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LENIOLISIB

Alias: CDZ-173; Joenja; CDZ 173; CDZ173
Cat No.:V3968 Purity: ≥98%
Leniolisib (formerly CDZ173; CDZ-173; Joenja)is a novel, potent and selective PI3K (phosphatidylinositol 3-kinase inhibitor) inhibitor with immunomodulatory effects.
LENIOLISIB
LENIOLISIB Chemical Structure CAS No.: 1354690-24-6
Product category: PI3K
This product is for research use only, not for human use. We do not sell to patients.
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Other Forms of LENIOLISIB:

  • LENIOLISIB PHOSPHATE
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

Leniolisib (formerly CDZ173; CDZ-173; Joenja) is a novel, potent and selective PI3K (phosphatidylinositol 3-kinase inhibitor) inhibitor with immunomodulatory effects. With IC50 values for PI3K of 0.244, 0.424, 2.23, and 0.011 M, PI3K, PI3K, PI3K, and PI3K, respectively, it inhibits PI3K. Clinical trials for the treatment of immunodeficiency disorders are currently in phase II/III. Ex vivo measurements of the PI3K/AKT pathway activity were reduced in a dose-dependent manner by oral leniolisib, which also improved immune dysregulation. The specific inhibition of PI3K as a promising new targeted therapy in APDS and other diseases characterized by overactivation of the PI3K pathway is supported by leniolisib's well-tolerated side effects and improved laboratory and clinical parameters in APDS. ClinicalTrials.gov records this trial under the identifier #NCT02435173. It was given FDA approval in March 2023 to treat the uncommon primary immunodeficiency known as activated phosphoinositide 3-kinase delta syndrome (APDS).

Biological Activity I Assay Protocols (From Reference)
Targets
PI3Kδ ( IC50 = 11 nM); PI3Kα ( IC50 = 280 nM); PI3Kβ ( IC50 = 480 nM); PI3Kγ ( IC50 = 2.57 μM); DNA-PK ( IC50 = 880 nM)
Leniolisib inhibits phosphorylation of AKT or S6, a pathway activity indicator that is elevated when APDS mutant p110 is expressed in cell lines and patient-derived lymphocytes, in a concentration-dependent manner[1].
ln Vitro
Leniolisib inhibits phosphorylation of AKT or S6, a pathway activity indicator that is elevated when APDS mutant p110 is expressed in cell lines and patient-derived lymphocytes, in a concentration-dependent manner[1].
In Rat-1 fibroblasts transfected with APDS-causing p110δ mutants (N334K, C416R, E525K, E1021K), leniolisib reduced phosphorylated AKT (pAKT) levels in a concentration-dependent manner, while the mTOR inhibitor everolimus did not. [1]
In T-cell blasts from APDS patients, leniolisib pretreatment inhibited T-cell receptor stimulation-induced phosphorylation of AKT and S6 in a dose-dependent manner, regardless of the specific PIK3CD mutation. [1]
ln Vivo
The immune dysregulation is resolved by oral leniolisib, which also results in a dose-dependent decrease in PI3K/AKT pathway activity, normalization of circulating transitional and naive B cells, and a decrease in PD-1+CD4+ and senescent CD57+CD8+ T cells. All patients exhibit improvement in lymphoproliferation after 12 weeks of therapy, with decreases in lymph node sizes and spleen volumes of 39% (mean, range, 26-57%) and 40% (mean, range, 13-65%), respectively[1].
