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MZ1

Alias: MZ1; MZ-1; MZ 1.
Cat No.:V3580 Purity: ≥98%
MZ 1 (MZ1; MZ-1) is a novel and potentPROTAC-based degrader of BRD4protein with anticancer activity.
MZ1
MZ1 Chemical Structure CAS No.: 1797406-69-9
Product category: PROTACs
This product is for research use only, not for human use. We do not sell to patients.
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Other Forms of MZ1:

  • cis-MZ 1 hydrate
  • cis-MZ 1
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Top Publications Citing lnvivochem Products
Purity & Quality Control Documentation

Purity: ≥98%

Product Description

MZ 1 (MZ1; MZ-1) is a novel and potent PROTAC-based degrader of BRD4 protein with anticancer activity. Inducing macromolecular interactions with small molecules to activate cellular signaling is a challenging goal. PROTACs (proteolysis-targeting chimeras) are bifunctional molecules that recruit a target protein in proximity to an E3 ubiquitin ligase to trigger protein degradation. Structural elucidation of the key ternary ligase-PROTAC-target species and its impact on target degradation selectivity remain elusive.

Biological Activity I Assay Protocols (From Reference)
Targets
MZ1 targets bromodomain and extra-terminal (BET) family protein BRD4 (bromodomain-containing protein 4, BD1 and BD2 domains) and von Hippel-Lindau (VHL) E3 ubiquitin ligase. Kd values: BRD4 BD1 (0.4 nM), BRD4 BD2 (0.8 nM). [1]

MZ1 binds to BRD4 BD1/BD2 and VHL, forming a ternary complex through cooperative recognition. [2]
ln Vitro
Through a 3-unit PEG linker, MZ 1 binds the pan-BET prototype JQ1 to VH032, a highly resonant VHL ligand [2]. In LS174t cells, MZ 1 (100 and 250 nM; 24 hours) causes BRD4 degradation. Without lowering the expression of BRD4 mRNA, MZ 1 completely degrades the BRD4 protein [3].
1. MZ1 selectively degrades BRD4 in a concentration- and time-dependent manner: Treatment of MV4;11 acute myeloid leukemia (AML) cells with MZ1 (0.1–100 nM) for 4 hours induces BRD4 degradation (DC50 = 1.8 nM, Western blot, n=3 independent experiments). Treatment with 10 nM MZ1 shows maximal BRD4 degradation at 4 hours, with no recovery up to 24 hours post-washout. [1]

2. MZ1 exhibits high selectivity for BRD4 over other BET family members: In MV4;11 cells, 10 nM MZ1 (4-hour treatment) degrades BRD4 by >90% but has minimal effect on BRD2/3 (Western blot, n=3). Bromodomain profiling confirms no significant binding to non-BET bromodomains. [1]

3. MZ1 suppresses MYC expression and downstream signaling: In MV4;11 cells, 10 nM MZ1 (4-hour treatment) reduces MYC protein levels by ~80% (Western blot) and MYC mRNA levels by ~70% (qPCR, n=3 triplicates). It also downregulates MYC target genes (CCND2, CDK6, BCL2) at the mRNA level. [1]

4. MZ1 inhibits cell proliferation and induces apoptosis: MV4;11 cells treated with MZ1 for 72 hours show antiproliferative activity (IC50 = 3.2 nM, CellTiter-Glo assay, n=3 triplicates). Treatment with 10 nM MZ1 for 24 hours activates caspase-3/7 (2.5-fold increase vs. DMSO, Caspase-Glo assay, n=3 triplicates) and induces PARP cleavage (Western blot). [1]

5. MZ1-mediated BRD4 degradation is VHL- and proteasome-dependent: Pretreatment of MV4;11 cells with VHL inhibitor VH032 (1 μM) or proteasome inhibitor MG132 (5 μM) for 1 hour blocks MZ1-induced BRD4 degradation (10 nM, 4-hour treatment, Western blot, n=3). CRISPR/Cas9-mediated VHL knockout abolishes BRD4 degradation by MZ1. [1]

6. MZ1 forms a stable ternary complex with BRD4 and VHL: AlphaScreen assay shows MZ1 promotes BRD4-VHL interaction with an EC50 of 0.3 nM (n=3 triplicates). Isothermal titration calorimetry (ITC) and surface plasmon resonance (SPR) confirm direct binding to both targets. [1]

7. Structural basis of cooperative recognition: MZ1 bridges BRD4 BD2 and VHL through its linker region, inducing conformational changes in both proteins that enhance binding affinity. The ternary complex structure reveals key hydrophobic and hydrogen-bonding interactions between MZ1 and BRD4/VHL. [2]
ln Vivo
1. MZ1 induces BRD4 degradation and MYC suppression in tumor xenografts: Female Nu/Nu mice bearing MV4;11 xenografts receive a single subcutaneous injection of MZ1 (10 mg/kg). Tumor tissues collected at 6 hours post-dose show >80% BRD4 degradation and ~70% MYC downregulation (Western blot, n=5 mice per group). [1]

