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6:2 Cl-PFAES

Cat No.:V107193 Purity: ≥98%
6:2 Cl-PFAES is reproductively toxic.
6:2 Cl-PFAES
6:2 Cl-PFAES Chemical Structure CAS No.: 73606-19-6
Product category: ERR
This product is for research use only, not for human use. We do not sell to patients.
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10mg
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Product Description
6:2 Cl-PFAES is reproductively toxic. 6:2 Cl-PFAES can cause elevated serum estradiol and vitellogenin levels in adult males and impair embryonic development in offspring.
6:2 Cl-PFAES (CAS: 73606-19-6), also known as 6:2 chlorinated polyfluoroalkyl ether sulfonate, is an environmental contaminant and a member of the per- and polyfluoroalkyl substances (PFAS) family. It is a persistent organic pollutant found in the environment. In research, it is used as an analytical reference standard to study the toxicology and environmental fate of PFAS compounds. It is a colorless to off-white solid powder. This compound is known to be reproductively toxic and is classified as an endocrine disruptor.
Biological Activity I Assay Protocols (From Reference)
Targets
6:2 Cl-PFAES does not have a classical drug target but acts as an endocrine-disrupting chemical (EDC). It targets the endocrine system, specifically interfering with estrogen signaling pathways. It is known to cause elevated serum estradiol levels in adult males. Estradiol is the primary female sex hormone, and its elevation in males disrupts the normal hormonal balance. By increasing estradiol levels, it also induces the production of vitellogenin (VTG), a protein typically produced by females in response to estrogen. The mechanism involves the activation of estrogen receptors (ERalpha and ERbeta). It may also interfere with other hormone axes, such as thyroid function.
ln Vitro
In vitro studies have demonstrated that 6:2 Cl-PFAES is an active endocrine disruptor. It is used in bioassays to study estrogen receptor (ER) activation. In cell-based reporter assays (e.g., using T47D-KBluc cells engineered with an estrogen response element (ERE) luciferase reporter), 6:2 Cl-PFAES induces a dose-dependent increase in luciferase activity. This indicates that it acts as an estrogen agonist, mimicking the effect of natural estrogen (17beta-estradiol). The exact EC50 values vary depending on the assay conditions and cell line, but the compound is considered a potent ER agonist. It also exhibits cytotoxicity at higher concentrations, though the main research focus is its sub-lethal endocrine effects. It has been shown to impair embryonic development in offspring.
ln Vivo
6:2 Cl-PFAES has significant in vivo reproductive toxicity. In adult male animal models (e.g., zebrafish or rodents), exposure to the compound leads to a significant increase in serum estradiol (E2) levels and elevated production of vitellogenin (VTG), a biomarker of estrogen exposure. Furthermore, exposure to 6:2 Cl-PFAES impairs embryonic development in offspring, leading to reduced survival, hatching rates, and morphological abnormalities. These effects are consistent with the compound's mechanism as an environmental estrogen. The in vivo activity is the basis for its classification as a hazardous substance. It causes elevated estradiol and vitellogenin levels in adult males and impairs embryonic development. It is reproductively toxic.
Enzyme Assay
Non-cellular assays for 6:2 Cl-PFAES are typically analytical chemistry protocols for environmental detection. A standard protocol uses Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS). Water, soil, or biological samples are extracted using solid-phase extraction (SPE). The extract is injected into an LC system equipped with a C18 column. The mobile phase consists of a gradient of water and methanol, often with ammonium acetate as an additive. Detection is performed in negative electrospray ionization (ESI-) mode, monitoring specific multiple reaction monitoring (MRM) transitions (e.g., m/z 532.9 -> 168.9 for the parent ion). This method is used to quantify parts per trillion (ppt) levels of the compound in environmental samples. The standard is essential for method validation and quantification.
Cell Assay
Cellular assays for 6:2 Cl-PFAES utilize reporter cell lines to measure estrogenic activity. A standard protocol uses the T47D-KBluc human breast cancer cell line, which contains an estrogen-responsive luciferase reporter gene. Cells are seeded in 96-well white plates in estrogen-free medium (phenol red-free with charcoal-stripped FBS). They are then treated with serial dilutions of 6:2 Cl-PFAES (e.g., 0.1 nM to 10 uM) for 24 hours. At the end of the treatment, a luciferase substrate is added, and the luminescence is measured using a luminometer. The fold change in luminescence compared to the vehicle control is calculated. The EC50 is derived from the concentration-response curve. A positive control (e.g., 1 nM 17beta-estradiol) is included to confirm assay performance. This assay directly measures the activation of the estrogen receptor signaling pathway by the compound.
Animal Protocol
In vivo studies to assess the endocrine-disrupting effects of 6:2 Cl-PFAES are often conducted in zebrafish (Danio rerio). A standard protocol uses adult zebrafish (3-4 months old). The fish are housed in a flow-through system. 6:2 Cl-PFAES is dissolved in water (or DMSO as a carrier) and added to the tank water at nominal concentrations of 0.1, 1, 10, and 100 ug/L for an exposure period of 21-28 days. At the end of exposure, male fish are euthanized, and blood plasma is collected. Plasma levels of estradiol (E2) and vitellogenin (VTG) are measured by ELISA. For developmental toxicity, fertilized zebrafish embryos are exposed to the same concentrations until 96-120 hours post-fertilization (hpf). Endpoints include hatching rate, survival rate, heart rate, and morphological abnormalities (e.g., edema, spinal curvature). A significant increase in E2/VTG and an increase in malformations confirm the reproductively toxic and developmental effects of the compound.
ADME/Pharmacokinetics
6:2 Cl-PFAES has a molecular weight of 570.67 g/mol and a molecular formula of C8ClF16KO4S. It is a solid powder with a high lipophilicity (LogP = 5.78). It has low water solubility but is soluble in organic solvents like DMSO, methanol, and acetonitrile. The compound is extremely persistent in the environment and in biological systems due to the strong carbon-fluorine bonds. Its metabolism is slow. In biological tissues, it bioaccumulates, with a long elimination half-life (estimated to be months to years in humans). In research settings, stock solutions are prepared in DMSO and stored at -20degC or -80degC. The compound is stable under these conditions for long periods (years). Its distribution in the body is to the liver, kidneys, and reproductive organs, which correlates with its toxic effects. It is also known as 9-Chlorohexadecafluoro-3-oxanonane-1-sulfonate (potassium salt).
Toxicity/Toxicokinetics
6:2 Cl-PFAES is classified as a hazardous substance due to its reproductive toxicity and endocrine-disrupting properties. Exposure is known to cause elevated serum estradiol and vitellogenin levels in adult males and impairs embryonic development in offspring. It is potentially carcinogenic (as are many PFAS compounds). It is also toxic to aquatic life. The compound is not a drug and has no medical use. It is strictly a reference standard for environmental monitoring and forensic analysis. Handling requires extreme care: it should be used in a well-ventilated fume hood with full PPE (lab coat, nitrile gloves, safety goggles). Inhalation and skin contact should be avoided. Contaminated laboratory waste must be disposed of as hazardous material. Some PFAS compounds are regulated under the Stockholm Convention on Persistent Organic Pollutants. It is for research use only, not for human or veterinary use. It is not a clinical therapeutic. The product is supplied by chemical companies for analytical purposes.
References

