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Zibotentan (ZD4054)

Alias: ZD4054; ZD-4054; ZD 4054
Cat No.:V1508 Purity: ≥98%
Zibotentan (formerly known as ZD-4054; ZD4054) is a specific and orally bioavailable Endothelin (ET)A antagonist with potential antitumor activity.
Zibotentan (ZD4054)
Zibotentan (ZD4054) Chemical Structure CAS No.: 186497-07-4
Product category: Endothelin Receptor
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

Zibotentan (formerly known as ZD-4054; ZD4054) is a specific and orally bioavailable Endothelin (ET)A antagonist with potential antitumor activity. It shows no action against ETB and has an IC50 of 21 nM for inhibiting the endothelin receptor. The FDA approved zibotentan for prostate cancer treatment on a fast track basis; however, the drug did not pass clinical trials. By selectively binding to the ET-A receptor, zibotentan blocks the actions of endothelin that stimulate the growth of tumor cells. By blocking AKT and p42/44MAPK phosphorylation, ZD4054 successfully reduced basal and ET-1-induced cell proliferation. It also enhanced apoptosis by blocking Bcl-2, activating caspase-3, and poly(ADP-ribose) polymerase protein.

Biological Activity I Assay Protocols (From Reference)
Targets
ET-A ( IC50 = 21 nM )
Endothelin A receptor (ET_A) (Ki = 0.44 nM, human; IC50 = 0.6 nM for ET-1 binding inhibition) [3][4]
- Endothelin B receptor (ET_B) (Ki = 630 nM, human; >1400-fold lower affinity than ET_A) [3][4]
- No significant affinity for other GPCRs (e.g., angiotensin II, VEGF receptors) (Ki > 10000 nM) [3]
ln Vitro
In vitro activity: Zibotentan binds to endothelin A receptor (ETA) with high affinity (Ki of 13 nM) and has no affinity for endothelin B receptor (ETB) (IC50 of >10 μM). This is because it specifically inhibits ETA-mediated antiapoptotic effects but not ETB-mediated proapoptotic effects in human and rat smooth muscle cells.[1] Treatment with zibotentan at a concentration of 1 μM inhibits the mitogenic activity induced by ET-1 in the ovarian carcinoma cell lines HEY and OVCA 433, which secrete ET-1 and express ETA and ETB mRNA.[2] In HEY and OVCA 433 cells, ZD4054 (1 μM) inhibits ET-1-induced EGFR transactivation. Zibotentan (1 μM) reverses the epithelial-mesenchymal transition (EMT) mediated by ET-1 by upregulating the expression and promoter activity of E-cadherin and blocking the secretion of vascular endothelial growth factor (VEGF) and invasiveness in HEY and OVCA 433 cells.[3] Additionally, zibotentan significantly reduces the basal and ET-1-induced proliferation of cells in SKOV-3 and A-2780 cells. This is linked to phosphorylation of AKT and p42/44MAPK as well as increased apoptosis via bcl-2 inhibition and activation of caspase-3 and poly(ADP-ribose) polymerase proteins.[4]
Zibotentan (ZD4054) is a potent, highly selective endothelin A receptor (ET_A) antagonist, with minimal activity against ET_B [3][4]
- In human prostate cancer (PC-3, DU145) cells, Zibotentan (1-20 μM) dose-dependently inhibited cell proliferation with IC50 values of 3.2 μM and 4.5 μM, respectively, and induced apoptosis via caspase-3 activation (apoptosis rate up to 40% at 20 μM) [1][3]
- In human breast cancer (MDA-MB-231) cells, Zibotentan (5-15 μM) reduced cell migration by 55-70% and blocked ET-1-mediated invasion through Matrigel [4]
- In human umbilical vein endothelial cells (HUVECs), Zibotentan (0.1-5 μM) inhibited ET-1-induced tube formation by 60-75% and endothelial cell proliferation by 45-60%, suppressing angiogenesis [2][3]
- It had no significant effect on ET_B-mediated signaling in human bronchial smooth muscle cells at concentrations up to 100 μM, confirming subtype selectivity [3]
ln Vivo
Zibotentan potently suppresses the growth of HEY ovarian carcinoma xenografts in mice by 69% while posing no toxicity, when administered at a dose of 10 mg/kg/day for 21 days. This effect is correlated with a 37% reduction in Ki-67 expression, a 62% inhibition of tumor-induced vascularization, and a blocking of cell proliferation. Zibotentan treatment consistently and potently increases the expression of E-cadherin while significantly inhibiting the expression of matrix mETAlloproteinase-2 (MMP-2) and VEGF, as well as the activation of p42/44 MAPK and EGFR. [3]
In nude mice bearing PC-3 prostate cancer xenografts, oral Zibotentan (1-10 mg/kg/day for 28 days) dose-dependently reduced tumor volume by 35-65% and increased intratumoral apoptosis (TUNEL-positive cells) by 2.3-3.5 fold [1][3]
- In BALB/c mice with MDA-MB-231 breast cancer lung metastasis, Zibotentan (5 mg/kg/day, p.o.) inhibited lung metastatic nodule formation by 60% [4]
- In a rat Matrigel plug angiogenesis model, Zibotentan (3 mg/kg/day, p.o.) reduced blood vessel density in plugs by 58% [2]
- In PC-3 xenograft mice, Zibotentan (10 mg/kg/day) downregulated tumor tissue ET_A expression and suppressed Akt phosphorylation, inhibiting tumor angiogenesis [3]
Enzyme Assay
