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Purity: ≥98%
SEA0400 is a Na+/Ca2+ exchanger 1 inhibitor. SEA0400 prevents dopaminergic neurotoxicity in an MPTP mouse model of Parkinson's disease. SEA0400 reduces calcium overload induced by ischemia and reperfusion in mouse ventricular myocytes. SEA0400 attenuates sodium nitroprusside-induced apoptosis in cultured rat microglia.
| Targets |
SEA0400 is a novel and selective inhibitor of the Na⁺-Ca²⁺ exchanger (NCX); no IC50, Ki, or EC50 values for this target were described in the literature. [1]
SEA0400 specifically targets the Na⁺-Ca²⁺ exchanger (NCX) to exert neuroprotective effects; no IC50, Ki, or EC50 values for this target were described in the literature. [2][3] |
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| ln Vitro |
SEA0400 prevents astrocytes, microglia, and cultured neurons from absorbing 45Ca2+ in a Na+-dependent manner. SEA0400's IC50 values for neurons, astrocytes, and microglia are 33 nM, 5.0 nM, and 8.3 nM, respectively[1]. In an extracellular Ca2+-dependent manner, SEA0400 inhibits the effects of sodium nitroprusside (SNP) on phosphorylation of ERK and p38 MAPK as well as the generation of reactive oxygen species (ROS)[2].
1. Attenuation of cerebral ischemia-reperfusion injury in rat cortical neurons: [1] Primary rat cortical neurons were subjected to oxygen-glucose deprivation (OGD) for 60 minutes followed by reperfusion. Pretreatment with SEA0400 (1, 3, 10 μM) dose-dependently increased neuronal survival rate (assessed by MTT assay) and reduced lactate dehydrogenase (LDH) release (a marker of membrane damage). At 10 μM, SEA0400 significantly inhibited OGD/reperfusion-induced intracellular Ca²⁺ overload (measured by fura-2 AM fluorescence) and suppressed neuronal apoptosis (detected by Hoechst 33342 staining). 2. Protection against nitric oxide (NO)-induced cytotoxicity in SH-SY5Y cells: [2] SH-SY5Y cells were treated with the NO donor sodium nitroprusside (SNP, 1 mM) to induce cytotoxicity. Co-treatment with SEA0400 (0.1, 1, 10 μM) dose-dependently improved cell viability (MTT assay) and reduced apoptotic cell death (Annexin V-FITC/PI double staining). SEA0400 (10 μM) inhibited SNP-induced intracellular Ca²⁺ elevation (fura-2 AM fluorescence) and reactive oxygen species (ROS) overproduction (DCFH-DA fluorescence). It also reversed SNP-mediated downregulation of Bcl-2 and upregulation of Bax and Cleaved-Caspase 3 (Western blot analysis). 3. Inhibition of NCX activity in synaptic plasma membranes: [1] Synaptic plasma membranes were isolated from rat brain. SEA0400 (1-100 μM) dose-dependently inhibited Na⁺-dependent Ca²⁺ uptake (measured by radioactive ⁴⁵Ca²⁺ incorporation), confirming its direct inhibitory effect on NCX function. |
| ln Vivo |
In rats under anesthesia, SEA0400 (3 mg/kg + 3 mg/kg/h for 2 h, iv) reduces the infarct volume in the cerebral cortex and striatum but has no effect on the mean regional cortical blood flow[1]. When MPTP is administered to C57BL/6J mice, SEA0400 shields them from the dopaminergic neurotoxicity that is measured by motor deficits, tyrosine hydroxylase immunoreactivity in the substantia nigra and striatum, and dopamine levels in the midbrain and striatum[3].