2. MZ1 exerts dose-dependent tumor growth inhibition: MV4;11 xenograft mice are treated with subcutaneous MZ1 (3 mg/kg, 10 mg/kg) or vehicle once daily for 14 days. The 10 mg/kg dose inhibits tumor growth by 78% (mean tumor volume vs. vehicle, n=8 mice per group) without significant body weight loss. [1]
Enzyme Assay
1. BRD4 bromodomain binding assay (SPR): Recombinant BRD4 BD1 or BD2 domains are immobilized on a sensor chip. MZ1 is serially diluted and injected over the chip, and binding responses are recorded to calculate Kd values. The assay is performed in triplicate, with DMSO as a negative control. [1]

2. Ternary complex formation assay (AlphaScreen): Recombinant BRD4 BD2 and VHL-HIF1α complex are mixed with serial dilutions of MZ1. The formation of BRD4-MZ1-VHL ternary complexes is detected by AlphaScreen signal amplification, and EC50 values are calculated from triplicate measurements. [1]

3. Isothermal titration calorimetry (ITC): MZ1 is titrated into solutions containing recombinant BRD4 BD1/BD2 or VHL-HIF1α complex. Heat changes associated with binding are measured to determine binding affinity (Kd) and thermodynamic parameters (ΔH, ΔS). Experiments are performed in duplicate at 25°C. [1]

4. Bromodomain selectivity profiling: A panel of recombinant bromodomains (42 family members) is incubated with MZ1. Binding is detected using a competition assay with a fluorescent acetyl-lysine peptide, and selectivity scores are calculated to confirm preferential binding to BRD4 BD1/BD2. [1]
Cell Assay
Western Blot analysis [3]
Cell Types: LS174t Cell
Tested Concentrations: 0, 100 and 250 nM
Incubation Duration: 24 hrs (hours)
Experimental Results: BRD4 protein was completely degraded, but BRD4 mRNA expression was not diminished.
1. BRD4 degradation and MYC expression Western blot: MV4;11 cells are treated with serial dilutions of MZ1 (0.1–100 nM) for 4 hours (concentration-dependent) or 10 nM MZ1 for 0–24 hours (time-dependent). Cell lysates are prepared, and BRD4, MYC, and PARP cleavage are detected by Western blot, with GAPDH as a loading control. [1]

2. VHL/proteasome dependence assay: MV4;11 cells or VHL-knockout MV4;11 cells are pretreated with VH032 (1 μM), MG132 (5 μM), or vehicle for 1 hour, then treated with 10 nM MZ1 for 4 hours. BRD4 levels are analyzed by Western blot to verify pathway dependence. [1]

3. Cell proliferation assay: MV4;11 cells are seeded in 96-well plates (5,000 cells/well) and treated with serial dilutions of MZ1 (0.01–100 nM) for 72 hours. Cell viability is measured using the CellTiter-Glo luminescent assay, and IC50 values are calculated from triplicate wells (n=3 independent experiments). [1]

4. Apoptosis assay: MV4;11 cells are treated with 10 nM MZ1 or vehicle for 24 hours. Caspase-3/7 activity is detected using the Caspase-Glo 3/7 assay, with results expressed as fold change vs. vehicle (n=3 triplicates). [1]

5. qPCR for MYC target genes: MV4;11 cells are treated with 10 nM MZ1 or vehicle for 4 hours. Total RNA is extracted, reverse-transcribed into cDNA, and qPCR is performed with specific primers for MYC, CCND2, CDK6, and BCL2 (GAPDH as internal control, n=3 triplicates). [1]
Animal Protocol
1. MV4;11 xenograft model (Nu/Nu mice): Female Nu/Nu mice (6–8 weeks old) are subcutaneously implanted with 5×10⁶ MV4;11 cells. When tumors reach 100–150 mm³, mice are randomized into treatment groups (n=5–8 per group). MZ1 is administered via subcutaneous injection at doses of 3 mg/kg, 10 mg/kg, or vehicle once daily for 14 days. Tumor volume and body weight are measured every 2 days. For pharmacodynamic analysis, mice receive a single 10 mg/kg dose, and tumors are collected 6 hours post-dose for Western blot. [1]
ADME/Pharmacokinetics
1. MZ1 showed good plasma exposure in mice: after a single subcutaneous injection of MZ1 (10 mg/kg) in Nu/Nu mice, the peak plasma concentration (Cmax) reached 1.2 μM 1 hour after administration, and the half-life (t1/2) was 4.8 hours (n=3 mice at each time point). [1]
Toxicity/Toxicokinetics
1. MZ1 was well tolerated in mice: daily subcutaneous injection of MZ1 (up to 10 mg/kg) for 14 days did not cause significant weight loss (>5%) or significant organ toxicity (histopathological analysis of liver, kidney and spleen, n=8 mice per group). [1]
References

[1]. Selective Small Molecule Induced Degradation of the BET Bromodomain Protein BRD4. ACS Chem Biol. 2015 Aug 21;10(8):1770-7.