[1]. Two-generational reproductive toxicity assessment of 6:2 chlorinated polyfluorinated ether sulfonate (F-53B, a novel alternative to perfluorooctane sulfonate) in zebrafish. Environ Pollut. 2018 Dec;243(Pt B):1517-1527.

Additional Infomation
6:2 Cl-PFAES is a critical reference standard in environmental and analytical chemistry. It belongs to a group of emerging PFAS contaminants, often referred to as "PFOS alternatives" due to their use as replacements for legacy PFOS (perfluorooctane sulfonate) in industrial applications like metal plating and firefighting foams. Unfortunately, research shows that these replacements also have significant toxicological profiles, including reproductive and developmental toxicity. The compound is used to monitor human and wildlife exposure to these novel PFAS compounds via LC-MS/MS methods. It is a tool for regulatory bodies (e.g., EPA) to assess the risks associated with environmental pollution. It is not a drug and has no therapeutic applications. It serves as a reference standard to ensure that scientists can accurately detect and quantify this pollutant in water, soil, and biological samples, thereby supporting efforts to study its environmental fate and health impacts. It is known to cause elevated serum estradiol and vitellogenin levels in adult males and impair embryonic development in offspring.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C8CLF16KO4S
Molecular Weight
570.67
Exact Mass
569.859
CAS #
73606-19-6
PubChem CID
25210512
Appearance
Colorless to off-white solid powder
LogP
5.78
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
20
Rotatable Bond Count
9
Heavy Atom Count
31
Complexity
762
Defined Atom Stereocenter Count
0
SMILES
C(C(C(C(F)(F)Cl)(F)F)(F)F)(C(C(OC(C(F)(F)S(=O)(=O)[O-])(F)F)(F)F)(F)F)(F)F.[K+]
InChi Key
OWQCHLFKOGVODW-UHFFFAOYSA-M
InChi Code
InChI=1S/C8HClF16O4S.K/c9-5(18,19)3(14,15)1(10,11)2(12,13)4(16,17)6(20,21)29-7(22,23)8(24,25)30(26,27)28;/h(H,26,27,28);/q;+1/p-1
Chemical Name
potassium 2-(6-chloro-1,1,2,2,3,3,4,4,5,5,6,6-dodecafluorohexoxy)-1,1,2,2-tetrafluoroethanesulfonate
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.7523 mL 8.7616 mL 17.5233 mL
5 mM 0.3505 mL 1.7523 mL 3.5047 mL
10 mM 0.1752 mL 0.8762 mL 1.7523 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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