PD 169316

Alias: PD-169316; PD 169316; PD169316.
Cat No.:V3010 Purity: ≥98%
PD 169316 is a novel potent, cell-permeable and specific/selective inhibitor of p38 MAPK kinase with IC50 value of 89 nM.
PD 169316 Chemical Structure CAS No.: 152121-53-4
Product category: p38 MAPK
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description
PD 169316 is a novel potent, cell-permeable and specific/selective inhibitor of p38 MAPK kinase with IC50 value of 89 nM. Additionally, PD169316 was said to exhibit antiviral activity against Enterovirus71. Activin A and TGFbeta both start signaling when PD169316 is applied, but not bone morphogenetic protein (BMP) 4. Reduced Smad2 and Smad3 phosphorylation, nuclear translocation, and up-regulation of the TGFbeta target gene Smad7 are all effects of TGFbeta signaling inhibition, which is dose dependent. Since blocking p38 MAPK activity with a dominant negative form of p38 MAPK has no effect on TGFbeta/Smad signaling, reduced TGFbeta signaling is not caused by p38 MAPK activity being abolished. When cellular activities are solely attributed to p38 MAPK signaling when these inhibitors are used experimentally, care must be taken because the use of PD169316 at 5 MICROM or higher can block TGFbeta signaling activity.
Biological Activity I Assay Protocols (From Reference)
Targets
p38 MAPK (IC50 = 89 nM); TGF-β; Activin A; Enterovirus71
ln Vitro
PD169316 (10 μM) inhibits TGFβ and Activin A signaling but not BMP4 signaling in CaOV3 cells. In CaOV3 cells, PD169316 (0.2–20 μM) inhibits TGFβ-induced Smad2 nuclear translocation, Smad7 mRNA induction, and reporter gene activity[1]. In Nestin knockdown cells, PD169316 (10 μM) exhibits a noticeably higher rate of proliferation, and it can reverse the effect of Nestin knockdown on cell viability in the absence of EGF[2]. In PC12 cells, PD169316 significantly reduces p38 MAP kinase activity while having no effect on ERK activity. In differentiated PC12 cells, PD169316 (10 μM) inhibits the apoptosis that is brought on by the removal of trophic factors[3]. Without preventing upstream kinases from phosphorylating p38, PD169316 (10 μM, 30 min) selectively inhibits the kinase activity of the phosphorylated p38. Increased phospho p-38 levels in the presence of PD169316 are most likely caused by MAPK phosphatases blocking the negative feedback loop of p38 MAPK dephosphorylation[4].
ln Vivo
PD169316 PD169316 (1 mg/kg, intramuscular injection every day for 14 days straight) exhibits antiviral activity in a suckling mouse model[5].
Enzyme Assay
The cells are incubated in the absence or presence of insulin (50 ng/mL) for 15 min at 37°C sixteen hours after the removal of serum from Rat-1 fibroblasts or NGF from differentiated PC12 cells. The cells are then solubilized in 400 μL of ice-cold immunoprecipitation buffer, which contains 10 mM Tris, pH 7.4, 1% Triton X-100, 0.5% Nonidet P-40, 150 mM NaCl, 1 mM EDTA, 1 mM EGTA, 0.2 mM sodium orthovanadate, and 0.2 mM phenylmethylsulfonyl fluoride. The cell lysates are centrifuged to remove insoluble material, and 200 g of the supernatant protein (400 μL, total volume) is incubated with 1 μg of anti-p38 antibodies for 1 h at 4°C before being incubated with 30 μL of Protein G Plus/Protein A-agarose for an additional hour. The immunocomplexes are pelleted, washed three times in immunoprecipitation buffer, and then once in kinase ish buffer (50 mM β-glycerolphosphate, 1 mM EGTA, 20 mM MgCl2, and 100 μM sodium orthovanadate). The protein kinase assay is initiated by the addition of 20 μL of 2× reaction buffer (50 mMβ-glycerolphosphate, 1 mM EGTA, 20 mM MgCl2, 100 μM sodium orthovanadate, 0.1 mg/mL ATF-2 (N-terminal half), 50 μg/mL IP20, a peptide inhibitor of c-AMP dependent protein kinase, 200 μM ATP, and 0.9 mCi/mL [32P]ATP) to 20 μL of immune complex. The reaction is allowed to run for 10 minutes at 30 degrees Celsius before being stopped by adding 2× LaemmLi sample buffer. This reaction is then examined using 12% acrylamide gels and SDS-polyacrylamide gel electrophoresis. The gels are dried and then put through phosphoimaging after electrophoresis.
Cell Assay
KBU cells are subjected to 12 ppm G. pps either alone or in combination with 1 hour of pre-exposure to the P38 inhibitor PD169316, and their proliferation (MTT), apoptosis (Ann V), and changes in the degree of protein modifications in the SAPK/JNK and P38 signaling pathways are assessed.
Animal Protocol
EV71-challenged suckling mouse model (7-day-old Kunming mice)[5].
1 mg/kg.
Intramuscular injection every day for 14 consecutive days.
References