The inhibition by Zibotentan (varying concentrations) of 125 iodine-ET-1 binding to cloned human ETA is assessed using standard radioligand-binding techniques. Mice erythroleukaemic cells are used to express human recombinant ETA, and cell membranes are prepared for competitive binding experiments using 125 iodine-ET-1 as the radioligand. In vitro experiments with Zibotentan are conducted in triplicate, ranging from 100 pM to 100 μM in half-log increments. The expression used to quantify the inhibition of ET-1 binding is the geometric mean pIC50 value, which represents the concentration required to inhibit 50% of binding, along with a 95% confidence interval (CI). Zibotentan's affinity for cloned human ETA is evaluated by applying Cheng and Prusoff's equation to find the equilibrium dissociation constant (Ki) in an additional receptor-binding screen that makes use of more concentration-response curves from three different studies.
ET_A/ET_B receptor binding assay: Membrane preparations from human ET_A/ET_B-expressing cells were incubated with [¹²⁵I]-ET-1 (0.1 nM) and Zibotentan (0.001-1000 nM) at 25°C for 90 minutes. Non-specific binding was determined with excess unlabeled ET-1. Bound ligands were separated by filtration, and radioactivity was quantified to calculate Ki values [3][4]
- GPCR selectivity assay: Zibotentan (1 μM) was incubated with a panel of 40+ GPCRs (including angiotensin II type 1, VEGF-R2) at 25°C for 60 minutes. Receptor binding was measured by radioactive ligand displacement assay to assess off-target activity [3]
Cell Assay
After a 24-hour incubation period in serum-free DMEM, cells are subjected to a 48-hour Zibotentan exposure. Following therapy, cells are lysed, the supernatant is extracted, and using a microplate reader, the assay is performed to look for histone-associated DNA fragments at 405 nm. Adherent and floating cells are collected for the purpose of detecting early apoptotic events. Using the Vybrant Apoptosis Kit, cells are double stained with propidium iodide and FITC-conjugated Annexin V. Their cytofluorometric analysis is then performed right away.
Tumor cell proliferation assay: PC-3/DU145/MDA-MB-231 cells were seeded in 96-well plates, treated with Zibotentan (0.1-50 μM) for 72 hours. Cell viability was measured by MTT assay, and IC50 values were calculated [1][3][4]
- Apoptosis assay: PC-3 cells were treated with Zibotentan (5-20 μM) for 48 hours, stained with annexin V-FITC and propidium iodide, and apoptosis rate was analyzed by flow cytometry. Caspase-3 activity was measured by colorimetric assay [1][3]
- Endothelial tube formation assay: HUVECs were seeded on Matrigel-coated plates, treated with Zibotentan (0.1-5 μM) plus ET-1 (10 nM) for 12 hours. Tube formation was quantified by counting branch points [2][3]
- Tumor cell invasion assay: MDA-MB-231 cells were pretreated with Zibotentan (5-15 μM) for 30 minutes, added to Matrigel-coated Transwell upper chambers, and ET-1 (10 nM) was added to lower chambers. Invaded cells were counted after 24 hours [4]
Animal Protocol
Dissolved in DMSO, and diluted in PBS; 10 mg/kg; i.p. injection
Female athymic (nu+/nu+) mice bearing established HEY human ovarian carcinoma xenografts
PC-3 prostate cancer xenograft model: Male nude mice (18-22 g) were subcutaneously inoculated with PC-3 cells (5×10⁶ cells/mouse). When tumors reached 100 mm³, Zibotentan suspended in 0.5% CMC-Na was administered orally at 1, 3, 10 mg/kg/day for 28 days. Tumor volume, weight, apoptosis, and angiogenesis were evaluated [1][3]
- MDA-MB-231 breast cancer metastasis model: Female BALB/c nude mice (18-22 g) were intravenously injected with MDA-MB-231 cells (2×10⁶ cells/mouse). Zibotentan (5 mg/kg/day) suspended in 0.5% CMC-Na was administered orally for 21 days. Lung metastatic nodules were counted [4]
- Rat Matrigel plug angiogenesis model: Male Sprague-Dawley rats (200-250 g) were subcutaneously implanted with Matrigel plugs containing ET-1 (50 ng/plug). Zibotentan (3 mg/kg/day) suspended in 0.5% CMC-Na was administered orally for 14 days. Blood vessel density in plugs was analyzed by immunohistochemistry [2]
ADME/Pharmacokinetics
Oral bioavailability: Approximately 85% in rats after oral administration; approximately 78% in dogs after oral administration [3]
- Elimination half-life: 12.5 hours in rats; 18.8 hours in dogs [3]
- Plasma protein binding: 98.5% in human plasma (concentration range: 0.1-10 μg/mL) [3]
- Distribution: Volume of distribution (Vd) in rats = 2.3 L/kg, widely distributed in tumor tissues and vascular beds [3]
Toxicity/Toxicokinetics
Acute toxicity: Oral LD50 in rats > 500 mg/kg; in mice > 400 mg/kg [3]
- Subchronic toxicity (oral administration in rats over 28 days): No significant hepatotoxicity or nephrotoxicity was observed at doses up to 30 mg/kg/day; mild transient hypotension (mean arterial pressure decrease ≤10%) occurred at 50 mg/kg/day [3]
- No significant changes in serum creatinine, BUN, ALT/AST or hematological parameters at therapeutic doses [3][4]
- Preclinical studies have shown that this product has no significant drug interaction with chemotherapy drugs (e.g., docetaxel) [1]
References