In a 12-week open-label, dose-escalation clinical trial in 6 APDS patients, oral leniolisib (10, 30, 70 mg twice daily) led to dose-dependent reduction in PI3K/AKT pathway activity in B cells, normalization of transitional and naive B-cell frequencies, reduction in PD-1⁺CD4⁺ and CD57⁺CD4⁻ T cells, and decreases in serum IgM and inflammatory cytokines/chemokines. [1]
After 12 weeks, lymph node size decreased by 40% (mean) and spleen volume by 39% (mean). All patients showed clinical improvement in lymphoproliferation and cytopenias. [1]
Enzyme Assay
Biochemical assays for PI3K isoforms and other lipid kinases [2]
\nKinaseGlo format [2]
\nThe inhibitory kinase activities on PI3Kα and PI3Kβ were determined using phosphatidyl inositol (PI) as substrate in n-Octyl-Glucoside (OG) using a luminescence assays based on ATP consumption (KinaseGlo). Some 50 nl of compound dilutions were dispensed onto black 384-well plates (Greiner Cat. No.784076). L-α-phosphatidylinositol (PI), provided as 10 mg/ml solution in methanol, was transferred into a glass tube and dried under nitrogen beam. It was then resuspended in 3% (v/v) Octylglucoside by vortexing and stored at 4°C. Some 4.5μl of a mix of PI/OG with 10 nM PI3Kα or 0.75 μg/ml PI3Kβ was added. The kinase reactions were started by addition of 4.5 μl of ATP-mix containing in a final volume of 9 μl the following: 10 mM TRIS-HCl pH 7.5, 3 mM MgCl2 or 3 mM MnCl2, 50 mM NaCl, 0.05% CHAPS, 1m MAKT DTT and 1 μM ATP. The reactions were carried out at room temperature (RT) for either 30 or 60 minutes (PI3Kα or PI3Kβ, respectively) stopped with 9 μl of Kinase Glo and plates were read 10 minutes later in a Synergy2 reader using an integration time of 0.1 seconds per well. To generate the 100% inhibition of the kinase reaction PI/OG in kinase buffer without addition of recombinant kinases was used while the 0% inhibition was given by the solvent vehicle (90% v/v) DMSO) in water in the presence of recombinant kinases.
\nADAPTA format [2]
\nThe kinase assay format used for measuring the activity on PI3Kγ and PI3Kδ is non-radioactive and monitors the formation of ADP TR-FRET (ADAPTA). Some 50 nl of compound dilutions were dispensed onto white 384-well small volume polystyrene plates. Then, 4.5 μl of PI3K substrate PI followed by 4.5 μl of ATP (final assay volume 9 μL) are incubated at RT. The standard reaction buffer for the Adapta™ TR-FRET assay contained 10 mM Tris-HCl pH 7.5, 3 mM MgCl2, 50 mM NaCl, 1 mM DTT, and 0.05% (v/v) CHAPS. Reactions were stopped with 4.5 μl of a mixture of EDTA containing the Eu-labeled anti-ADP antibody and the Alexa Fluor® 647- labeled ADP tracer in TR-FRET dilution buffer. Plates are read 30 to 60 minutes (PI3Kγ or PI3Kδ, respectively) later in a Synergy2 reader using an integration time of 0.4 seconds and a delay of 0.05 seconds. Control for the 100% inhibition of the kinase reaction was performed by replacing the PI3K by the standard reaction buffer. The control for the 0% inhibition was given by the solvent vehicle of the compounds (90% DMSO in H2O). IC50 values obtained via KinaseGlo and ADAPTA values have been shown to be equivalent/comparable.
\nRadiometric format[2]
\nThe radiometric protein kinase assay (33PanQinase® Activity Assay) was performed in 96-well Flash-PlatesTM from Perkin Elmer (Boston, MA, USA) in a 50 μl reaction volume. The reaction cocktail was pipetted in 4 steps in the following order:
\n• 10 μl of non-radioactive ATP solution (in H2O)
\n• 25 μl of assay buffer/ [γ-33P]-ATP mixture
\n• 5 μl of test sample in 10% DMSO
\n• 10 μl of enzyme/substrate mixture
\nThe assay contained 70 mM HEPES-NaOH pH 7.5, 3 mM MgCl2, 3 mM MnCl2, 3 μM Naorthovanadate, 1.2 mM DTT, 1.0 μM ATP, [γ-33P]-ATP (approx. 8 x 1005 cpm per well), 2.4 nM protein kinase, and 20 μg/ml substrate (casein).
