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Omeprazole metabolite Omeprazole sulfone

Cat No.:V28934 Purity: ≥98%
Omeprazole sulfone is a metabolite of Omeprazole.
Omeprazole metabolite Omeprazole sulfone
Omeprazole metabolite Omeprazole sulfone Chemical Structure CAS No.: 88546-55-8
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
2mg
5mg
10mg
25mg
50mg
Other Sizes

Other Forms of Omeprazole metabolite Omeprazole sulfone:

  • Omeprazole (H 16868)
  • Omeprazole metabolite Omeprazole sulfone-13C,d3
Official Supplier of:
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Product Description
Omeprazole sulfone is a metabolite of Omeprazole.
Omeprazole sulfone (CAS: 88546-55-8) is a major metabolite of the proton pump inhibitor omeprazole. With a molecular formula of C17H19N3O4S and a molecular weight of 361.42 g/mol, it is formed from omeprazole by the cytochrome P450 isoform CYP3A4. It is a sulfoxide and a member of the benzimidazoles.
Biological Activity I Assay Protocols (From Reference)
Targets
Omeprazole sulfone does not have a direct pharmacological target. It is an inactive metabolite of omeprazole. Its formation is a key step in the metabolism and elimination of the parent drug. It is often used as a marker for CYP3A4 activity, as its formation is dependent on this enzyme.
ln Vitro
In vitro, Omeprazole sulfone is characterized by its formation from omeprazole. It is used as a probe to study CYP3A4 activity in liver microsomes or recombinant enzyme systems. Its concentration is measured by HPLC or LC-MS/MS. It does not exhibit the proton pump inhibitory activity of its parent compound.
ln Vivo
In vivo, Omeprazole sulfone is the primary metabolite of omeprazole found in plasma and urine. Its levels can be used to assess the metabolic activity of CYP3A4 in patients. As an inactive metabolite, it does not contribute to the therapeutic effects of omeprazole but is important for its clearance from the body.
Enzyme Assay
The in vitro enzyme assay for Omeprazole sulfone involves measuring the formation of the metabolite from omeprazole by CYP3A4. Liver microsomes or recombinant CYP3A4 are incubated with omeprazole and NADPH. The reaction is stopped, and the amount of omeprazole sulfone produced is quantified by HPLC or LC-MS/MS. The rate of formation is used as a measure of enzyme activity.
Cell Assay
In vitro cell culture studies are not typically performed for Omeprazole sulfone, as it is a metabolite. However, its effects on cell lines can be studied to assess its potential toxicity or off-target effects. It is primarily used as an analytical standard in metabolic studies rather than as a tool in cell-based assays.
Animal Protocol
In vivo animal experiments for Omeprazole sulfone are not typically performed, as it is a metabolite. However, pharmacokinetic studies in animals often measure its levels to understand the metabolism and disposition of omeprazole. Its concentration in plasma and tissues can be measured to assess the extent of CYP3A4-mediated metabolism.
ADME/Pharmacokinetics
Metabolism / Metabolites
Omeprazole sulfone is a known human metabolite of esomeprazole and omeprazole.
Omeprazole sulfone has a molecular formula of C17H19N3O4S and a molecular weight of 361.42 g/mol. It is a solid compound that is soluble in DMSO (10 mM). It is typically stored as a powder at -20°C for long-term stability. Its stability is maintained under recommended storage conditions. It is a white to off-white solid.
Toxicity/Toxicokinetics
Toxicological data for Omeprazole sulfone are limited, as it is a metabolite. It is generally considered to have low toxicity, as it is a natural product of drug metabolism. However, as a research compound, it is not intended for human use, and comprehensive toxicity studies are not available. Standard safety precautions should be followed.
Additional Infomation
Omeprazole sulfone is a sulfoxide that belongs to the benzimidazole class of compounds.
Omeprazole sulfone is a research compound and an analytical standard. It has no clinical approval as a therapeutic agent. It is used as a reference standard in analytical chemistry and pharmacokinetic studies to quantify omeprazole metabolism. It is also used as a marker for CYP3A4 activity in drug metabolism research.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C17H19N3O4S
Molecular Weight
361.41546
Exact Mass
361.109
CAS #
88546-55-8
Related CAS #
Omeprazole;73590-58-6;Omeprazole sulfone-d3;Omeprazole sulfone-13C,d3;1261393-28-5
PubChem CID
145900
Appearance
White to off-white solid powder
Density
1.3±0.1 g/cm3
Boiling Point
599.3±60.0 °C at 760 mmHg
Melting Point
80-82ºC
Flash Point
316.2±32.9 °C
Vapour Pressure
0.0±1.7 mmHg at 25°C
Index of Refraction
1.609
LogP
3.87
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
5
Heavy Atom Count
25
Complexity
553
Defined Atom Stereocenter Count
0
InChi Key
IXEQEYRTSRFZEO-UHFFFAOYSA-N
InChi Code
InChI=1S/C17H19N3O4S/c1-10-8-18-15(11(2)16(10)24-4)9-25(21,22)17-19-13-6-5-12(23-3)7-14(13)20-17/h5-8H,9H2,1-4H3,(H,19,20)
Chemical Name
6-methoxy-2-[(4-methoxy-3,5-dimethylpyridin-2-yl)methylsulfonyl]-1H-benzimidazole
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~250 mg/mL (~691.72 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (5.76 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (5.76 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.7669 mL 13.8343 mL 27.6686 mL
5 mM 0.5534 mL 2.7669 mL 5.5337 mL
10 mM 0.2767 mL 1.3834 mL 2.7669 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
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  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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