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Pectolinarigenin

Cat No.:V34289 Purity: ≥98%
Pectolinarigenin is a dual (bifunctional) inhibitor of COX-2/5-LOX.
Pectolinarigenin
Pectolinarigenin Chemical Structure CAS No.: 520-12-7
Product category: Natural Products
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Pectolinarigenin is a dual (bifunctional) inhibitor of COX-2/5-LOX. Has anti~inflammatory activity. Pectolinarigenin has a potent inhibitory activity against melanogenesis.
Pectolinarigenin (5,7-dihydroxy-4',6-dimethoxyflavone) is a flavonoid aglycone isolated from the ethylacetate fraction of Cirsium chanroenicum (Compositae) through bioactivity-guided fractionation. It was identified as an active anti-inflammatory principle that inhibits both cyclooxygenase-2 (COX-2)-mediated prostaglandin E2 (PGE2) production and 5-lipoxygenase (5-LOX)-mediated leukotriene (LT) synthesis, indicating it is a dual COX-2/5-LOX inhibitor. Pectolinarigenin does not affect COX-2 expression or NF-κB activation. In vivo, oral administration of Pectolinarigenin (20-100 mg/kg) shows inhibitory activities against arachidonic acid-induced mouse ear edema, carrageenan-induced mouse paw edema, and passive cutaneous anaphylaxis in rats. [1]
Pectolinarigenin is also the aglycone of pectolinarin, and studies from Cirsium setidens demonstrate that it inhibits melanogenesis in melan-a cells and a reconstructed human skin model, with more potent inhibitory activity than pectolinarin. It suppresses intracellular tyrosinase activity and down-regulates the expression of MITF, tyrosinase, TRP-1, and TRP-2 at both protein and mRNA levels. [2]
Biological Activity I Assay Protocols (From Reference)
Targets
5-LOX; COX-2
Cyclooxygenase-2 (COX-2): direct inhibition of COX-2 enzymatic activity (44.8% inhibition at 50 μM in COX-2-preinduced RAW 264.7 cells). [1]
5-Lipoxygenase (5-LOX): inhibition of 5-LOX-mediated leukotriene production (80.0% inhibition at 10 μM, 97.0% inhibition at 50 μM in A23187-treated RBL-1 cells). [1]
Tyrosinase: inhibition of intracellular tyrosinase activity (46.9±4.5% of control at 30 μM in melan-a cells). [2]
Microphthalmia-associated transcription factor (MITF): down-regulation of MITF protein expression (51.5±8.5% inhibition) and mRNA expression (32.3±1.0% reduction) in melan-a cells. [2]
ln Vitro
Pectolinarigenin (1-50 μM) significantly inhibited COX-2-mediated PGE2 production in LPS-treated RAW 264.7 cells: at 10 μM, PGE2 concentration was 1.8±0.1 mM (90.1% inhibition); at 25 μM, 1.0±0.0 mM (95.8% inhibition); at 50 μM, 0.6±0.0 mM (99.0% inhibition). It also inhibited 5-LOX-mediated LT (LTC4/D4/E4) production in A23187-treated RBL-1 cells: at 10 μM, LT concentration was 536.4±142.1 pg/ml (80.0% inhibition); at 50 μM, 113.3±13.1 pg/ml (97.0% inhibition). No significant cytotoxicity was observed up to 50 μM as measured by MTT assay. [1]
Pectolinarigenin (50 μM) inhibited PGE2 production from COX-2-preinduced RAW 264.7 cells by 44.8% when arachidonic acid (100 μM) was added as substrate, indicating direct inhibition of COX-2 enzymatic activity. [1]
Western blot analysis showed that Pectolinarigenin (10, 25, 50 μM) did not reduce COX-2 expression in LPS-treated RAW 264.7 cells. EMSA analysis demonstrated that Pectolinarigenin did not affect NF-κB activation. [1]
In melan-a cells, Pectolinarigenin (30 μM) reduced melanin content to 31.5±2.2% of control (17.4±6.2% reduction? Actually the paper says "reduced the melanin content to 31.5±2.2%" but careful: "to 31.5±2.2%" means remaining percentage? Actually Fig1B: pectolinarigenin reduced melanin content to 31.5±2.2% compared with controls - need to interpret. The text says "reduced the melanin content to 17.4±6.2% and 31.5±2.2% respectively" – likely a mistake. Based on context, pectolinarin reduced to 17.4%, pectolinarigenin to 31.5%. So inhibition by pectolinarigenin is about 68.5%? But we'll state exactly as per text: reduced to 31.5±2.2% of control. [2]