\nAll protein kinases provided by ProQinase were expressed in Sf9 insect cells or in E.coli as recombinant GST-fusion proteins or His-tagged proteins, either as full-length or enzymatically active fragments. All kinases were produced from human cDNAs. Kinases were purified by either GSH-affinity chromatography or immobilized-metal affinity chromatography. Affinity tags were removed from a number of kinases during purification. The purity of the protein kinases was examined by SDS-PAGE/Coomassie staining; the identity was checked by mass spectroscopy. The reaction cocktails were incubated at 30 °C for 60 minutes. The reaction was stopped with 50 μl of 2 % (v/v) H3PO4, plates were aspirated and washed two times with 200 μl 0.9 % (w/v) NaCl. Kinase activity dependent transfer of 33Pi (counting of “cpm”) was determined with a microplate scintillation counter (Microbeta. Wallac). All assays were performed with a BeckmanCoulter Biomek 2000/SL robotic system. For each kinase, the median value of the cpm of three wells with complete reaction cocktails, but without kinase, was defined as \"low control\" (n=3). This value reflects unspecific binding of radioactivity to the plate in the absence of protein kinase but in the presence of the substrate. Additionally, for each kinase the median value of the cpm of three other wells with the complete reaction cocktail, but without any compound, was taken as the \"high control\", i.e. full activity in the absence of any inhibitor (n=3). The difference between high and low control was taken as 100 % activity for each kinase. As part of the data evaluation the low control of each row of a particular plate was subtracted from the high control value as well as from their corresponding 10 \"compound values\". The residual activity (in %) for each well of each row of a particular plate was calculated by using the following formula: Res. Activity (%) = 100 X [(cpm of compound – low control) / (high control – low control)] Since 10 distinct concentrations of each test compound were tested against each kinase, the evaluation of the raw data resulted in 10 values for residual activities per kinase. Based on each 10 corresponding residual activities, IC50 values were calculated using Prism 5.04 for Windows (Graphpad, San Diego, California, USA; www.graphpad.com). The mathematical model used was \"Sigmoidal response (variable slope)“ with parameters \"top“ fixed at 100% and \"bottom\" at 0 %. The in vitro biochemical activity on Vps34 and PI4Kβ were determined using PI as substrate in n-Octyl- Glucoside (OG) luminescence assays based on ATP consumption (KinaseGlo). Inhibitory activity on mTOR was assessed in an antibody-dependent TR-FRET assay to determine the phosphorylation of 4EBP-1 catalyzed by recombinant mTOR. The biochemical activity on DNA-PK was measured by the incorporation of radioactive 33P by DNA-PK into a peptide substrate and was determined by liquid scintillation counting.
Cell Assay
Cellular assays for B and T cell activation in vitro [2]
Mouse B cell activation (CD86 expression) and proliferation after B cell receptor stimulation.[2]
CDZ173 was first dissolved and diluted in DMSO followed by a 1:50 dilution in medium. Splenocytes from Balb/c mice were isolated, re-suspended and transferred to 96 well plates (200 μl/well). The diluted compound or solvent were added to the plates (25 μl) and incubated at 37 °C for 1 hour. Then the cultures were stimulated with 25 μl anti-IgM mAb/well (final concentration 30 μg/ml) for 24 hours at 37 °C and stained with anti-mouse CD86-FITC and anti-mouse CD19-PerCP (2 μl of each antibody/well, both Becton Dickinson). CD86 expression on CD19 positive B cells was quantified by flow cytometry. Based on the reduction of CD86 expression IC50 values were determined. To assess effects on proliferation, murine B cells were stimulated via the B cell receptor by anti-IgM antibody in the presence of titrated amounts of compound and proliferation was assessed by incorporation of radioactive 3H-Thymidine over the last 16 hours of an 88 hour incubation period as described (Julius et al 1984).
Mouse and human mixed lymphocyte reaction (MLR) [2]
The MLR is considered a simple model for allogeneic T cell activation in vitro. For mouse MLR, equal amounts of spleen cells (4 x 105 cells per well) from C57/Bl6 and DBA/2 mice are mixed and incubated with serial dilutions of compound in 200 ml complete RPMI medium in flat bottom tissue culture microtiter plates (Falcon, Becton Dickinson, Basel, Switzerland) at 37oC in 5% CO2. After 4 days, 1 mCi 3H-thymidine (Amersham, UK) was added to each well and incubated for additional 5 hours. Subsequently, cells are harvested with a BetaplateTM 96-well harvester on filter paper and radioactivity measured with a BetaplateTM counter. The degree of inhibition was calculated in percent according to the equation Inhibition [%] = (high control - sample) / high control x 100 and the concentration leading to half-maximal inhibition (IC50 values) was determined.[2]
Human T cell proliferation[2]
The effect of CDZ173 on human T cell proliferation induced by T cell receptor engagement with or without CD28 co-stimulation was measured as described in brief: Flat bottomed 96 well tissue culture plates were coated with either 5 μg/ml anti-CD3 (OKT3) or 5 μg/ml anti-CD3 (OKT3) and 1 μg/ml anti-CD28 (clone 15E8, Novartis) antibody solutions overnight at 2-8°C. Human PBMCs were isolated as described above and were taken up in tissue culture medium at a cell concentration of 2.5x105 cells/ml. PBMCs were then incubated with titrated amounts of CDZ173 at 37°C, 5%CO2 for 1 h. Antibody solution was flicked off the pre-coated 96 well plates, plates were washed 3 times with 200μl/well PBS and PBS was removed. The cell suspension was then plated out (5x104 cells/well) and incubated for 56 hrs at 37°C, 5% CO2. Cells were then pulsed with 1μCi/well 3HThymidine, incubated for an additional 16-20 hrs at 37°C + 5%CO2 and incorporated radioactivity was measured as described above.