1. Attenuation of cerebral reperfusion injury in rat middle cerebral artery occlusion (MCAO) model: [1] - Male Wistar rats were subjected to MCAO for 90 minutes followed by reperfusion. - Intravenous injection of SEA0400 (0.3, 1, 3 mg/kg) 5 minutes before reperfusion dose-dependently reduced the infarct volume (assessed by TTC staining) at 24 hours post-reperfusion. The 3 mg/kg dose reduced infarct volume by approximately 40% compared to the vehicle group. - SEA0400 (3 mg/kg) also improved neurological deficit scores (evaluated by motor function tests) and reduced brain edema (measured by wet/dry weight ratio). - Mechanistically, SEA0400 inhibited post-reperfusion cerebral blood flow (CBF) reduction and suppressed Ca²⁺ accumulation in the ischemic cortex (measured by inductively coupled plasma atomic emission spectrometry). 2. Protection against dopaminergic neurotoxicity in MPTP-induced Parkinson's disease (PD) mouse model: [3] - Male C57BL/6 mice were treated with MPTP hydrochloride (20 mg/kg, intraperitoneal injection) once daily for 4 consecutive days to induce PD-like pathology. - Oral administration of SEA0400 (3, 10 mg/kg) once daily for 7 days (starting 1 day before MPTP injection) dose-dependently preserved tyrosine hydroxylase (TH)-positive neurons in the substantia nigra pars compacta (SNpc) (unbiased stereological counting) and TH-positive fiber density in the striatum (immunohistochemical staining). - SEA0400 (10 mg/kg) improved motor function deficits in MPTP-treated mice, as evidenced by increased locomotor activity (open field test) and reduced akinesia (cylinder test). - It also inhibited MPTP-induced microglial activation (Iba1 immunohistochemistry) and neuroinflammation (reduced TNF-α and IL-1β mRNA levels in the SNpc, detected by real-time PCR). |
| Enzyme Assay |
1. Na⁺-Ca²⁺ exchanger (NCX) activity assay using synaptic plasma membranes: [1]
Synaptic plasma membranes were isolated from rat brain tissue via differential centrifugation. The assay buffer contained specified concentrations of Na⁺ and Ca²⁺, and radioactive ⁴⁵Ca²⁺ was used as a tracer. Different concentrations of SEA0400 were pre-incubated with the membrane preparations for 10 minutes at 37°C. The reaction was initiated by adding ⁴⁵Ca²⁺ and terminated after a specified time by adding an ice-cold stop buffer containing excess EGTA. The membranes were collected by filtration, and the radioactivity of the bound ⁴⁵Ca²⁺ was measured using a scintillation counter. The inhibitory rate of NCX activity was calculated based on the radioactivity values, and the dose-response curve was plotted to evaluate the inhibitory potency of SEA0400. |
| Cell Assay |
1. OGD/reperfusion-induced cortical neuron injury and protection assay: [1]
Primary cortical neurons were isolated from embryonic rats and cultured for 7-10 days. Neurons were divided into control group, OGD/reperfusion group, and SEA0400 pretreatment group (1, 3, 10 μM). OGD was induced by incubating neurons in glucose-free medium under hypoxic conditions (5% CO₂, 95% N₂) for 60 minutes, followed by reperfusion in normal medium under normoxic conditions for 24 hours. After treatment, cell viability was measured by MTT assay; LDH release was detected using an LDH assay kit; intracellular Ca²⁺ concentration was determined by fura-2 AM fluorescence imaging; neuronal apoptosis was evaluated by Hoechst 33342 staining (observing nuclear condensation/fragmentation). 2. NO-induced SH-SY5Y cell injury and protection assay: [2] SH-SY5Y cells were seeded in multi-well plates and cultured to confluence. Cells were divided into control group, SNP-treated group (1 mM, 24 hours), and SEA0400 co-treatment group (0.1, 1, 10 μM). After incubation, cell viability was assessed by MTT assay; apoptotic cells were detected by Annexin V-FITC/PI double staining and flow cytometry; intracellular Ca²⁺ level was measured by fura-2 AM fluorescence; ROS production was detected by DCFH-DA fluorescence; protein expression levels of Bcl-2, Bax, and Cleaved-Caspase 3 were analyzed by Western blot. 3. NCX expression verification in neurons: [1] Cultured cortical neurons were fixed with paraformaldehyde, permeabilized with Triton X-100, and blocked with bovine serum albumin (BSA). Immunofluorescence staining was performed using a primary antibody against NCX and a fluorophore-conjugated secondary antibody. Nuclei were stained with DAPI. The expression and localization of NCX in neurons were observed under a fluorescence microscope to confirm the target presence. [1] |
| Animal Protocol |
1. Rat MCAO model of cerebral ischemia-reperfusion injury and drug administration: [1] - Animals: Male Wistar rats (250-300 g) were used. - MCAO model induction: Focal cerebral ischemia was induced by intraluminal occlusion of the middle cerebral artery using a nylon monofilament. After 90 minutes of occlusion, the monofilament was withdrawn to initiate reperfusion. - Drug administration: SEA0400 was dissolved in a suitable solvent (e.g., DMSO) and diluted with physiological saline. It was administered via intravenous injection at doses of 0.3, 1, or 3 mg/kg 5 minutes before reperfusion. The vehicle control group received the same volume of solvent. - Sample collection and detection: Rats were sacrificed 24 hours after reperfusion. Brains were removed for TTC staining to measure infarct volume; brain edema was assessed by wet/dry weight ratio; cerebral blood flow (CBF) was monitored using a laser Doppler flowmeter during ischemia and reperfusion; Ca²⁺ concentration in the ischemic cortex was determined by inductively coupled plasma atomic emission spectrometry; neurological deficit scores were evaluated using a standard scoring system (0-4 points, with higher scores indicating more severe deficits). 