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ML-SI1

Cat No.:V76760 Purity: ≥98%
ML-SI1, a racemic mixture (racemate) of diastereoisomers, is a TRPML inhibitor (antagonist) with IC50 of 15 μM for TRPML1.
ML-SI1
ML-SI1 Chemical Structure Product category: TRP Channel
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
Other Sizes
Official Supplier of:
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Product Description
ML-SI1, a racemic mixture (racemate) of diastereoisomers, is a TRPML inhibitor (antagonist) with IC50 of 15 μM for TRPML1.
ML-SI1 is a racemic mixture of cis- and trans-isomers (55:45) and functions as a potent and selective inhibitor of the transient receptor potential mucolipin 1 (TRPML1) cation channel. It is a valuable research tool for studying the physiological roles of TRPML1.
Biological Activity I Assay Protocols (From Reference)
Targets
IC50: 15 μM (TRPML1)[1]
ML-SI1 targets the transient receptor potential mucolipin subfamily member 1 (TRPML1), a non-selective cation channel primarily localized to the membranes of late endosomes and lysosomes. It is a selective antagonist that shows a weak effect on the related TRPML2 channel, making it a specific tool for studying TRPML1 functions.
ln Vitro
ML-SI1 is an indivisible racemic mixture of cis- and trans-isomers (55:45) in a brief synthetic sequence that, when activated with ML-SA1, exhibits inhibitory activity on hTRPML1 (and a negligible effect on TRPML2). Experiments using Fura-2 for single cell calcium imaging verified that the synthetic racemic ML-SI1 (10 μM) inhibits hTRPML1[1].
ML-SI1 inhibits the TRPML1 channel with an IC₅0 value of 15 microM. It acts as an antagonist, blocking the channel activated by the known agonist ML-SA1. This inhibition has been confirmed using single-cell calcium imaging experiments with Fura-2 dye. It has an IC50 of 15 microM for TRPML1.
ln Vivo
Specific in vivo activity data for ML-SI1 is not available in the standard literature. As a research antagonist, its in vivo effect would typically be evaluated in animal models of diseases where lysosomal dysfunction is suspected, such as certain neurodegenerative disorders. Specific in vivo efficacy results are not reported.
Enzyme Assay
Standard biochemical protocols for assessing TRPML1 activity involve whole-cell patch-clamp electrophysiology to directly measure the ion current flowing through the channel in the presence or absence of an inhibitor. Alternatively, fluorescent-based assays using the calcium-sensitive dye Fura-2 can be used to measure agonist-induced calcium influx in cells overexpressing the channel.
Cell Assay
Typical cellular protocols for assessing the inhibitory activity of compounds like ML-SI1 involve loading cells (e.g., HEK293 cells overexpressing human TRPML1) with a calcium indicator dye such as Fura-2 or Fluo-4. Cells are pre-treated with ML-SI1 at various concentrations, and then the TRPML1-specific agonist ML-SA1 is added. The resulting change in intracellular calcium concentration is measured using a fluorescence plate reader or a fluorescence microscope.
Animal Protocol
Standard procedures for testing TRPML1 antagonists in vivo involve administering the compound (e.g., by intraperitoneal injection) to disease model mice, such as those modeling lysosomal storage disorders or neurodegenerative diseases. After treatment, tissues are collected to assess lysosomal morphology and function by electron microscopy or Western blot for biomarkers of lysosomal stress.
ADME/Pharmacokinetics
ML-SI1 is a small molecule with a molecular weight of 449.37. For in vitro use, it is soluble in DMSO (typically used for stock solutions). For in vivo application, it can be formulated using co-solvents like a 10% DMSO, 40% PEG300, 5% Tween 80, and 45% saline mixture.
Toxicity/Toxicokinetics
No specific toxicological data for ML-SI1 is available in standard literature. As a TRPML1 antagonist, its toxicity profile is expected to be related to the disruption of normal lysosomal functions. However, for a research compound, typical cell viability assays (e.g., MTT) would be required to determine its safety margin, but such data are not standardly published for this reagent.
References

[1]. Chemical and pharmacological characterization of the TRPML calcium channel blockers ML-SI1 and ML-SI3. Eur J Med Chem. 2021 Jan 15;210:112966.

Additional Infomation
ML-SI1 is a research-grade chemical probe used to elucidate the roles of TRPML1 in cellular processes such as lysosomal biogenesis, autophagy, membrane trafficking, and metal ion homeostasis. It is strictly for laboratory research use and is not intended for diagnostic or therapeutic purposes. It has not been approved by the FDA or any other regulatory agency for human use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C23H26CL2N2O3
Molecular Weight
449.37
Appearance
Off-white to yellow solid powder
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO :~100 mg/mL (~222.53 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (5.56 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (5.56 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (5.56 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.2253 mL 11.1267 mL 22.2534 mL
5 mM 0.4451 mL 2.2253 mL 4.4507 mL
10 mM 0.2225 mL 1.1127 mL 2.2253 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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