Intracellular tyrosinase activity in melan-a cells was suppressed by Pectolinarigenin (30 μM) to 46.9±4.5% of the control group. [2]
Western blotting in melan-a cells showed that Pectolinarigenin (30 μM) reduced protein expression of tyrosinase by 37.9±3.2%, TRP-1 by 42.0±2.6%, TRP-2 by 38.3±3.8%, and MITF by 51.5±8.5% compared to control. [2]
Q-PCR analysis in melan-a cells demonstrated that Pectolinarigenin (30 μM) reduced mRNA expression of tyrosinase by 55.0±6.1%, TRP-1 by 10.7±3.3%, and MITF by 32.3±1.0% relative to control. [2]
In a reconstructed human skin model (Neoderm®-ME), Pectolinarigenin (30 μM for 2 days) significantly reduced melanin content to 20.8% of the control group and decreased L-DOPA content as visualized by Fontana-Masson and L-DOPA staining. [2]
ln Vivo
Oral administration of Pectolinarigenin (20-100 mg/kg) inhibited arachidonic acid-induced mouse ear edema: at 20 mg/kg, ear thickness increase was 0.058±0.017 mm (18.7% inhibition); at 100 mg/kg, 0.048±0.016 mm (34.7% inhibition). Reference drug indomethacin at 20 mg/kg gave 0.015±0.021 mm (88.0% inhibition). [1]
Pectolinarigenin (20-100 mg/kg, oral) inhibited carrageenan-induced mouse paw edema: at 20 mg/kg, paw volume increase was 0.135±0.023 ml (13.2% inhibition); at 100 mg/kg, 0.120±0.051 ml (21.1% inhibition). Prednisolone at 20 mg/kg gave 0.078±0.021 ml (48.7% inhibition). [1]
Pectolinarigenin (20 mg/kg, oral twice, 1 h prior to each IgE and antigen injection) inhibited passive cutaneous anaphylaxis in rats: absorbance was 0.648±0.228 (30.8% inhibition) compared to allergen-treated control (0.807±0.139). Prednisolone (20 mg/kg×2) gave 0.439±0.256 (71.3% inhibition). [1]
Enzyme Assay
For direct COX-2 inhibition measurement, RAW 264.7 cells were incubated with LPS (1 μg/ml) for 24 h to induce COX-2 expression. After complete washing with serum-free DMEM, test compounds (including Pectolinarigenin) and arachidonic acid (100 μM) were added to the COX-2-preinduced cells. Following 15 minutes of incubation, PGE2 concentration in the media was measured using an ELISA kit. Pectolinarigenin at 50 μM showed 44.8% inhibition of PGE2 production. [1]
For 5-LOX activity assay, rat basophilic leukemia (RBL-1) cells were plated in 96-well plates. Test compounds (Pectolinarigenin) were added and preincubated for 10 minutes. To activate 5-LOX, A23187 (3 μM) was added and cells were incubated for 15 minutes. The concentration of 5-LOX products (cysteinyl leukotrienes LTC4/D4/E4) in the media was measured using an ELISA kit. Pectolinarigenin inhibited LT production with 80.0% inhibition at 10 μM and 97.0% at 50 μM. [1]
For intracellular tyrosinase activity measurement, melan-a cells were treated with or without Pectolinarigenin (30 μM) for 72 h. Cells were washed, lysed in 1% Triton X-100, and chilled on ice for 10 min. After centrifugation, the supernatant was collected as enzyme source. The reaction mixture contained 100 μl of 0.1 M phosphate buffer (pH 6.5), 100 μl of 20 mM L-DOPA, and 40 μg of cell lysate in a 96-well plate. Initial absorbance was measured at 490 nm, and the mixture was incubated at room temperature for 1 h before final absorbance measurement. Intracellular tyrosinase activity was estimated as the ratio to control. Pectolinarigenin reduced tyrosinase activity to 46.9±4.5% of control. [2]
Cell Assay
RAW 264.7 cells (mouse macrophage-like cell line) were cultured in DMEM with 10% FBS and 1% antibiotics under 5% CO2 at 37°C. Cells were plated in 96-well plates (2×10^5 cells/well). After pre-incubation for 2 h, test compounds (Pectolinarigenin) and LPS (1 μg/ml) were added and incubated for 24 h. Cell viability was assessed by MTT assay. PGE2 concentration in the media was measured using an ELISA kit. Pectolinarigenin inhibited PGE2 production in a concentration-dependent manner (1-50 μM). [1]
For COX-2 preinduction experiment, RAW 264.7 cells were incubated with LPS (1 μg/ml) for 24 h, then washed with serum-free DMEM. Test compounds (Pectolinarigenin) and arachidonic acid (100 μM) were added, and after 15 min PGE2 was measured. [1]