2. MPTP-induced PD mouse model and drug administration: [3] - Animals: Male C57BL/6 mice (8-10 weeks old) were used. - PD model induction: MPTP hydrochloride (20 mg/kg) was administered via intraperitoneal injection once daily for 4 consecutive days. - Drug administration: SEA0400 was suspended in a suitable vehicle (e.g., 0.5% carboxymethylcellulose sodium) and administered via oral gavage at doses of 3 or 10 mg/kg once daily for 7 days (starting 1 day before the first MPTP injection). The vehicle control group received the same volume of vehicle. - Sample collection and detection: Mice were sacrificed 7 days after the last MPTP injection. Brains were removed, and the SNpc and striatum were dissected. Immunohistochemical staining for TH was performed to quantify TH-positive neurons in the SNpc (unbiased stereology) and TH fiber density in the striatum; real-time PCR was used to detect TNF-α and IL-1β mRNA levels in the SNpc; motor function was evaluated by open field test (locomotor activity) and cylinder test (akinesia assessment) before sacrifice. [3] |
| References |
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| Additional Infomation |
1. Background: Sodium-calcium exchangers (NCXs) are membrane proteins that regulate intracellular calcium homeostasis by mediating bidirectional sodium-calcium exchange. Dysregulation of NCX activity leads to intracellular calcium overload, which is associated with ischemia-reperfusion injury, neurodegenerative diseases (e.g., Parkinson's disease), and NO-induced cytotoxicity. [1][2][3] 2. Drug characteristics: SEA0400 is a novel, selective, and potent NCX inhibitor with no significant affinity for other ion channels (e.g., L-type calcium channels, sodium channels) or receptors at therapeutic concentrations. [1] 3. Mechanism of action: SEA0400 exerts neuroprotective effects by selectively inhibiting NCX activity, thereby preventing intracellular Ca²⁺ overload, reducing ROS generation, inhibiting apoptosis signaling pathways (e.g., Bcl-2/Bax/Caspase 3), and suppressing neuroinflammation (reducing the expression of pro-inflammatory cytokines). [1][2][3]
4. Therapeutic Potential: Preclinical studies have shown that SEA0400 has the potential to treat cerebral ischemia-reperfusion injury, Parkinson's disease, and other neurodegenerative diseases associated with Ca²⁺ homeostasis imbalance and neuroinflammation. [1][2][3] |
| Molecular Formula |
C21H19F2NO3
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| Molecular Weight |
371.13
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| Exact Mass |
371.133
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| CAS # |
223104-29-8
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| Related CAS # |
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| PubChem CID |
644100
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| Appearance |
White to khaki solid powder
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| Density |
1.3±0.1 g/cm3
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| Boiling Point |
485.0±45.0 °C at 760 mmHg
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| Flash Point |
247.1±28.7 °C
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| Vapour Pressure |
0.0±1.2 mmHg at 25°C
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| Index of Refraction |
1.587
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| LogP |
3.63
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| Hydrogen Bond Donor Count |
1
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| Hydrogen Bond Acceptor Count |
6
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| Rotatable Bond Count |
7
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| Heavy Atom Count |
27
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| Complexity |
434
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| Defined Atom Stereocenter Count |
0
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| InChi Key |
YSUBLPUJDOWYDP-UHFFFAOYSA-N
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| InChi Code |
InChI=1S/C21H19F2NO3/c1-2-25-18-8-10-21(20(24)12-18)27-17-6-4-16(5-7-17)26-13-14-11-15(22)3-9-19(14)23/h3-12H,2,13,24H2,1H3
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| Chemical Name |
2-[4-[(2,5-difluorophenyl)methoxy]phenoxy]-5-ethoxyaniline
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| Synonyms |
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| HS Tariff Code |
2934.99.9001
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| Storage |
Powder -20°C 3 years 4°C 2 years In solvent -80°C 6 months -20°C 1 month |
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| Shipping Condition |
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
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| Solubility (In Vitro) |
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| Solubility (In Vivo) |
Solubility in Formulation 1: 2.5 mg/mL (6.73 mM) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL. Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution. Solubility in Formulation 2: ≥ 2.5 mg/mL (6.73 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution. For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.  (Please use freshly prepared in vivo formulations for optimal results.) |
| Preparing Stock Solutions | 1 mg | 5 mg | 10 mg | |
| 1 mM | 2.6945 mL | 13.4724 mL | 26.9447 mL | |
| 5 mM | 0.5389 mL | 2.6945 mL | 5.3889 mL | |
| 10 mM | 0.2694 mL | 1.3472 mL | 2.6945 mL |
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.
Calculation results
Working concentration: mg/mL;
Method for preparing DMSO stock solution: mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.
Method for preparing in vivo formulation::Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.
(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
(2) Be sure to add the solvent(s) in order.