SD-06

Alias: SD-06; SD-06; SD-06
Cat No.:V3013 Purity: ≥98%
SD-06 is an inhibitor of p38 alpha MAP kinase which inhibits p38α with an IC50 value of 170 nM and inhibits LPS-stimulated TNF-release in rats with 83% inhibition at an oral dose of 1mg/kg.
SD-06 Chemical Structure CAS No.: 271576-80-8
Product category: p38 MAPK
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

SD-06 is an inhibitor of p38 alpha MAP kinase which inhibits p38α with an IC50 value of 170 nM and inhibits LPS-stimulated TNF-release in rats with 83% inhibition at an oral dose of 1mg/kg. It could be applied to the treatment of arthritis.

Biological Activity I Assay Protocols (From Reference)
Targets
p38 MAPK (IC50 = 110 nM)
ln Vitro
SD0006 is selective for p38α kinase over 50 other kinases screened (including p38γ and p38δ with modest selectivity over p38β). In cellular studies, it reduces the release of inflammatory mediators. Multiple proinflammatory proteins are expressed less frequently when SD0006 is present, both at the transcriptional and translational levels. While SD0006 has no direct COX-1 or COX-2 inhibitory activity in RASFs, it was able to completely inhibit the release of IL-1β-stimulated PGE2 with an IC50 of 96.2 nmol/l[1].
ln Vivo
In animal models of chronic inflammation and disease, SD0006 is successful in vivo. It has significant protective effects on bone density and paw joint integrity in the rat streptococcal-cell-wall induced arthritis model, demonstrating its efficacy. Additionally, SD0006 exhibits good oral anti-inflammatory efficacy and excellent interspecies agreement in rats, cynomolgus monkeys, and humans. In a rodent model of acute inflammation, it reduces pain and swelling[1].
Animal Protocol
8- to 12-week-old DBA/1 mice
3.75, 7.5 and 15 mg/kg.
Orally twice daily.
References

[1]. Pharmacology . 2009;84(1):42-60.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C20H20CLN5O2
Molecular Weight
397.86
Exact Mass
397.1306
Elemental Analysis
C, 60.38; H, 5.07; Cl, 8.91; N, 17.60; O, 8.04
CAS #
271576-80-8
Related CAS #
271576-80-8;
Appearance
Solid powder
SMILES
C1CN(CCC1C2=C(C(=NN2)C3=CC=C(C=C3)Cl)C4=NC=NC=C4)C(=O)CO
InChi Key
CATQHDWESBRRQA-UHFFFAOYSA-N
InChi Code
InChI=1S/C20H20ClN5O2/c21-15-3-1-13(2-4-15)19-18(16-5-8-22-12-23-16)20(25-24-19)14-6-9-26(10-7-14)17(28)11-27/h1-5,8,12,14,27H,6-7,9-11H2,(H,24,25)
Chemical Name
1-[4-[3-(4-chlorophenyl)-4-pyrimidin-4-yl-1H-pyrazol-5-yl]piperidin-1-yl]-2-hydroxyethanone
Synonyms
SD-06; SD-06; SD-06
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ~80 mg/mL ( ~201.1 mM)
Water: <2 mg/mL
Ethanol: Insoluble
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (6.28 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (6.28 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (6.28 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.5134 mL 12.5672 mL 25.1345 mL
5 mM 0.5027 mL 2.5134 mL 5.0269 mL
10 mM 0.2513 mL 1.2567 mL 2.5134 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • Structures of 4 DAPs, including SD0006 and the parent compound SC74102, and SC75422 used to create 'surrogate native‘ crystals. Pharmacology . 2009;84(1):42-60.
  • Crystal structure of p38α/inhibitor complex. Shown is SC79659 (gold, with nitrogen indicated in blue) which differs from SD0006 only by substitution of the pyridine ring with a pyrimidine and gives the same binding conformation. Pharmacology . 2009;84(1):42-60.
  • Ex vivo equivalence of inhibition by SD0006 of inflammatory cytokine release in LPS-challenged U937 cells. Pharmacology . 2009;84(1):42-60.
  • Concentration-dependent inhibition of COX-2 protein expression and PGE2 release by SD0006 in a human RASF cell line in response to IL-1β. Pharmacology . 2009;84(1):42-60.
  • Inhibition by SD0006 in RASFs of p38 kinase activation and activity, but not of ERK or JNK. Pharmacology . 2009;84(1):42-60.
  • In the carrageenan rat paw model, SD0006 reduces pain and swelling prophylactically (a) and therapeutically reduces pain with efficacy equal to steroids (b). a, b The data represent the means ± SEM based on 5 rats per group. Pharmacology . 2009;84(1):42-60.
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