SBE 13 HCl

Alias: SBE13 HCl; SBE 13; SBE13; SBE-13 HCl
Cat No.:V1581 Purity: ≥98%
SBE 13 HCl (SBE13; SBE-13), the hydrochloride salt of SBE13, is a novel, potent and selective Polo-like Kinase 1 (PLK1) inhibitor with potential antineoplastic activity.
SBE 13 HCl Chemical Structure CAS No.: 1052532-15-6
Product category: PLK
This product is for research use only, not for human use. We do not sell to patients.
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Other Forms of SBE 13 HCl:

  • SBE13
Official Supplier of:
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

SBE 13 HCl (SBE13; SBE-13), the hydrochloride salt of SBE13, is a novel, potent and selective Polo-like Kinase 1 (PLK1) inhibitor with potential antineoplastic activity. It exhibits >4000-fold selectivity over Aurora A kinase, Plk2, and Plk3, and inhibits PLK1 with an IC50 of 200 pM. SBE 13 induces a G2/M arrest and apoptosis in a number of cancer cell lines, while also decreasing cell proliferation. SBE 13 does not affect the cell cycle or the primary cells' ability to proliferate. When SBE13 and Enzastaurin are combined, HCT116(p53-/-) cells exhibit a synergistic decrease in cell proliferation and an increased induction of apoptosis.

Biological Activity I Assay Protocols (From Reference)
Targets
PLK1 (IC50 = 200 pM); PLK3 (IC50 = 875 nM)
ln Vitro

SBE13, with an EC50 of 18 μM, markedly inhibits cell proliferation and induces apoptosis in HeLa cells[1]. On Caspase 3/7 activity in NIH-3T3 cells, SBE13 (1-100 μM) has no effect. The morphology of primary cells treated with SBE13 (66 and 100 μM) remains unchanged. G0/G1 arrest is indicated by SBE13 (10 and 100 μM) decreasing pRb staining in primary cells[2]. Phosphohistone H3, Wee1, Emi1, securin, and cyclin B1 are all upregulated in HeLa cells by SBE13 (66 and 100 μM), which also causes Cdc27 to snap. SBE13 (10 and 100 μM) also causes HeLa cells to undergo apoptosis[3].

ln Vivo

Enzyme Assay
After a 13-hour release in the presence of SBE13, cells are lysed, double thymidine block is applied, and kinase is immunoprecipitated from lysates using antibodies in order to measure Plk1 kinase activity. To summarize, 800 μg of total protein are immunoprecipitated and then incubated for 2 hours at 4°C on a rotator with 1.5 μg of Plk1 antibody cocktail. Protein A/G Agarose beads are used in the immunoprecipitated protein collection process. Plk1 immunoprecipitates are incubated for 30 minutes at 37°C in kinase buffer with casein (1 μg) and [γ-32P]ATP (1 μCi). Kinase assay products are fractionated on 10% bis-tris-polyacrylamide gels, and after a 12- to 36-hour exposure, phosphorylated substrate is seen by autoradiography. Western blot analysis is performed on equal volumes of immunoprecipitates to verify that Plk1 protein is loaded equally in kinase reactions[1].
Cell Assay
SBE13 is applied to the cells a day after subculturing. Normal culture medium is used to culture the control cells. SBE13 concentrations varied from 1 nM to 100 µM. One can calculate the growth rate of 1 x 105 cells per 6-well by counting the cells 24 hours, 48 hours, and 72 hours after treatment. Every time point is studied in triplicate using cell culture.
Animal Protocol


References

[1]. Identification and validation of a potent type II inhibitor of inactive polo-like kinase 1. ChemMedChem. 2009 Nov;4(11):1806-9.

[2]. Fate of primary cells at the G?/S boundary after polo-like kinase 1 inhibition by SBE13. Cell Cycle. 2011 Feb 15;10(4):708-20. Epub 2011 Feb 15.

[3]. Biological impact of freezing Plk1 in its inactive conformation in cancer cells. Cell Cycle. 2010 Feb 15;9(4):761-73. Epub 2010 Feb 16.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C24H28CL2N2O4
Molecular Weight
479.4
Exact Mass
478.1426128
Elemental Analysis
C, 60.13; H, 5.89; Cl, 14.79; N, 5.84; O, 13.35
CAS #
1052532-15-6
Related CAS #
SBE13;775294-82-1
Appearance
white solid powder
SMILES
COC1=C(C=C(C=C1)CCNCC2=CC(=C(C=C2)OCC3=CN=C(C=C3)Cl)OC)OC.Cl
InChi Key
QBGSVDJLQQXEGG-UHFFFAOYSA-N
InChi Code
InChI=1S/C24H27ClN2O4.ClH/c1-28-20-7-4-17(12-22(20)29-2)10-11-26-14-18-5-8-21(23(13-18)30-3)31-16-19-6-9-24(25)27-15-19;/h4-9,12-13,15,26H,10-11,14,16H2,1-3H3;1H
Chemical Name
N-[[4-[(6-chloropyridin-3-yl)methoxy]-3-methoxyphenyl]methyl]-2-(3,4-dimethoxyphenyl)ethanamine;hydrochloride
Synonyms
SBE13 HCl; SBE 13; SBE13; SBE-13 HCl
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ~95 mg/mL (~198.2 mM)
Water: <1 mg/mL
Ethanol: <1 mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (5.21 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (5.21 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (5.21 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.0859 mL 10.4297 mL 20.8594 mL
5 mM 0.4172 mL 2.0859 mL 4.1719 mL
10 mM 0.2086 mL 1.0430 mL 2.0859 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • SBE 13 HCl

    Western Blot analyses of pGSK3β protein levels in HeLa and MCF-7 cells after treatment with Enzastaurin and SBE13. Oncotarget. 2014 Apr 30;5(8):2263-75.
  • SBE 13 HCl

    Cell proliferation of HCT116p53wt and HCT116p53-/- cells 24-72 hours after treatment with Enzastaurin and SBE13. Oncotarget. 2014 Apr 30;5(8):2263-75.
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