PHA-767491 HCl

Alias: CAY10572 HCl; CAY-10572 HCl; CAY 10572 HCl; PHA767491 HCl; PHA-767491 HCl; PHA 767491 HCl
Cat No.:V2832 Purity: ≥98%
PHA-767491 HCl (formerlyknown as CAY10572 HCl) is a novel potent ATP-competitive and dual CDC7/CDK9 inhibitor with IC50 of 10 nM and 34 nM in cell-free assays, respectively.
PHA-767491 HCl Chemical Structure CAS No.: 942425-68-5
Product category: CDK
This product is for research use only, not for human use. We do not sell to patients.
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Other Forms of PHA-767491 HCl:

  • PHA-767491
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

PHA-767491 HCl (formerly known as CAY10572 HCl) is a novel potent ATP-competitive and dual CDC7/CDK9 inhibitor with IC50 of 10 nM and 34 nM in cell-free assays, respectively. It exhibits selectivity of approximately 20 times against CDK1/2 and GSK3-β, 50 times against MK2 and CDK5, and 100 times against PLK1 and CHK2. An important kinase called CDC7 stimulates replication origins to facilitate DNA replication. PHA-767491 inhibits the synthesis of DNA and modifies the replicative DNA helicase's phosphorylation at CDC7-dependent phosphorylation sites. PHA-767491, in contrast to existing DNA synthesis inhibitors, inhibits replication origin activation without impeding replication fork progression or causing a prolonged DNA damage response. In preclinical cancer models, PHA-767491 treatment induces apoptotic cell death in a variety of cancer cell types and inhibits tumor growth. PHA-767491 is the first known molecule to directly influence the mechanisms governing initiation rather than elongation in DNA replication, and its actions imply that inhibiting Cdc7 kinase may be a novel approach to the development of anticancer treatments.

Biological Activity I Assay Protocols (From Reference)
Targets
CDK9 (IC50 = 34 nM); CDK2 (IC50 = 240 nM); CDK1 (IC50 = 250 nM); CDK5 (IC50 = 460 nM); GSK3-β (IC50 = 220 nM); Mk2 (IC50 = 470 nM); Plk1 (IC50 = 980 nM); Chk2 (IC50 = 1100 nM)
ln Vitro

PHA-767491 exhibits selectivity of about 20-fold for Cdk1, Cdk2, and GSK3-β, 50-fold for MK2 and Cdk5, and 100-fold for PLK1 and CHK2. Unlike 5-FU or gemcitabine, which only works in a few cell lines, PHA-767491 significantly induces apoptosis in a p53-independent manner in almost all cell lines. It also inhibits cell proliferation in a variety of human cell lines, with IC50 values ranging from 0.86 μM for SF-268 to 5.87 μM for K562. PHA-767491 treatment at 5 μM specifically inhibits Cdc7 kinase and Mcm2 phosphorylation at the Cdc7-dependent Ser40 site, blocking the initiation of DNA replication but not replication fork progression, in contrast to current DNA synthesis inhibitors.[1] PHA-767491 treatment at 3 μM can significantly reduce the up-regulated Mcl-1 levels in ABT-737-resistant OCI-LY1 and SU-DHL-4 cells, possibly through Cdk9 inhibition, restoring the sensitivity to ABT-737. **[2]** When PHA-767491 is applied at 1 μM, it also causes direct mitochondrial dependent pro-apoptosis in quiescent chronic lymphocytic leukemia (CLL) cells via a similar mechanism (EC50 of 0.34-0.97 μM). PHA-767491 treatment at 5 μM inhibits Cdc7 instead of causing cell death in proliferating CLL cells stimulated by CD154 and interleukin-4, which results in the elimination of DNA synthesis.