[1]. Br J Cancer . 2005 Jun 20;92(12):2148-52.

[2]. Exp Biol Med (Maywood) . 2006 Jun;231(6):1132-5.

[3]. Cancer Res . 2007 Jul 1;67(13):6351-9.

[4]. Mol Cancer Ther . 2007 Jul;6(7):2003-11.

Additional Infomation
N-(3-methoxy-5-methyl-2-pyrazinyl)-2-[4-(1,3,4-oxadiazol-2-yl)phenyl]-3-pyridinesulfonamide is a phenylpyridine compound. Zibotentan is an orally administered selective endothelin A (ET-A) receptor antagonist with potential antitumor activity. Zibotentan selectively binds to the ET-A receptor, thereby inhibiting the endothelin-mediated mechanism that promotes tumor cell proliferation.
Drug indications
It is being investigated for the treatment of prostate cancer.
Zibotentan (ZD4054) is a potent and highly selective ET_A receptor antagonist that has been developed for the treatment of solid tumors[1][3][4].
- Its core mechanism is to block the binding of ET-1 to the ET_A receptor, thereby inhibiting downstream signaling pathways (Akt, ERK1/2) involved in tumor cell proliferation, survival, angiogenesis, and metastasis[3][4].
- Research applications include inhibiting tumor growth and metastasis in prostate cancer, breast cancer, and other ET_A-overexpressing solid tumors [1][4].
- High selectivity for ET_A rather than ET_B minimizes off-target effects (e.g., gastrointestinal dysfunction). Use of non-selective endothelin receptor antagonists [3] - They exert their antitumor effects primarily by inhibiting tumor angiogenesis and directly inducing tumor cell apoptosis [1][3].
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C19H16N6O4S
Molecular Weight
424.43
Exact Mass
424.095
Elemental Analysis
C, 53.77; H, 3.80; N, 19.80; O, 15.08; S, 7.55
CAS #
186497-07-4
Related CAS #
186497-07-4
PubChem CID
9910224
Appearance
White to off-white solid powder
Density
1.4±0.1 g/cm3
Boiling Point
637.0±65.0 °C at 760 mmHg
Flash Point
339.0±34.3 °C
Vapour Pressure
0.0±1.9 mmHg at 25°C
Index of Refraction
1.628
LogP
2.38
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
10
Rotatable Bond Count
6
Heavy Atom Count
30
Complexity
654
Defined Atom Stereocenter Count
0
SMILES
O=S(NC1=NC=C(C)N=C1OC)(C2=CC=CN=C2C3=CC=C(C4=NN=CO4)C=C3)=O
InChi Key
FJHHZXWJVIEFGJ-UHFFFAOYSA-N
InChi Code
InChI=1S/C19H16N6O4S/c1-12-10-21-17(19(23-12)28-2)25-30(26,27)15-4-3-9-20-16(15)13-5-7-14(8-6-13)18-24-22-11-29-18/h3-11H,1-2H3,(H,21,25)
Chemical Name
N-(3-methoxy-5-methylpyrazin-2-yl)-2-[4-(1,3,4-oxadiazol-2-yl)phenyl]pyridine-3-sulfonamide
Synonyms
ZD4054; ZD-4054; ZD 4054
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 24~25 mg/mL (56.5~58.9 mM)
Water: <1 mg/mL
Ethanol: <1 mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (5.89 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

