PROTAC B-Raf degrader 1

Cat No.:V37545 Purity: ≥98%
PROTAC B-Raf degrader 1 (compound 2) is a B-Raf PROTAC based on Cereblon ligand.
PROTAC B-Raf degrader 1 Chemical Structure Product category: PROTACs
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
PROTAC B-Raf degrader 1 (compound 2) is a B-Raf PROTAC based on Cereblon ligand. Has anti-tumor activity.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
PROTAC B-Raf degrader 1 (compound 2) had IC50 values of 2.7 μM, 21.21 μM, 18.70 μM, 41.11 μM, and 22.68 μM against MCF-7, MDA-MB-231, HepG2, LO2, and B16 cells, respectively [1]. By enlisting the ubiquitin-proteasome system, PROTAC B-Raf degrader 1 (5 or 10 μM) can hasten B-Raf degradation and consequently impact the expression of B-Raf downstream protein Mcl-1 [1]. Following a 24-hour incubation period with a 20 μM concentration of PROTAC B-Raf degrader 1, the MCF-7 cells exhibited an apoptotic rate of 76.70% (early apoptosis 64.00%, late apoptosis 12.70%) [1]. The cell cycle is stopped in the G2/M phase by PROTAC B-Raf degrader 1 [1].
Cell Assay
Cell Cytotoxicity Assay[1]
Cell Types: Human MCF-7 breast cancer cell line, MDA-MB-231 breast cancer cells, human HepG2 hepatoma cells, human normal LO2 liver cells, B16 cells.
Tested Concentrations: 0-200 μM.
Incubation Duration: 72 hrs (hours).
Experimental Results: The IC50 values are 2.7 μM, 21.21 μM, 18.70 μM, 41.11μM and 22.68 μM in MCF-7, MDA-MB-231, HepG2, LO2 and B16 cells, respectively.

Western Blot Analysis[1]
Cell Types: Human MCF-7 breast cancer cell line.
Tested Concentrations: 5 or 10 μM.
Incubation Duration: 24 hrs (hours).
Experimental Results: Effectively induced the degradation of B-Raf and impacted the expression of Mcl-1.

Apoptosis Analysis[1]
Cell Types: Human MCF-7 breast cancer cell line.
Tested Concentrations: 2.7-20 μM.
Incubation Duration: 24 hrs (hours).
Experimental Results: Achieved an apoptosis rate of 76.70% (64.00% early apoptosis, 12.70% late apoptosis) after 24 h incubation with the concentration of 20 μM.

Cell Cycle Analysis[1]
Cell Types: Human MCF-7 breast cancer cell line.
Tested Concentrations: 20 μM.
Incubation Duration: 24 hrs (hours).
Experimental Results: 1.94% cells were
References
[1]. Chen H, et al. Pomalidomide hybrids act as proteolysis targeting chimeras: Synthesis, anticancer activity and B-Raf degradation. Bioorg Chem. 2019 Mar 19;87:191-199.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (3.27 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (3.27 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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