ln Vivo
PHA-767491 administered twice daily for five days markedly inhibits the growth of HL60 xenograft in a dose-dependent manner with TGI of 50% and 92% at doses of 20 mg/kg and 30 mg/kg, respectively. This effect is also evident in A2780, Mx-1, and HCT-116 xenograft models and the DMBA-induced mammary carcinomas. It is associated with decreased phosphorylation of Mcm2 at the Cdc7-dependent site Ser40 [1].
Enzyme Assay
Increasing concentrations of each DDK inhibitor are pre-incubated for five minutes with 20 ng of purified human DDK. After adding 1.5 µM cold ATP and 10 µCi (γ)-32P ATP, the mixture is mixed with 50 mM Tris-HCl (pH 7.5), 10 mM MgCl2, and 1 mM DTT. It is then incubated for 30 minutes at 30°C. SDS-PAGE and autoradiography on HyBlot CL film are performed after the proteins are denatured in 1X Laemmli buffer at 100°C. One way to measure the kinase activity of DDK is to look for auto-phosphorylation. ImageJ is used to quantify 32P-labeled bands, and GraphPad is used to determine the IC50 values.
Cell Assay
There are 2500 cells plated in each well of 96-well plates used for assays. Cells undergo treatment with small molecule inhibitors after 24 hours, and they are then incubated at 37°C for 72 hours. Next, the cells undergo lysis, and the CellTiter-Glo assay is employed to quantify the ATP content, which serves as a marker of metabolically active cells. Utilizing GraphPad software, IC50 values are determined. 100,000 cells are plated per well in six-well plates used for assays. Small molecule inhibitors are applied to the cells after a day, and they are then cultured for different lengths of time. The cells are trypsinized, and 5 milliliters of phosphate-buffered saline are used to create a suspension. A 10-minute room temperature incubation is conducted after mixing 30 µL of this suspension with 30 µL of CellTiter-Glo reagent. The BioTek Synergy Neo Microplate Reader and EnVision 2104 Multilabel Reader are used to measure luminosity.
Animal Protocol
Female SCID mice subcutaneously implanted with HL60 cells, male Hsd, athymic nu-nu mice subcutaneously implanted with HCT116 cells, A2780 or Mx-1 cells, and female Sprague-Dawley rats with DMBA-induced mammary carcinomas
~50 mg/kg
Intravenous or oral administration twice a day
References

[1]. The potent Cdc7-Dbf4 (DDK) kinase inhibitor XL413 has limited activity in many cancer cell lines and discovery of potential new DDK inhibitor scaffolds. PLoS One. 2014 Nov 20;9(11):e113300.

[2]. Dual Inhibition of Cdc7 and Cdk9 by PHA-767491 Suppresses Hepatocarcinoma Synergistically with 5-Fluorouracil. Curr Cancer Drug Targets. 2015;15(3):196-204.

[3]. Cell division cycle 7-kinase inhibitor PHA-767491 hydrochloride suppresses glioblastoma growth and invasiveness. Cancer Cell Int. 2016 Nov 18;16:88.

[4]. A Cdc7 kinase inhibitor restricts initiation of DNA replication and has antitumor activity. Nat Chem Biol. 2008 Jun;4(6):357-65.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C12H11N3O.HCL
Molecular Weight
249.7
Exact Mass
249.0668897
Elemental Analysis
C, 57.72; H, 4.84; Cl, 14.20; N, 16.83; O, 6.41.
CAS #
942425-68-5
Related CAS #
PHA-767491;845714-00-3
Appearance
Solid powder
SMILES
C1CNC(=O)C2=C1NC(=C2)C3=CC=NC=C3.Cl
InChi Key
IMVNFURYBZMFDZ-UHFFFAOYSA-N
InChi Code
InChI=1S/C12H11N3O.ClH/c16-12-9-7-11(8-1-4-13-5-2-8)15-10(9)3-6-14-12;/h1-2,4-5,7,15H,3,6H2,(H,14,16);1H
Chemical Name
2-pyridin-4-yl-1,5,6,7-tetrahydropyrrolo[3,2-c]pyridin-4-one;hydrochloride
Synonyms
CAY10572 HCl; CAY-10572 HCl; CAY 10572 HCl; PHA767491 HCl; PHA-767491 HCl; PHA 767491 HCl
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ~24 mg/mL (~96.11 mM)
Water: <1mg/mL
Ethanol: <1mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 1 mg/mL (4.00 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 10.0 mg/mL clear DMSO stock solution to 400 μL of PEG300 and mix evenly; then add 50 μL of Tween-80 to the above solution and mix evenly; then add 450 μL of normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 1 mg/mL (4.00 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 10.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: 5% DMSO+30% PEG 300+2% Tween 80+ddH2O: 1mg/mL


Solubility in Formulation 4: 50 mg/mL (200.24 mM) in PBS (add these co-solvents sequentially from left to right, and one by one), clear solution; with ultrasonication.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.0048 mL 20.0240 mL 40.0481 mL
5 mM 0.8010 mL 4.0048 mL 8.0096 mL
10 mM 0.4005 mL 2.0024 mL 4.0048 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • PHA-767491(HCl)

    CDC7 inhibition suppresses glioblastoma cell invasion2016 Nov 18;16:88.
  • PHA-767491(HCl)

    CDC7 inhibition induces apoptosis in glioblastoma cells2016 Nov 18;16:88.

  • PHA-767491(HCl)

    CDC7 inhibition decreases glioblastoma cell viability in a time- and dose-dependent fashion2016 Nov 18;16:88..
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