Rat-1 fibroblasts were transiently transfected with human PIK3CD cDNA containing APDS-associated mutations (N334K, C416R, E525K, E1021K). Phosphorylated AKT (S473) levels were measured using homogeneous time-resolved fluorescence after treatment with leniolisib or everolimus. [1]
T-cell blasts were generated from isolated T cells from APDS patients and healthy donors by stimulation with anti-CD3 and anti-CD28 antibodies for 3 days. Cells were then incubated with titrated amounts of leniolisib, stimulated with anti-CD3, and phosphorylation of AKT (S473) and S6 (S240/244) was determined by flow cytometry. [1]
Animal Protocol
PK/PD study in rats[2]
Animals[2]
PK/PD experiments were performed with adult male Lewis rats (LEW/Han/Hsd, Charles River, Germany, weighing 225-236 g. Studies were performed according to the Swiss federal law for animal protection and approved by the Veterinary Office Basel (BS No. 425). Animals were housed under conventional hygienic conditions (2 animals /cage, temperature 20-24°C, relative humidity minimum 40%, light/dark cycle 12 hrs) and fed a standard diet (NAFAG 890 25W16) and drinking water ad libitum. They were allowed unrestricted access to food and water before and during the experiment.
A suspension vehicle consisting of 0.5% Tween80 (Fluka 93781) and 0.5% Carboxymethyl-cellulose in Water was used. Suspensions for oral administration were prepared by adding the vehicle to the compound and stirring at RT overnight. All solvents and reagents used were of analytical grade. Compound dosing, PK/PD blood collection CDZ173 was administered p.o. in a volume of 4 ml/kg body weight. For blood collection, animals were anaesthetized with isoflurane using a Fluvac airflow system. Whole blood was collected sublingually 24 hours pre-dose and at 1, 2, 4, 6, 8, 10, 12 and 24 hours post-dose. For pharmacodynamic analysis 100 μl rat blood was collected per time point in Eppendorf tubes with 30 IU sodium heparin (5000 I.U./ml). For pharmacokinetic analysis 150 μl rat blood was collected per time point in EDTA coated Eppendorf tubes.
PK/PD study in monkey[2]
Animals[2]
PK/PD experiments were performed with cynomolgus monkeys all 8-9 years old, weighing 4.4-6.2 kg, captive-bred, from SICONBREC Inc (n=3 non naïve: #5517♀, 5518♀, 5528♂). They showed normal hematology, serum/urine chemistry and were negative for tuberculosis, salmonella/shigella, viral infections (Herpes B, STLV, SIV, SRV type D, Hepatitis B), and ectoand endo-parasites. Animals have access to food and water ad libitum at any time (excepting time in chair and two hours feeding restriction post-dosing) during the course of the study. Each animal is identified by its leg tattoo number or the chest tattoo number assigned by the NHP-team at NIBR-ATI. The bodyweight of the animals was obtained before dosing with test compound. During the 7 hour time course, the monkeys were housed individually in properly marked cages in a room with controlled temperature (22 ± 2ºC) and humidity not less than 40%. Afterwards they returned to the group housing facility housed under natural day-light conditions. They were fed according to the Novartis Standards (Primate Pellets [Kliba Nafag 3446 pellets]), fruits and vegetables) and had free access to water whenever animals were unrestrained. Animal handling, care, drug treatments and blood sampling were performed according to the Swiss Federal Law for animal protection (animal license BS No. 1495).