RBL-1 cells (rat basophilic leukemia) were cultured in RPMI 1640 with 10% FBS, 2 mM glutamine and 1% antibiotics under 5% CO2 at 37°C. Cells were plated in 96-well plates, test compounds (Pectolinarigenin) added and preincubated for 10 min, then A23187 (3 μM) added for 15 min. LT concentration in media was measured by ELISA. [1]
Melan-a cells were grown in RPMI 1640 medium supplemented with 10% FBS, 100 U/ml penicillin, 100 μg/ml streptomycin, and 200 nM TPA at 37°C in 5% CO2. For melanin content measurement, cells were seeded in 24-well plates (1×10^5 cells/well), incubated for 24 h, then treated with or without Pectolinarigenin (30 μM) for 72 h. Cells were washed, lysed with 2 N NaOH, and absorbance measured at 475 nm. [2]
For Western blotting, melan-a cells were harvested and homogenized at 4°C in lysis buffer. Protein concentrations were determined by BCA assay. 20 μg of protein was separated on 10% SDS-PAGE gels and transferred to PVDF membranes. Membranes were blocked with 5% skim milk and incubated with primary antibodies against tyrosinase, TRP-1, TRP-2, MITF, and GAPDH, followed by HRP-conjugated secondary antibodies. Bands were visualized using enhanced chemiluminescence. Pectolinarigenin (30 μM) reduced protein expression of these melanogenesis-related proteins. [2]
For Q-PCR analysis, total RNA was extracted using an RNeasy mini kit. cDNA was amplified using reverse transcription. SYBR green-based quantitative PCR was performed with specific primers for MITF, tyrosinase, TRP-1, TRP-2, and β-actin. Data were analyzed using the 2^-ΔΔCT method. Pectolinarigenin (30 μM) reduced mRNA levels of tyrosinase, TRP-1, and MITF. [2]
Reconstructed human skin model (Neoderm®-ME) consisting of human epidermal melanocytes and keratinocytes was incubated in serum-free maintenance medium with Pectolinarigenin (30 μM) for 2 days. Skin tissues were fixed in 10% formalin, embedded in paraffin, and stained for melanin using Fontana-Masson and L-DOPA staining methods. Melanin and L-DOPA contents were quantified using ImageJ software. [2]
Animal Protocol
Male ICR mice (4 weeks old, specific pathogen-free) were used for arachidonic acid-induced ear edema. Pectolinarigenin dissolved in DMSO (0.05 ml/mouse) was administered orally 1 h prior to arachidonic acid treatment. Arachidonic acid (2% in acetone, 20 μl/ear) was topically applied to mouse ears. One hour later, ear thickness was measured using a dial thickness gauge. [1]
Male ICR mice were used for carrageenan-induced paw edema. Pectolinarigenin dissolved in DMSO was administered orally. One hour later, 1% λ-carrageenan (w/v) dissolved in pyrogen-free sterile saline (0.05 ml per paw) was injected into the right hind paw. After 5 h, paw volume was measured using a plethysmometer. The increase in paw volume from the initial non-treated paw volume was regarded as edema. [1]
Male Sprague-Dawley rats were used for passive cutaneous anaphylaxis (PCA). The backs of the rats were shaved and injected intradermally with monoclonal anti-dinitrophenyl (DNP) mouse IgE (100 μl/site, 1:1000 dilution). After 48 h, PCA was induced by intravenous injection of the antigen (1 mg of DNP-bovine serum albumin) in PBS containing 1% Evans blue. Pectolinarigenin was orally administered twice, 1 h prior to each IgE and antigen injection. Thirty minutes after antigen challenge, the skin was removed, and dye that leaked into the skin was extracted and quantified. [1]
Toxicity/Toxicokinetics
No significant cytotoxicity was observed for Pectolinarigenin in RAW 264.7 cells at concentrations up to 50 μM as measured by MTT assay. [1]
Pectolinarigenin (30 μM) showed no cytotoxicity in melan-a cells as determined by MTT assay. [2]
References

[1]. Anti-inflammatory activity of pectolinarigenin and pectolinarin isolated from Cirsium chanroenicum. Biol Pharm Bull. 2008 Nov;31(11):2063-7.

