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Necrostatin 2 R-isomer

Alias: Necrostatin-2 R-isomer; Necrostatin 2; (±)-Necrostatin-2; Necrostatin-2 racemate; 7-Cl-O-Nec-1; Nec-1S
Cat No.:V3292 Purity: ≥98%
Necrostatin 2 R-isomer is the R-enantiomer of Necrostatin 2 (also known asNecrostatin-2, Necrostatin-2 racemate, (±)-Necrostatin-2, 7-Cl-O-Nec-1 and Nec-1s) which is a potent necroptosis inhibitor with EC50 of 50 nM.
Necrostatin 2 R-isomer
Necrostatin 2 R-isomer Chemical Structure CAS No.: 852391-19-6
Product category: RIP kinase
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
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25mg
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Other Forms of Necrostatin 2 R-isomer:

  • Necrostatin-2 racemate
  • Necrostatin 2 S enantiomer
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description
Necrostatin 2 (also known as Necrostatin-2, Necrostatin-2 racemate, (±)-Necrostatin-2, 7-Cl-O-Nec-1 and Nec-1s) is a powerful necroptosis inhibitor with an EC50 of 50 nM. It is a racemic mixture that prevents the autophosphorylation of the receptor-interacting protein kinase 1 (RIPK1). A controlled caspase-independent cell death mechanism called necroptosis produces morphological characteristics that resemble necrosis. It can be brought on by TNF-alpha-treated human Jurkat T cells with a FADD-deficient variant. Additionally effective in an animal model of ischemic stroke, necrostatin 2 was. After being administered intravenously, necrostatin 2 showed moderate pharmacokinetic properties and quickly entered the central nervous system.
Necrostatin 2 R-isomer (Nec-1s, 7-Cl-O-Nec-1, CAS#: 852391-19-6) is a potent inhibitor of necroptosis with an EC50 of 50 nM. It is the R-isomer of (±)-Necrostatin-2 and is a superior inhibitor that can be used in vivo without the paradoxical sensitizing effect in TNF-induced lethality.
Biological Activity I Assay Protocols (From Reference)
Targets
Necroptosis; RIPK1
This compound targets receptor-interacting protein kinase 1 (RIPK1), a key regulator of necroptosis, a regulated caspase-independent cell death pathway morphologically resembling necrosis. By inhibiting RIPK1 autophosphorylation, Necrostatin 2 R-isomer blocks the necroptotic signaling pathway. It is effective at minimizing brain injuries.
ln Vitro
Nec-1s is a potent inhibitor of RIPK1 and cellular necroptosis while lacking IDO inhibitory activity[1].
In vitro, Necrostatin 2 R-isomer is a potent inhibitor of necroptosis with an EC50 of 50 nM. It inhibits RIPK1 autophosphorylation and blocks the downstream signaling cascade that leads to necroptotic cell death. Detailed in vitro activity data in specific cell lines are not provided.
ln Vivo
Necrostatin 2 R-isomer(Nec-1s) is effective at minimizing brain injuries. It is a superior inhibitor that can be used in vivo and does not have a paradoxical sensitizing effect in TNF-induced lethality[1].
Necrostatin 2 R-isomer(Nec-1s) differs from Nec-1 in that it has a number of favorable pharmacokinetic and pharmacodynamic properties. Because of their lower in vivo and in vitro toxicity, Nec-1s have a safer safety profile than Nec-1[2].
In vivo, Necrostatin 2 R-isomer is effective at minimizing brain injuries. It is a superior inhibitor that can be used in vivo and does not have the paradoxical sensitizing effect in TNF-induced lethality that is observed with some other necroptosis inhibitors. It reduces inflammation by modulating apoptosis.
Enzyme Assay
Necrostatin 2 (also known as Necrostatin-2, Necrostatin-2 racemate, (±)-Necrostatin-2, 7-Cl-O-Nec-1 and Nec-1s, is a potent necroptosis inhibitor with EC50 of 50 nM.
RIPK1 inhibitory activity is determined using cell-free kinase assays with recombinant RIPK1 enzyme, a peptide substrate, and ATP. Phosphorylation of the substrate is measured, and IC50 or EC50 values are calculated from dose-response curves.
Cell Assay
Cells were treated with indicated concentrations of drug.
Cell-based assays for Necrostatin 2 R-isomer use cell lines that are sensitive to necroptotic stimuli (e.g., TNF-α + zVAD + SM-164). Cells are treated with the compound, and cell death is measured by propidium iodide staining or LDH release. Inhibition of RIPK1 autophosphorylation is assessed by Western blot.
Animal Protocol