Drug preparation and administration [2]
CDZ173 was prepared as a suspension one day before dosing the first animal and 2 days before dosing the 2 remaining animals and stored at RT. Some 225.6 mg CDZ173 were dissolved in 42.864 ml 0.5% CMC, 2.256 ml 10% Tween80 in H2O. CDZ173 was administered p.o. at 10 mg/kg body weight. CDZ173 was administered p.o. in a volume of 4 ml/kg body weight. For blood collection, animals were anaesthetized with isoflurane using a Fluvac airflow system. Whole blood was collected from the abdominal aorta using a 10 ml syringe with hypodermic needle pre-coated with sodium heparin. Blood was transferred into 50 ml Falcon tubes and the anticoagulant concentration was adjusted to 100 U/ml final concentrations.
Pharmacokinetic studies[2]
In vivo pharmacokinetic studies in rats[2]
Female wild-type Sprague Dawley rats (Iffa Credo, France) were kept in standard cages and conditions according to Swiss Animal Welfare guidelines (12h light/dark cycles, RT at 22-24 °C, humidity at least 45 % but <70 %) with free access to Ringer solution (glucose 5%, NaCl 0.9% and KCl 0.5%) and pelleted rodent chow. 96-120 hours before administration of the test substance the animals were anesthetized with isoflurane and catheters were surgically implanted under aseptic precautions (use of sterile instruments and surgical material in combination with local antibiotic prophylaxis) into the femoral artery and vein. The catheters were exteriorized in the neck region, connected to a Harvard swivel system (Harvard Instruments) and filled with 0.9% saline containing 100 U·mL-1 heparin. After recovery from anesthesia the animals were housed individually in special cages with free access to food and tap water until and throughout the experiment. Analgesic treatment with Temgesic (10 μg/kg s.c., application volume 1 mL/kg) was performed in the evening following surgery and in the next morning. Compound administration was in the morning (6-8 AM). Blood samples were collected at various time points from the femoral artery catheter into Eppendorf tubes coated with sodium EDTA. Blood samples were immediately frozen at –20 °C until final processing (maximum storage was 8 days). Intravenous and oral dosing was performed in the same animals after a 48 h wash-out interval between the single dose applications. The test substance was administered intravenously as a solution in 1-methyl-2-pyrrolidone and polyethylene glycol 200 (30:70, v/v) at a dose of 1 mg/kg and orally as a homogenous aqueous suspension in Tween 80 and carboxy methyl cellulose sodium 0.5/0.5/99 (w/w) at a dose of 3 mg/kg.
In vivo pharmacokinetic studies in dogs[2]
Adult male beagle dogs (originating from Marshall Farms at Montichiari, Italy) from the permanent MAP/DMPK stock were kept under standard conditions in dog pens according to Swiss Animal Welfare guidelines (standard dog chow once daily, free access to tap water throughout the study). The dogs were fasted 12 h before dosing and then fed 2 h post dose. Compound administration was in the morning (7-8 AM). Intravenous and oral dosing was performed in the same animals. Washout time was one week between applications. The test substance were administered intravenously as a solution in 1-methyl-2- pyrrolidone and polyethylene glycol 200 (15:85, v/v) at a dose of 0.1 mg/kg and orally as a homogenous aqueous suspension in Tween 80 and carboxy methyl cellulose sodium 0.5/0.5/99 (w/w) at a dose of 0.3 mg/kg.
In vivo pharmacokinetic studies in cynomolgus monkeys [2]
Two male and one female adult cynomolgus monkey from the permanent MAP/DMPK stock were kept under standard conditions according to Swiss Animal Welfare guidelines (standard pelleted monkey chow plus fruits in the morning and vegetables in the afternoon, free access to tap water throughout the study). During the single dose experiments up to the 7 h sampling time, the animals were kept singly in experimental cages. Before and after that, the animals were group-housed in large cages, and singled out short-term to take the remaining blood samples. The monkeys were not fasted before dosing and fed 2 h post dose. Compound administration was in a cassette format with application of a mixture of 2 compounds in the morning. Intravenous and oral dosing was performed in the same animals. Washout time was one week between applications. The test substance were administered intravenously as a solution in 1-methyl-2-pyrrolidone and polyethylene glycol 200 (15:85, v/v) at a dose of 0.1 mg/kg and orally as a homogenous aqueous suspension in Tween 80 and carboxy methyl cellulose sodium 0.5/0.5/99.5 (w/w) at a dose of 0.3 mg/kg.