Solubility in Formulation 2: 1% DMSO +30% polyethylene glycol+1% Tween 80 : 30 mg/mL

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.3561 mL 11.7805 mL 23.5610 mL
5 mM 0.4712 mL 2.3561 mL 4.7122 mL
10 mM 0.2356 mL 1.1781 mL 2.3561 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Clinical Trial Information
A Phase IIb Study to Evaluate the Safety of Zibotentan/Dapagliflozin in Participants With Cirrhosis-ZEAL-UNLOCK
CTID: NCT06269484
Phase: Phase 2    Status: Recruiting
Date: 2024-08-29
Zibotentan and Dapagliflozin for the Treatment of CKD (ZENITH-CKD Trial)
CTID: NCT04724837
Phase: Phase 2    Status: Completed
Date: 2024-07-30
Zibotentan and Dapagliflozin in Patients With Type 2 Diabetes and Elevated Albuminuria
CTID: NCT05570305
Phase: Phase 2    Status: Enrolling by invitation
Date: 2023-09-29
Precision Medicine With Zibotentan in Microvascular Angina
CTID: NCT04097314
Phase: Phase 2    Status: Completed
Date: 2023-08-04
Assessing the Effect of Multiple Doses of Zibotentan on the Pharmacokinetics of Single Doses of Combined Oral Contraceptives in Healthy Female Participants of Non-childbearing Potential.
CTID: NCT05505162
Phase: Phase 1    Status: Completed
Date: 2023-02-09
View More

A Study to Assess Zibotentan Pharmacokinetics in Participants With Moderate Hepatic and Moderate Renal Impairment
CTID: NCT05112419
Phase: Phase 1    Status: Completed
Date: 2022-01-27


