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PF-00835231 (PF-835231)

Alias: PF 00835231; PF-00835231; PF00835231; PF 835231; PF-835231; PF835231;
Cat No.:V41524 Purity: ≥98%
PF-00835231 (PF-835231) is a potent 3CLpro [main protease (Mpro)] inhibitor developed by Pfizer for COVID-19treatment.
PF-00835231 (PF-835231)
PF-00835231 (PF-835231) Chemical Structure CAS No.: 870153-29-0
Product category: SARS-CoV
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
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Product Description
PF-00835231 (PF-835231) is a potent 3CLpro [main protease (Mpro)] inhibitor developed by Pfizer for COVID-19 treatment. It is the active component of the phosphate prodrug PF-07304814. 3CL protease is a virally encoded protein essentialfor a broad spectrum of coronaviruses with no close human analogs. PF-00835231 exhibited potent in vitro antiviral activity against SARS-CoV-2 as a single agent. PF-00835231 has additive/synergistic activity in combination with remdesivir.
PF-00835231 (PF-835231) is a potent inhibitor of SARS-CoV-1 and -2 main protease (3CLpro or Mpro) and exhibits potent in vitro antiviral activity. It has a CAS number of 870153-29-0 and a molecular weight of 472.53 g/mol, with a molecular formula of C24H32N4O6. PF-00835231 is a primary alcohol resulting from the cleavage of the phosphate group of the prodrug PF-07304814. It is a promising candidate for the treatment of COVID-19.
Biological Activity I Assay Protocols (From Reference)
Targets
3CLpro
PF-00835231 targets the SARS-CoV-2 main protease (3CLpro or Mpro), a cysteine protease essential for viral replication. The compound is a potent inhibitor of CoV-2 cysteine 3C-like protease (3CLpro) with an IC50 of 0.27 nM for SARS CoV-2 and 4 nM for SARS CoV-1 3CLpro. By inhibiting 3CLpro, PF-00835231 blocks the cleavage of viral polyproteins, preventing the formation of the viral replication complex.
ln Vitro
In vitro, PF-00835231 inhibits SARS CoV-2 3CLpro with an IC50 of 0.27 nM. It inhibits SARS CoV-1 3CLpro with an IC50 of 4 nM. The compound exhibits potent in vitro antiviral activity. PF-00835231 is a 3CLpro (Mpro) inhibitor that may target SARS-CoV-2 protease 3CLpro as a potential new treatment for COVID-19.
ln Vivo
In vivo activity data for PF-00835231 are not extensively detailed in the available sources. The compound is being investigated as a potential treatment for COVID-19. The prodrug PF-07304814, which is cleaved to release PF-00835231, has been evaluated in clinical settings. Specific in vivo efficacy data in animal models have not been reported in the supplier documentation.
Enzyme Assay
The in vitro enzyme assay for PF-00835231 involves measuring the inhibition of SARS-CoV-2 3CLpro enzymatic activity. Recombinant 3CLpro is incubated with a fluorogenic substrate (e.g., a peptide substrate with a fluorescent reporter) in the presence of varying concentrations of the compound. The IC50 values of 0.27 nM for SARS CoV-2 and 4 nM for SARS CoV-1 are determined from dose-response curves.
Cell Assay
Cellular assays for PF-00835231 are performed using SARS-CoV-2-infected cells. Cells are infected with the virus and treated with PF-00835231 at various concentrations. Viral replication is assessed by measuring viral RNA by RT-qPCR or by plaque assays. The compound's antiviral activity is determined by calculating EC50 values from dose-response curves.
Animal Protocol
In vivo animal studies for PF-00835231 are not detailed in the available sources. The compound is a research tool for studying SARS-CoV-2 3CLpro inhibition. The prodrug PF-07304814 has been evaluated in clinical settings for the treatment of COVID-19. Specific animal models and dosing regimens have not been described in the supplier documentation.
ADME/Pharmacokinetics
Pharmacokinetic data for PF-00835231 are not available in the provided sources. The compound has a molecular weight of 472.53 g/mol and a molecular formula of C24H32N4O6. It is a primary alcohol that results from the cleavage of the phosphate group of the prodrug PF-07304814. The compound is available with a purity of ≥95%.
Toxicity/Toxicokinetics
Toxicity data for PF-00835231 are not reported in the available sources. As a research compound, it is not intended for therapeutic use. The compound has been evaluated in preclinical studies as a potential treatment for COVID-19. Specific toxicological profiles have not been characterized in the supplier documentation.
References

[1]. Discovery of Ketone-Based Covalent Inhibitors of Coronavirus 3CL Proteases for the Potential Therapeutic Treatment of COVID-19. J Med Chem. 2020 Nov 12;63(21):12725-12747.