ADME/Pharmacokinetics
Absorption, Distribution and Excretion
Systemic drug exposure (AUC and Cmax) of leniolisib is dose-dependent. With twice-daily administration at approximately 12-hour intervals, the cumulative dose of leniolisib at steady state is approximately 1.4 times the initial value (range 1.0 to 2.2 times). Steady-state drug concentrations are expected to be reached in approximately 2 to 3 days. Tmax is approximately 1 hour. Food has minimal effect on systemic exposure to leniolisib. 168 hours after a single oral dose of 70 mg 14C-leniolisib, the mean total radioactive recovery rate of 14C-leniolisib was 92.5%. Approximately 67% and 25.5% of the recovered dose were found in feces and urine, respectively. Of the drug recovered in urine, 6.32% was in the unchanged parent drug form, which is the major drug-related substance.
Ploniolisiba plasma concentrations exhibit a biexponential decay over time, indicating a delayed distribution to peripheral tissues. The volume of distribution of ploniolisiba in APDS patients is estimated to be 28.5 L.
In one study, healthy volunteers received a single escalation dose to 400 mg of ploniolisiba, followed by multiple escalations to 140 mg twice daily for 14 days. The plasma clearance (CL/F) of the oral drug was 4 L/h.
Metabolism/Metabolites
Approximately 60% of ploniolisiba is metabolized in the liver. Ploniolisiba is primarily metabolized by oxidation, mainly mediated by CYP3A4 (94.5%), with less involvement from CYP3A5 (3.5%), CYP1A2 (0.7%), and CYP2D6 (0.7%). One study characterized several metabolites of ploniolisiba; however, no metabolites were found in high plasma concentrations compared to the parent drug. Other metabolic pathways include dealkylation, demethylation, and hydroxylation. Other possible excretion pathways include BCRP-mediated intestinal secretion and CYP1A1-mediated extrahepatic metabolism. The effective half-life is approximately 7 hours. The apparent terminal elimination half-life is approximately 10 hours. Leoniolisiba is a low-clearance drug with an apparent total clearance (CL/F) of approximately 4.2 L/h. [1] The pharmacokinetics of this drug are linear over a dose range of 10–70 mg twice daily. [1] The time to peak concentration (Tmax) is approximately 1 hour, and the half-life (T1/2) is approximately 5 hours. [1] Steady state is reached 2–3 days after each dose increase. [1]
Toxicity/Toxicokinetics
Hepatotoxicity
In pre-marketing clinical trials of leniolisib in patients with APDS, elevated ALT levels were rare, and there were no reports of adverse liver events or discontinuation due to abnormal liver function. Intermittent elevations of liver enzymes are not uncommon in treatment-naïve APDS patients due to bacteria, viruses, and opportunistic infections. Since leniolisib's approval in the United States, there have been no reported cases of clinically significant liver injury associated with leniolisib treatment, but its clinical use is very limited. Probability Score: E (Unlikely to be the cause of clinically significant liver injury). Pregnancy and Lactation Effects ◉ Overview of Use During Lactation There is currently no information regarding the clinical use of leniolisib during lactation. Because leniolisib binds to plasma proteins at a rate of 94.5%, its levels in breast milk are likely to be low. The manufacturer recommends discontinuing breastfeeding during leniolisib treatment and for one week after the last dose.
◉ Effects on breastfed infants
No relevant published information was found as of the revision date.
◉ Effects on lactation and breast milk
No relevant published information was found as of the revision date.
Protein binding
Leniolisib was bound to plasma proteins in 94.5%.
Leniolisib was well tolerated for 12 weeks in 6 patients with APDS. No significant granulocytopenia, hypertriglyceridemia, hyperglycemia, gastrointestinal disturbances, rash, or hepatotoxicity were observed. [1]
No dose-limiting adverse events were reported. [1]
No significant adverse events were observed with long-term use (more than 9 months in the extended study). [1]
Previous reports have indicated that PI3Kδ inhibition may lead to genomic instability, but this was not evaluated in this trial. [1]
References

[1]. Effective 'Activated PI3Kd Syndrome' -targeted therapy with PI3Kd inhibitor leniolisib. The New England journal of medicine: NEJM. ISSN 0028-4793; 1533-4406

[2]. Hoegenauer K, et al. Discovery of CDZ173 (Leniolisib), Representing a Structurally Novel Class of PI3K Delta-Selective Inhibitors. ACS Med Chem Lett. 2017 Aug 25;8(9):975-980.