In vivo animal studies for Necrostatin 2 R-isomer are conducted in mouse models of brain injury or TNF-induced systemic inflammatory response syndrome (SIRS). The compound is administered, and tissue injury, inflammation markers, and survival are assessed. Its lack of paradoxical sensitizing effect makes it suitable for in vivo use.
ADME/Pharmacokinetics
Necrostatin 2 R-isomer has the molecular formula C₁₃H₁₂ClN₃O₂ with a molecular weight of 277.71. It is the R-isomer of (±)-Necrostatin-2. Detailed pharmacokinetic parameters such as half-life, bioavailability, and tissue distribution are not disclosed in the available references.
Toxicity/Toxicokinetics
No specific toxicity data are detailed in the available references. However, the compound is described as a superior inhibitor that can be used in vivo without the paradoxical sensitizing effect in TNF-induced lethality, suggesting a favorable safety profile compared to other necroptosis inhibitors.
References

[1]. Cell Death Dis . 2012 Nov 29;3(11):e437.

[2]. Molecules . 2018 Aug 3;23(8):1946.

[3]. Cell Rep . 2022 Oct 4;41(1):111434.

Additional Infomation
Necrostatin 2 R-isomer (also known as Nec-1s, 7-Cl-O-Nec-1) is a research compound not yet approved for clinical use. It is a potent inhibitor of necroptosis that targets RIPK1. Its lack of paradoxical sensitizing effect makes it a valuable tool for studying necroptosis in vivo and for exploring therapeutic applications in diseases where necroptosis plays a role, such as brain injury and inflammatory disorders.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C13H12CLN3O2
Molecular Weight
277.71
Exact Mass
277.062
Elemental Analysis
C, 56.23; H, 4.36; Cl, 12.77; N, 15.13; O, 11.52
CAS #
852391-19-6
Related CAS #
Necrostatin 2 racemate;852391-15-2;Necrostatin 2 S enantiomer;852391-20-9
PubChem CID
11288934
Appearance
White to light yellow solid powder
LogP
1.491
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
2
Rotatable Bond Count
2
Heavy Atom Count
19
Complexity
403
Defined Atom Stereocenter Count
1
SMILES
C([C@H]1NC(=O)N(C)C1=O)C1=CNC2C(=CC=CC1=2)Cl
InChi Key
WIKGAEMMNQTUGL-SNVBAGLBSA-N
InChi Code
InChI=1S/C13H12ClN3O2/c1-17-12(18)10(16-13(17)19)5-7-6-15-11-8(7)3-2-4-9(11)14/h2-4,6,10,15H,5H2,1H3,(H,16,19)/t10-/m1/s1
Chemical Name
(5R)-5-[(7-chloro-1H-indol-3-yl)methyl]-3-methylimidazolidine-2,4-dione
Synonyms
Necrostatin-2 R-isomer; Necrostatin 2; (±)-Necrostatin-2; Necrostatin-2 racemate; 7-Cl-O-Nec-1; Nec-1S
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ~10 mM
Water: N/A
Ethanol: N/A
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (9.00 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (9.00 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (9.00 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.6009 mL 18.0044 mL 36.0088 mL
5 mM 0.7202 mL 3.6009 mL 7.2018 mL
10 mM 0.3601 mL 1.8004 mL 3.6009 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • Activity of Nec-1, Nec-1i and Nec-1s in an in vitro RIPK kinase assay and a cellular assay for necroptosis. Cell Death Dis . 2012 Nov 29;3(11):e437.
  • Molecular docking of substrates, inhibitors and Nec-1 variants on human IDO. Cell Death Dis . 2012 Nov 29;3(11):e437.
  • Molecular docking of substrates, inhibitors and Nec-1 variants on human IDO representing a similar docking pose for all ligands. Cell Death Dis . 2012 Nov 29;3(11):e437.
  • Nec-1/1-M-Trp and Nec-1i, but not Nec-1s, inhibit IDO activity. Cell Death Dis . 2012 Nov 29;3(11):e437.
  • Nec-1 and Nec-1i show a paradoxical dose response in TNF-induced SIRS. Cell Death Dis . 2012 Nov 29;3(11):e437.
  • Nec-1s does not show a paradoxical dose response in TNF-induced SIRS. Cell Death Dis . 2012 Nov 29;3(11):e437.
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