[1]. The p38 MAPK inhibitor, PD169316, inhibits transforming growth factor beta-induced Smad signaling in human ovarian cancer cells. Biochem Biophys Res Commun. 2003 Oct 17;310(2):391-7.

[2]. Suppression of Nestin reveals a critical role for p38-EGFR pathway in neural progenitor cell proliferation. Oncotarget. 2016 Dec 27;7(52):87052-87063.

[3]. Apoptosis induced by withdrawal of trophic factors is mediated by p38 mitogen-activated protein kinase. J Biol Chem. 1997 Aug 15;272(33):20490-4.

[4]. p38 and p42/44 MAPKs differentially regulate progesterone receptor A and B isoform stabilization. Mol Endocrinol. 2011 Oct;25(10):1710-24.

[5]. PD169316, a specific p38 inhibitor, shows antiviral activity against Enterovirus71. Virology. 2017 Aug;508:150-158.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C20H13FN4O2
Molecular Weight
360.34
Exact Mass
360.1023
Elemental Analysis
C, 66.66; H, 3.64; F, 5.27; N, 15.55; O, 8.88
CAS #
152121-53-4
Related CAS #
152121-53-4
Appearance
white solid powder
SMILES
C1=CC(=CC=C1C2=NC(=C(N2)C3=CC=NC=C3)C4=CC=C(C=C4)F)[N+](=O)[O-]
InChi Key
BGIYKDUASORTBB-UHFFFAOYSA-N
InChi Code
InChI=1S/C20H13FN4O2/c21-16-5-1-13(2-6-16)18-19(14-9-11-22-12-10-14)24-20(23-18)15-3-7-17(8-4-15)25(26)27/h1-12H,(H,23,24)
Chemical Name
4-[4-(4-fluorophenyl)-2-(4-nitrophenyl)-1H-imidazol-5-yl]pyridine
Synonyms
PD-169316; PD 169316; PD169316.
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ~14 mg/mL ( ~38.6 mM)
Water: Insoluble
Ethanol: Insoluble
Solubility (In Vivo)
Solubility in Formulation 1: 1.25 mg/mL (3.47 mM) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 12.5 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: 1.25 mg/mL (3.47 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 12.5 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 1.25 mg/mL (3.47 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 12.5 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


Solubility in Formulation 4: 5%DMSO+40%PEG300+5%Tween 80+ 50%ddH2O: 0.7mg/ml (1.94mM)

Solubility in Formulation 5: 5 mg/mL (13.88 mM) in 50% PEG300 50% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.7752 mL 13.8758 mL 27.7516 mL
5 mM 0.5550 mL 2.7752 mL 5.5503 mL
10 mM 0.2775 mL 1.3876 mL 2.7752 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data

  • PD 169316

    Nestin knockdown reduces cyclin D1 expression and induces cell cycle arrest of mNPCs2016 Dec 27;7(52):87052-87063.

  • PD 169316

    Nestin knockdown promote neuronal differentiation of NPCs2016 Dec 27;7(52):87052-87063.

  • PD 169316

    Nestin knockdown-induced growth arrest of mNPCs in vitro2016 Dec 27;7(52):87052-87063.
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