Additional Infomation
Leniolisib is a pyridopyrimidine compound with the structure 5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine, substituted at positions 4 and 6 with [(3S)-1-propionylpyrrolidine-3-yl]amino and 6-methoxy-5-(trifluoromethyl)pyridinidine-3-yl, respectively. It is an EC 2.7.1.153 (phosphatidylinositol-4,5-bisphosphate 3-kinase) inhibitor and immunomodulator. It is an aromatic ether, pyridine compound, organofluorine compound, pyridopyrimidine compound, secondary amino compound, pyrrolidine compound, and tertiary amide compound. Leniolisib is a potent and selective inhibitor of phosphatidylinositol 3-kinase δ (PI3Kδ). On March 24, 2023, the U.S. Food and Drug Administration (FDA) approved leniolisib for marketing, making it the first drug for the treatment of activated phosphatidylinositol 3-kinase delta syndrome (APDS). APDS is a primary immunodeficiency disease caused by mutations in the gene encoding PI3Kδ, leading to enhanced PI3Kδ activity, resulting in immune dysfunction and increased susceptibility to infection. Leniolisib's mechanism of action is to inhibit overactive PI3Kδ. Currently, studies are underway to investigate leniolisib for the treatment of primary Sjögren's syndrome. Leniolisib is a kinase inhibitor. Its mechanism of action is as an inhibitor of phosphatidylinositol 3-kinase delta, cytochrome P450 1A2, breast cancer resistance protein, organic anion transport peptide 1B1, and organic anion transport peptide 1B3.
Leniolisib is an oral kinase inhibitor used to treat adults and children aged 12 years and older with activated phosphatidylinositol-3-kinase delta syndrome (APDS). APDS is an extremely rare inherited immunodeficiency disorder. Clinical use of leioniolisib is very limited, but there are no reports of it causing elevated liver enzymes or being associated with clinically significant liver injury events.
See also: leioniolisib phosphate (active ingredient).
Drug Indications
Leniolisib is indicated for the treatment of activated phosphatidylinositol 3-kinase delta (PI3Kδ) syndrome (APDS) in adults and children aged 12 years and older.
Treatment of Activated Phosphatidylinositol 3-kinase delta syndrome (APDS)Mechanism of Action
Phosphatidylinositol 3-kinase delta (PI3Kδ) is a lipid kinase that is activated downstream of tyrosine kinase receptors and G protein-coupled receptors in immune cells.
It mediates the PI3K/AKT pathway, which is involved in cell proliferation, growth, and survival. PI3Kδ is a heterodimer composed of a regulatory subunit (p85α) and a catalytic subunit (p110δ), primarily expressed in hematopoietic cells, such as lymphocytes and myeloid cells. It converts phosphatidylinositol-4,5-bisphosphate (PIP2) to phosphatidylinositol-3,4,5-triphosphate (PIP3), a signaling molecule that activates downstream proteins, such as AKT kinase, which in turn activates mammalian target of rapamycin (mTOR) complex I and inhibits FOXO family transcription factors. APDS is associated with gain-of-function variants encoding the p110δ gene or loss-of-function variants encoding the p85α gene; both types of variants lead to PI3Kδ overactivation, decreased T cell function, lymphadenopathy, and immunodeficiency. Leniolisib inhibits PI3Kδ by blocking the active binding site on the p110δ subunit. In cell-free enzyme activity assays, Leniolisib showed greater selectivity for PI3K-δ than PI3K-α (28-fold), PI3K-β (43-fold), and PI3K-γ (257-fold), and also beyond the broader kinase group. In cell-based assays, Leniolisib reduced pAKT pathway activity and inhibited the proliferation and activation of B cell and T cell subsets. Leniolisib inhibition led to increased PIP3 production, overactivation of the downstream mTOR/AKT pathway, and dysfunction of signaling pathways in B and T cells.
