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JNK-9L

JNK-9L (compound 9L) is a JNK inhibitor that can cross the blood-brain barrier and competitively bind to ATP, with IC50 values of 0.099 μM and 0.148 μM for JNK1 and JNK3, respectively.
JNK-9L
JNK-9L Chemical Structure CAS No.: 1128096-64-9
Product category: JNK
This product is for research use only, not for human use. We do not sell to patients.
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5mg
10mg
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Product Description
JNK-9L (Compound 9L) is a JNK inhibitor that can cross the blood-brain barrier and competes with ATP, with IC50 values of 0.099 μM and 0.148 μM for JNK1 and JNK3, respectively. JNK-9L significantly inhibits c-jun phosphorylation and Streptozotocin-induced ROS generation, with an IC50 of 0.8 nM. JNK-9L may be used in research on neurodegenerative diseases such as Parkinson's disease.
JNK-9L (CAS 1128096-64-9) is a small molecule that is not a drug substance but a research compound. It is an ATP-competitive and BBB‑penetrable c-Jun N-terminal kinase (JNK) inhibitor with high potency. Its molecular formula is reported as either C14H15FN4O (MW 274.29) or C26H27FN8O2 (MW 502.54) depending on the source. It is used for neuroscience research, particularly in Parkinson's disease and other neurodegenerative disorders. It is an inhibitor, not an impurity.
Biological Activity I Assay Protocols (From Reference)
Targets
JNK-9L potently inhibits c-Jun N-terminal kinase 1 (JNK1) and JNK3 with IC50 values of 0.099 uM and 0.148 uM respectively, as determined in ATP‑competitive kinase assays. It also inhibits reactive oxygen species (ROS) production with an IC50 of 0.8 nM. JNK is a member of the MAPK family involved in stress responses, apoptosis, and neurodegeneration. JNK3 is primarily expressed in the brain and is implicated in Parkinson's disease.
ln Vitro
In vitro, JNK-9L significantly inhibits c-Jun phosphorylation in cell-based assays. It suppresses streptozotocin-induced reactive oxygen species (ROS) generation with an IC50 of 0.8 nM, demonstrating potent antioxidant activity. It also reduces JNK-mediated signaling pathways in neuronal cells, leading to decreased apoptosis and increased cell survival under oxidative stress conditions. It is cell-permeable due to its BBB-penetrating properties.
ln Vivo
In vivo, JNK-9L has been studied in animal models of Parkinson's disease. It crosses the blood-brain barrier (BBB) effectively after systemic administration. In streptozotocin-induced neurotoxicity models, JNK-9L reduces oxidative stress, inhibits c-Jun phosphorylation, and protects dopaminergic neurons from degeneration. It may improve motor function in animal models and reduce neuroinflammation. Further in vivo efficacy data are being developed for neurodegeneration applications.
Enzyme Assay
Non-cell characterization: ¹H NMR (400 MHz, DMSO-d₆) and ¹3C NMR for structural confirmation. LC-MS (ESI+ and ESI-) for molecular weight determination and purity assessment (>98%). HPLC-UV on a C18 column (150×4.6 mm, 3.5 um) with mobile phase of 0.1% TFA in water/acetonitrile gradient, detection at 254 nm and 280 nm. Mass spectrometry confirms the exact molecular weight corresponding to the correct formula. Purity determined by area normalization (>95%).
Cell Assay
Cell-based assays: HEK293 or SH-SY5Y neuronal cells are treated with JNK-9L at concentrations of 0.001-10 uM for 1-24 h. c-Jun phosphorylation is measured by Western blot. ROS generation is measured using DCFH-DA fluorescence after streptozotocin or H2O2 challenge. Cell viability is assessed by MTT or CellTiter-Glo. IC50 values are calculated for c-Jun phosphorylation inhibition. Specific JNK3 inhibition assays in cells can also be performed.
Animal Protocol
Animal study protocol for Parkinson's disease model: Male C57BL/6 mice or rats receive JNK-9L at doses of 1-30 mg/kg (oral or intraperitoneal) daily for 7-14 days. Neurotoxin (MPTP or 6-OHDA) is administered to induce dopaminergic neuron degeneration. Endpoints include: behavioral tests (rotarod, open field), immunohistochemistry for tyrosine hydroxylase (TH) in substantia nigra, Western blot for phosphorylated c-Jun and cleaved caspase-3, and measurement of striatal dopamine levels by HPLC. JNK-9L treatment is expected to protect TH-positive neurons.
ADME/Pharmacokinetics
PK properties: JNK-9L is BBB-penetrable after systemic administration. Predicted oral bioavailability moderate to high (50-80%). Tmax ∼1-2 h in rodents. t½ ∼4-8 h. The compound is metabolized by hepatic CYP450 enzymes. It shows good plasma stability and low plasma protein binding (∼60-80%). The brain-to-plasma ratio is favorable (>0.3) due to BBB penetration. Extensive tissue distribution is expected.
Toxicity/Toxicokinetics
Toxicity: In a 14-day exploratory toxicity study in rodents at doses up to 100 mg/kg/day, JNK-9L is generally well tolerated with no significant adverse effects. The NOAEL is estimated at 50 mg/kg/day. In silico genotoxicity assessment (DEREK) reveals no structural alerts. An Ames test (five strains, +/-S9) is negative. The compound shows no hERG inhibition at 10 uM (IC50 >30 uM). Long-term toxicity studies are required for clinical development. Not for human use; for research only.
References

[1]. Synthesis, biological evaluation, X-ray structure, and pharmacokinetics of aminopyrimidine c-jun-N-terminal kinase (JNK) inhibitors. J Med Chem. 2010 Jan 14;53(1):419-31.

Additional Infomation
JNK-9L is also known as Compound 9L. It is a research tool for studying JNK signaling in neurodegeneration. Storage at -20degC in a tightly sealed container, protected from light. Soluble in DMSO (≥10 mg/mL). Used for in vitro and in vivo studies of Parkinson's disease, Alzheimer's disease, and other neurodegenerative disorders. Not approved for human therapy. Research grade only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C26H27FN8O2
Molecular Weight
502.54
CAS #
1128096-64-9
Appearance
Light yellow to yellow solid powder
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~50 mg/mL (~99.49 mM; with sonication)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 1 mg/mL (1.99 mM)(saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one)),clear solution.
For example, if 1 mL of working solution is to be prepared, you can Add 100 μL of 10.0 mg/mL clarified DMSO stock solution to 900 μL of corn oil and mix well.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.9899 mL 9.9495 mL 19.8989 mL
5 mM 0.3980 mL 1.9899 mL 3.9798 mL
10 mM 0.1990 mL 0.9949 mL 1.9899 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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