[2]. Structural basis of PROTAC cooperative recognition for selective protein degradation. Nat Chem Biol. 2017 May;13(5):514-521.

[3]. Targeting bromodomain-containing protein 4 (BRD4) inhibits MYC expression in colorectal cancer cells. Neoplasia. 2019 Nov;21(11):1110-1120.

Additional Infomation
MZ1 is an organic molecular entity.
1. MZ1 is the first selective BRD4 degrader developed using PROTAC (proteolytic targeted chimera) technology, consisting of a BRD4 binding moiety (JQ1 derivative), a VHL binding ligand, and a polyethylene glycol (PEG) linker. [1]
2. The synergistic recognition between MZ1, BRD4, and VHL is crucial to its high selectivity and efficacy: MZ1 induces a “folding” conformation of VHL, thereby creating a complementary binding interface for the BRD4 BD2 domain. [2]
3. MZ1 overcomes the limitations of BRD4 inhibitors by directly degrading BRD4 rather than blocking its bromine domain, thereby achieving more durable MYC inhibition and antitumor activity. [1]

4. BRD4 is a key regulator of transcriptional elongation, and its overexpression is associated with hematologic malignancies (e.g., acute myeloid leukemia) and solid tumors, thus making it a validated therapeutic target. [1]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C49H60CLN9O8S2
Molecular Weight
1002.63920783997
Exact Mass
1001.369
Elemental Analysis
C, 58.70; H, 6.03; Cl, 3.54; N, 12.57; O, 12.77; S, 6.40
CAS #
1797406-69-9
Related CAS #
cis-MZ 1;1797406-72-4
PubChem CID
122201421
Appearance
White to light yellow solid powder
LogP
5
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
14
Rotatable Bond Count
21
Heavy Atom Count
69
Complexity
1750
Defined Atom Stereocenter Count
4
SMILES
ClC1C=CC(=CC=1)C1C2C(C)=C(C)SC=2N2C(C)=NN=C2[C@H](CC(NCCOCCOCCOCC(N[C@H](C(N2C[C@@H](C[C@H]2C(NCC2C=CC(C3=C(C)N=CS3)=CC=2)=O)O)=O)C(C)(C)C)=O)=O)N=1
InChi Key
IHNPXDBPGMBPCY-BAVOTMDYSA-N
InChi Code
InChI=1S/C49H60ClN9O7S2/c1-29-31(3)68-48-41(29)42(34-14-16-36(50)17-15-34)54-37(45-57-56-32(4)59(45)48)25-39(60)51-18-20-64-21-22-65-23-24-66-27-40(61)55-44(49(5,6)7)47(63)58-19-8-9-38(58)46(62)52-26-33-10-12-35(13-11-33)43-30(2)53-28-67-43/h10-17,28,37-38,44H,8-9,18-27H2,1-7H3,(H,51,60)(H,52,62)(H,55,61)/t37-,38-,44+/m0/s1
Chemical Name
1-[2(S)-(2-{2-[2-(2-{2-[4-(4-Chloro-phenyl)-2,3,9-trimethyl-6H-1-thia-5,7,8,9a-tetraaza-cyclopenta[e]azulen-6(S)-yl]-acetylamino}-ethoxy)-ethoxy]-ethoxy}-acetylamino)-3,3-dimethyl-butyryl]-pyrrolidine-2(S)-carboxylic acid 4-(4-methyl-thiazol-5-yl)-benzylamide
Synonyms
MZ1; MZ-1; MZ 1.
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~99.74 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (2.49 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (2.49 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (2.49 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.9974 mL 4.9868 mL 9.9737 mL
5 mM 0.1995 mL 0.9974 mL 1.9947 mL
10 mM 0.0997 mL 0.4987 mL 0.9974 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • MZ1


    The crystal structure of the Brd4BD2:MZ1:VHL-ElonginC-ElonginB complex.2017 May;13(5):514-521.

  • MZ1


    Brd4BD2and VHL form a stable, cooperative complex in the presence of MZ1.

    MZ1

    Schematic model of selective PROTAC-induced target degradation.2017 May;13(5):514-521.

  • MZ1


    The molecular basis of MZ1-induced compact complex formation between Brd4BD2and VHL.

    MZ1

    Structure-guided design and characterization of Brd4-selective degrader AT1.2017 May;13(5):514-521.

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