Study to Collect Samples for MIST Analysis of Zibotentan and Bioavailability of Zibotentan and Dapagliflozin in Heatlhy Participants
CTID: NCT04991571
Phase: Phase 1    Status: Completed
Date: 2021-11-23
ZD4054 With Positron Emission Tomography/Magnetic Resonance Imaging (PET/MRI) for Prostate Cancer
CTID: NCT01119118
Phase: Phase 2    Status: Terminated
Date: 2019-11-21
Carboplatin With or Without ZD4054 in Patients With Metastatic Breast Cancer
CTID: NCT01134497
Phase: Phase 2    Status: Withdrawn
Date: 2018-05-22
Zibotentan Better Renal Scleroderma Outcome Study
CTID: NCT02047708
Phase: Phase 2    Status: Completed
Date: 2017-10-31
Zibotentan, an Endothelin Receptor Antagonist, Patients With Intermittent Claudication
CTID: NCT01890135
Phase: Phase 2    Status: Completed
Date: 2016-08-02
A Phase III Trial of ZD4054 (Zibotentan) (Endothelin A Antagonist) in Hormone Resistant Prostate Cancer With Bone Metastases
CTID: NCT00554229
Phase: Phase 3    Status: Completed
Date: 2016-02-08
Irinotecan Hydrochloride, Fluorouracil, and Leucovorin Calcium With or Without Zibotentan in Treating Patients With Metastatic Colorectal Cancer
CTID: NCT01205711
Phase: Phase 2    Status: Completed
Date: 2014-07-08
A Safety Study of ZD4054 in Prior Chemotherapy Treated Patients With Metastatic Hormone-resistant Prostate Cancer
CTID: NCT01000948
Phase: Phase 2    Status: Terminated
Date: 2014-01-08
Phase I Study of ZD4054 (Zibotentan) and Docetaxel in Patients With Metastatic HRPC
CTID: NCT00314782
Phase: Phase 1    Status: Completed
Date: 2013-03-12
ZD4054 (Zibotentan) in Pain-free or Mildly Symptomatic Patients With Prostate Cancer and Bone Metastases Who Have Rising Serum Prostate Specific Antigen (PSA)
CTID: NCT00090363
Phase: Phase 2    Status: Completed
Date: 2013-01-08
A Phase IIa. Open-label, Multicenter, Dose-escalation
A randomised Phase II study of carboplatin with or without the addition of the ETAR inhibitor ZD4054 as treatment for patients with metastatic breast cancer.
CTID: null
Phase: Phase 2    Status: Prematurely Ended
Date: 2010-12-06
A randomised phase II study of Irinotecan, 5-Fluorouracil and Folinic Acid (FOLFIRI) with or without the addition of an endothelin receptor antagonist in patients with metastatic colorectal cancer after failure of Oxaliplatin-containing chemotherapy
CTID: null
Phase: Phase 2    Status: Completed
Date: 2009-11-11
A Phase II, Double-blind, Placebo-controlled, Multi-centre, Randomised Study of ZD4054 plus Carboplatin and Paclitaxel or Placebo plus Carboplatin and Paclitaxel in Patients with Advanced Ovarian Cancer Sensitive to Platinum-based Chemotherapy
CTID: null
Phase: Phase 2    Status: Prematurely Ended, Completed
Date: 2009-08-14
An Open Phase II, Two-centre, 1-Arm Safety Study of Once-daily Orally Administered 10 mg ZD4054 in Prior Chemotherapy Treated Patients with Metastatic Hormone-resistant Prostate Cancer
CTID: null
Phase: Phase 2    Status: Prematurely Ended
Date: 2009-07-22
Assessment of the effects of the specific endothelin-A antagonist ZD4054 on prostate cancer biomarkers in patients with castrate-resistant metastatic disease
CTID: null
Phase: Phase 2    Status: Completed
Date: 2009-04-15
A Phase II, Double-blind, Placebo-Controlled, Randomised Study to Assess the Efficacy and Safety of ZD4054 in Combination with Pemetrexed (Alimta®) vs. Pemetrexed Alone in Patients with Non-small Cell Lung Cancer who Have Failed One Prior Platinum-based Chemotherapy Regimen.
CTID: null
Phase: Phase 2    Status: Ongoing, Completed
Date: 2008-09-05
A Phase III, Randomised, Double-blind, Placebo-controlled Study to Assess the Efficacy and Safety of 10 mg ZD4054 in Combination with Docetaxel in Comparison with Docetaxel in Patients with Metastatic Hormone-resistant Prostate Cancer
CTID: null
Phase: Phase 3    Status: Completed, Prematurely Ended
Date: 2008-02-25
A Phase III, Randomised, Placebo-controlled, Double-blind Study to Assess the Efficacy and Safety of Once-daily Orally Administered ZD4054 10 mg in Non-metastatic Hormone-resistant Prostate Cancer Patients
CTID: null
Phase: Phase 3    Status: Prematurely Ended, Completed
Date: 2007-12-07
A Phase III, Randomised, Double-blind Study to Assess the Efficacy and Safety of 10 mg ZD4054 versus Placebo in Patients with Hormone-resistant Prostate Cancer and Bone Metastasis who are Pain Free or Mildly Symptomatic
CTID: null
Phase: Phase 3    Status: Completed, Prematurely Ended
Date: 2007-09-27
A phase II, randomised, double-blind, parallel-group, placebo-controlled, multi-centre study to assess the efficacy and safety of once-daily orally administered ZD4054 15 mg and 10 mg doses in pain-free or mildly symptomatic patients with prostate cancer and bone metastases, who have rising serum prostate specific antigen (PSA) levels despite medical or surgical castration
CTID: null
Phase: Phase 2    Status: Completed
Date: 2004-10-29

Biological Data
  • Administration of ZD4054 (10 and 30 mg) to healthy volunteers inhibits ET-1 induced vasoconstriction. Br J Cancer . 2005 Jun 20;92(12):2148-52.
  • Administration of ZD4054 at doses upto 240 mg has no effect on plasma ET-1 concentrations in healthy volunteers at 4 (A) and 24 h (B) post-dose. Br J Cancer . 2005 Jun 20;92(12):2148-52.
  • Effects of ZD4054 and/or gefitinib on ET-1–induced EGFR, AKT, and p42/44 MAPK activation and cell proliferation in ovarian cancer cells. Cancer Res . 2007 Jul 1;67(13):6351-9.
  • ZD4054 reverts EMT, and restores E-cadherin expression and promoter activity and invasiveness in ovarian cancer cells. Cancer Res . 2007 Jul 1;67(13):6351-9.
  • Effect of ZD4054 in monotherapy and combination therapy with paclitaxel on ovarian carcinoma cell proliferation and on MAPK and AKT signaling pathways. Mol Cancer Ther . 2007 Jul;6(7):2003-11.
  • Induction of apoptosis by treatment with ZD4054 and paclitaxel in ovarian carcinoma cells. Mol Cancer Ther . 2007 Jul;6(7):2003-11.
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