[2]. Preclinical characterization of an intravenous coronavirus 3CL protease inhibitor for the potential treatment of COVID19. Nat Commun. 2021 Oct 18;12(1):6055.

Additional Infomation
PF-00835231 is a primary alcohol derived from the cleavage of the phosphate group of the prodrug PF-07304814. It is an inhibitor of SARS-CoV-1 and its -2 main protease (3CLpro) and exhibits potent in vitro antiviral activity. It can be used as an anticoronavirus drug, an EC 3.4.22.69 (SARS coronavirus main protease) inhibitor, and a drug metabolite. It is an aromatic ether, L-leucine derivative, indolecarboxamide, pyrrolidone-2-one compound, secondary formamide, and primary alcohol.
PF-00835231 is a research compound for studying SARS-CoV-2 3CLpro inhibition and COVID-19 treatment. It is a potent inhibitor with IC50 values of 0.27 nM for SARS CoV-2 and 4 nM for SARS CoV-1 3CLpro. The compound is the active metabolite of the prodrug PF-07304814. It is available from commercial suppliers for research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C24H32N4O6
Molecular Weight
472.534086227417
Exact Mass
472.232
Elemental Analysis
C, 61.00; H, 6.83; N, 11.86; O, 20.31
CAS #
870153-29-0
Related CAS #
870153-29-0 70153-89-2 (racemic);870153-90-5; 870153-91-6;
PubChem CID
11561899
Appearance
White to off-white solid powder
LogP
1.6
Hydrogen Bond Donor Count
5
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
11
Heavy Atom Count
34
Complexity
760
Defined Atom Stereocenter Count
3
SMILES
CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)C(=O)CO)NC(=O)C2=CC3=C(N2)C=CC=C3OC
InChi Key
QDIMHKWNHMVDJB-WBAXXEDZSA-N
InChi Code
InChI=1S/C24H32N4O6/c1-13(2)9-18(23(32)27-17(20(30)12-29)10-14-7-8-25-22(14)31)28-24(33)19-11-15-16(26-19)5-4-6-21(15)34-3/h4-6,11,13-14,17-18,26,29H,7-10,12H2,1-3H3,(H,25,31)(H,27,32)(H,28,33)/t14-,17-,18-/m0/s1
Chemical Name
N-((S)-1-(((S)-4-hydroxy-3-oxo-1-((S)-2-oxopyrrolidin-3-yl)butan-2-yl)amino)-4-methyl-1-oxopentan-2-yl)-4-methoxy-1H-indole-2-carboxamide
Synonyms
PF 00835231; PF-00835231; PF00835231; PF 835231; PF-835231; PF835231;
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~250 mg/mL (~529.07 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (4.40 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (4.40 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.08 mg/mL (4.40 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.1163 mL 10.5813 mL 21.1627 mL
5 mM 0.4233 mL 2.1163 mL 4.2325 mL
10 mM 0.2116 mL 1.0581 mL 2.1163 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • Representative thermal shift binding data of PF-00835231 with SARS-CoV-2 3CLpro. [2].Nat Commun. 2021 Oct 18;12(1):6055
  • Antiviral activity across cell lines and viruses.[2].Nat Commun. 2021 Oct 18;12(1):6055
  • Measuring potential synergy between PF-00835231 and remdesivir in HeLa-ACE2 cells.[2].Nat Commun. 2021 Oct 18;12(1):6055
  • In vivo activity of PF-00835231 in mouse models of SARS-CoV infection.[2].Nat Commun. 2021 Oct 18;12(1):6055
  • PF-07304814 prodrug and PF-00835231 structures and dose considerations.[2].Nat Commun. 2021 Oct 18;12(1):6055
  • PF-07304814 (prodrug) and PF-00835231 in vivo exposure summary.[2].Nat Commun. 2021 Oct 18;12(1):6055
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