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Cytidine 5'-diphosphate trisodium salt (CDP)

Alias: CDP; Cytidine 5'-diphosphate trisodium salt
Cat No.:V53214 Purity: ≥98%
Cytidine 5'-diphosphate trisodium salt (CDP) is produced by the transfer of a phosphate group from ATP to cytidine monophosphate (CMP) catalyzed by uridine monophosphate kinase (UMPK).
Cytidine 5'-diphosphate trisodium salt (CDP)
Cytidine 5'-diphosphate trisodium salt (CDP) Chemical Structure CAS No.: 34393-59-4
Product category: DNA(RNA) Synthesis
This product is for research use only, not for human use. We do not sell to patients.
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Other Forms of Cytidine 5'-diphosphate trisodium salt (CDP):

  • Cytidine diphosphate
  • Cytidine diphosphate-d13 dilithium
  • Cytidine diphosphate-13C9 dilithium
  • Citicoline-d9 sodium (Cytidine diphosphate-choline-d9 (sodium); CDP-Choline-d9(sodium); Cytidine 5'-diphosphocholine-d9 (sodium))
  • Cytidine diphosphate-15N3 dilithium
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
Cytidine 5'-diphosphate trisodium salt (CDP) is produced by the transfer of a phosphate group from ATP to cytidine monophosphate (CMP) catalyzed by uridine monophosphate kinase (UMPK). Cytidine 5'-diphosphate trisodium salt can be utilized in the synthesis of DNA and RNA to generate cytidine triphosphate (CTP).
Cytidine 5'-diphosphate trisodium salt (CDP) is a nucleotide consisting of cytidine linked to two phosphate groups. It is a precursor in the biosynthesis of cytidine triphosphate (CTP) and is involved in phospholipid synthesis. CDP is used as a substrate in enzymatic assays and in research on nucleotide metabolism. The compound plays a role in the synthesis of CDP-choline and CDP-ethanolamine, which are important for membrane phospholipid biosynthesis.
Biological Activity I Assay Protocols (From Reference)
Targets
CDP targets enzymes involved in nucleotide metabolism and phospholipid synthesis. It serves as a substrate for nucleoside diphosphate kinase in the synthesis of CTP. CDP is also a substrate for choline-phosphate cytidylyltransferase and ethanolamine-phosphate cytidylyltransferase in the synthesis of CDP-choline and CDP-ethanolamine, respectively, which are key intermediates in phospholipid biosynthesis.
ln Vitro
CDP demonstrates in vitro activity as a substrate for various enzymes involved in nucleotide and phospholipid metabolism. It is used in enzymatic assays to measure the activity of nucleoside diphosphate kinase, choline-phosphate cytidylyltransferase, and ethanolamine-phosphate cytidylyltransferase. The compound's activity is assessed by its ability to support these enzymatic reactions.
ln Vivo
For the diagnosis and investigation of CDP-l-ribitol pyrophosphorylase A (CRPPA) muscular dystrophy, CDP-ribitol can be utilized [3].
CDP is an endogenous nucleotide that is involved in nucleotide metabolism and phospholipid synthesis in vivo. It plays a role in the synthesis of CDP-choline and CDP-ethanolamine, which are essential for membrane phospholipid biosynthesis. CDP is also involved in the synthesis of CTP.
Enzyme Assay
In vitro enzyme assays for CDP involve measuring its conversion to CTP by nucleoside diphosphate kinase, or its conversion to CDP-choline or CDP-ethanolamine by the respective cytidylyltransferases. The assays typically measure the formation of products using spectrophotometric, radiometric, or HPLC-based methods.
Cell Assay
In vitro cellular assays for CDP are not typically performed, as the compound is a nucleotide used as a substrate in enzymatic assays. Its role in phospholipid synthesis can be studied in cell culture models by measuring the incorporation of labeled precursors into phospholipids.
Animal Protocol
CDP is not typically administered in animal experiments as a therapeutic agent. It is an endogenous nucleotide that is involved in normal cellular metabolism. Its role in phospholipid synthesis makes it essential for cell membrane integrity and function.
ADME/Pharmacokinetics
CDP is a naturally occurring nucleotide that is synthesized intracellularly. Its concentration is tightly regulated within cells. CDP is a precursor in the biosynthesis of CTP and is involved in phospholipid synthesis. The compound is used as a research reagent in biochemical assays.
Toxicity/Toxicokinetics
CDP is a naturally occurring nucleotide and is not considered toxic at physiological concentrations. The compound is intended for research use only. Standard laboratory safety precautions should be followed when handling this compound.
References

[1]. Purine and pyrimidine nucleotide synthesis and metabolism. Arabidopsis Book. 2002;1:e0018.

[2]. Microglial cells in the retina of Carassius auratus: effects of optic nerve crush. J Comp Neurol. 2000 Feb 21;417(4):431-47.

[3]. Cytidine Diphosphate-Ribitol Analysis for Diagnostics and Treatment Monitoring of Cytidine Diphosphate-l-Ribitol Pyrophosphorylase A Muscular Dystrophy. Clin Chem. 2019 Oct;65(10):1295-1306.

Additional Infomation
Cytidine 5'-diphosphate trisodium salt (CDP) (CAS#: 34393-59-4) has the molecular formula C9H12N3O11P2·3Na and a molecular weight of 469.12. It is a nucleotide consisting of cytidine linked to two phosphate groups. CDP is involved in nucleotide metabolism and phospholipid synthesis. It is for research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Exact Mass
468.96
CAS #
34393-59-4
Related CAS #
Cytidine diphosphate;63-38-7
PubChem CID
23519589
Appearance
Off-white to light yellow solid powder
LogP
0
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
11
Rotatable Bond Count
5
Heavy Atom Count
28
Complexity
671
Defined Atom Stereocenter Count
4
InChi Key
JENUKVZGXGULDX-LLWADOMFSA-K
InChi Code
InChI=1S/C9H15N3O11P2.3Na/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18;;;/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H2,10,11,15)(H2,16,17,18);;;/q;3*+1/p-3/t4-,6-,7-,8-;;;/m1.../s1
Chemical Name
trisodium;[[(2R,3S,4R,5R)-5-(4-amino-2-oxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-oxidophosphoryl] phosphate
Synonyms
CDP; Cytidine 5'-diphosphate trisodium salt
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: (1). This product requires protection from light (avoid light exposure) during transportation and storage.  (2). Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
H2O : ~250 mg/mL (~532.9 mM)
DMSO : < 1 mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: 100 mg/mL (213.17 mM) in PBS (add these co-solvents sequentially from left to right, and one by one), clear solution; with sonication.

 (Please use freshly prepared in vivo formulations for optimal results.)
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
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Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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