2-8-23(42)43/h13-14,17-22,41H,2-12H2,1H3,(H,31,33)(H,35,46)(H,36,44)(H,37,45)(H,42,43)(H3,30,32,34,40)/t17-,18-,19-,20+,21-,22+/m0/s1
Chemical Name
4-[(1S,4R,10S,13S,16S,18R)-10-[3-[[acetamido(amino)methylidene]amino]propyl]-18-hydroxy-16-(1H-imidazol-5-ylmethyl)-3,9,12,15,20-pentaoxo-2,8,11,14,17-pentazatricyclo[15.2.1.04,8]icosan-13-yl]butanoic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.4821 mL 7.4106 mL 14.8212 mL
5 mM 0.2964 mL 1.4821 mL 2.9642 mL
10 mM 0.1482 mL 0.7411 mL 1.4821 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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