[2]. Pectolinarigenin, an aglycone of pectolinarin, has more potent inhibitory activities on melanogenesis than pectolinarin.Biochem Biophys Res Commun. 2017 Nov 4;493(1):765-772.

Additional Infomation
Pectolinarigenin is a dimethoxyflavonoid, a 6,4'-dimethyl ether derivative of baicalin. It is a plant metabolite. It is a dimethoxyflavonoid and a dihydroxyflavonoid. Its function is related to that of baicalin. Pectolinarigenin has been reported to be found in sage, bees, and other organisms with relevant data.
Pectolinarigenin is a flavonoid with 5,7-dihydroxy-4',6-dimethoxyflavone structure. It is the aglycone of pectolinarin (pectolinarigenin 7-rhamnosyl-(1→6)-glucoside). The compound possesses anti-inflammatory activity by inhibiting eicosanoid formation (PGE2 and leukotrienes) through direct inhibition of COX-2 and 5-LOX enzymes, without affecting COX-2 expression or NF-κB activation. It also exhibits anti-melanogenic activity by down-regulating MITF and tyrosinase-related gene expression. [1][2]
The C-6 methoxyl group in Pectolinarigenin is suggested to be important for 5-LOX inhibitory activity, as flavonoids with 5,7-dihydroxyl substitution and C-6 hydroxyl/methoxyl group possess 5-LOX inhibitory activity. [1]
Orally administered Pectolinarigenin and its glycoside pectolinarin show similar in vivo anti-inflammatory potencies, possibly because pectolinarin is hydrolyzed to the aglycone form (Pectolinarigenin) in the intestine before entering the bloodstream. [1]
Pectolinarigenin has potential as a new anti-inflammatory/anti-allergic agent because COX inhibitors are used as anti-inflammatory agents and 5-LOX inhibitors show anti-allergic activity. [1]
Microwave irradiation under 1% acetic acid conditions can efficiently convert pectolinarin to Pectolinarigenin (increased pectolinarigenin content by 66.3% compared to control, while pectolinarin content decreased to 14.5%). [2]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C17H14O6
Molecular Weight
314.2895
Exact Mass
314.079
CAS #
520-12-7
PubChem CID
5320438
Appearance
Light yellow to yellow solid
Density
1.4±0.1 g/cm3
Boiling Point
565.5±50.0 °C at 760 mmHg
Melting Point
220-223°
Flash Point
212.3±23.6 °C
Vapour Pressure
0.0±1.6 mmHg at 25°C
Index of Refraction
1.646
LogP
2.64
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
3
Heavy Atom Count
23
Complexity
468
Defined Atom Stereocenter Count
0
SMILES
O1C(=C([H])C(C2C(=C(C(=C([H])C1=2)O[H])OC([H])([H])[H])O[H])=O)C1C([H])=C([H])C(=C([H])C=1[H])OC([H])([H])[H]
InChi Key
GPQLHGCIAUEJQK-UHFFFAOYSA-N
InChi Code
InChI=1S/C17H14O6/c1-21-10-5-3-9(4-6-10)13-7-11(18)15-14(23-13)8-12(19)17(22-2)16(15)20/h3-8,19-20H,1-2H3
Chemical Name
5,7-dihydroxy-6-methoxy-2-(4-methoxyphenyl)chromen-4-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~33.33 mg/mL (~106.05 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 1 mg/mL (3.18 mM) (saturation unknown) in 2% DMSO + 98% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

Solubility in Formulation 2: 1 mg/mL (3.18 mM) in 50% PEG300 50% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication (<60°C).
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.1818 mL 15.9089 mL 31.8177 mL
5 mM 0.6364 mL 3.1818 mL 6.3635 mL
10 mM 0.3182 mL 1.5909 mL 3.1818 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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