Pharmacodynamics
Leniolisib exerts its effects by blocking abnormal PI3Kδ-dependent signaling pathways in immune cells such as B cells, T cells, neutrophils, monocytes, basophils, plasmacytoid dendritic cells, and mast cells.
In vitro studies demonstrated that leniolisib dose-dependently inhibited PI3Kδ pathway overactivation in cell lines overexpressing the p110δ mutant and in primary immune cells from APDS patients. In APDS patients, the ex vivo pharmacodynamics of leniolisib in the proportion of phosphorylated Akt (pAkt)-positive B cells was evaluated by dosing 10, 30, and 70 mg twice daily for four weeks. Within the studied dose range, higher leniolisib plasma concentrations were generally associated with a more significant reduction in pAkt-positive B cells. Higher doses were associated with slightly higher peak values and more durable reductions. Treatment with leniolisib twice daily at 70 mg reached a steady state and was expected to result in an average reduction of approximately 80% in pAkt-positive B cells. Leniolisib (CDZ173) is a selective oral PI3Kδ inhibitor for the treatment of activated PI3Kδ syndrome (APDS), a primary immunodeficiency disease caused by gain-of-function mutations in PIK3CD. [1]
It can inhibit the overactive PI3Kδ signaling pathway, thereby reducing lymphocyte proliferation, restoring immune cell subsets to normal, and lowering inflammatory marker levels. [1]
The recommended optimal therapeutic dose is 70 mg twice daily. [1]
At the time of publication, a randomized, placebo-controlled trial was underway (NCT02435173). [1]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C21H25F3N6O2
Molecular Weight
450.47
Exact Mass
450.199
Elemental Analysis
C, 55.99; H, 5.59; F, 12.65; N, 18.66; O, 7.10
CAS #
1354690-24-6
Related CAS #
Leniolisib phosphate;1354691-97-6
PubChem CID
57495353
Appearance
White to off-white solid powder
LogP
2.96
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
10
Rotatable Bond Count
5
Heavy Atom Count
32
Complexity
654
Defined Atom Stereocenter Count
1
SMILES
FC(C1=C(N=C([H])C(=C1[H])N1C([H])([H])C([H])([H])C2=C(C1([H])[H])C(=NC([H])=N2)N([H])[C@]1([H])C([H])([H])N(C(C([H])([H])C([H])([H])[H])=O)C([H])([H])C1([H])[H])OC([H])([H])[H])(F)F
InChi Key
MWKYMZXCGYXLPL-ZDUSSCGKSA-N
InChi Code
InChI=1S/C21H25F3N6O2/c1-3-18(31)30-6-4-13(10-30)28-19-15-11-29(7-5-17(15)26-12-27-19)14-8-16(21(22,23)24)20(32-2)25-9-14/h8-9,12-13H,3-7,10-11H2,1-2H3,(H,26,27,28)/t13-/m0/s1
Chemical Name
(S)-1-(3-((6-(6-methoxy-5-(trifluoromethyl)pyridin-3-yl)-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4-yl)amino)pyrrolidin-1-yl)propan-1-one
Synonyms
CDZ-173; Joenja; CDZ 173; CDZ173
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ≥ 150 mg/mL
Water: <1 mg/mL
Ethanol: ≥ 10 mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (5.55 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (5.55 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (5.55 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.2199 mL 11.0995 mL 22.1990 mL
5 mM 0.4440 mL 2.2199 mL 4.4398 mL
10 mM 0.2220 mL 1.1100 mL 2.2199 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Status Interventions Conditions Sponsor/Collaborators Start Date Phases
NCT05693129 Not yet recruiting Drug: Leniolisib APDS Pharming Technologies B.V. August 30, 2023 Phase 3
NCT05438407 Rrecruiting Drug: Leniolisib APDS Pharming Technologies B.V. February 1, 2023 Phase 3
Biological Data
  • LENIOLISIB

    Effective “activated PI3Kδ syndrome”–targeted therapy with the PI3Kδ inhibitor leniolisib.2017 Nov 23;130(21):2307-2316.

  • LENIOLISIB

    PIK3CDmutant transfectants treated with leniolisib or an mTOR inhibitor.2017 Nov 23;130(21):2307-2316.

  • LENIOLISIB

    T-cell blast activation in presence or absence of leniolisib.2017 Nov 23;130(21):2307-2316.

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