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Lenalidomide-OH

Alias: LenalidomideOH Lenalidomide OH
Cat No.:V40200 Purity: ≥98%
Lenalidomide-OH, a hydroxylated analog of Lenalidomide which is a cereblon (CRBN) ligand usedfor E3 ubiquitin ligase, can be used as a E3 ligase ligand in PROTACs for the recruitment of CRBN protein.
Lenalidomide-OH
Lenalidomide-OH Chemical Structure CAS No.: 1416990-08-3
Product category: Ligands for E3 Ligase
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
250mg
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Product Description
Lenalidomide-OH, a hydroxylated analog of Lenalidomide which is a cereblon (CRBN) ligand used for E3 ubiquitin ligase, can be used as a E3 ligase ligand in PROTACs for the recruitment of CRBN protein. Specifically, Lenalidomide-OH can be connected via a linker to the warhead in PROTACs that target a protein for degradation. Lenalidomide (also known as Revlimid, CC-5013) is a derivative of thalidomide approved in the United States in 2005 for the treatment for myeloma and blood disorders called myelodysplastic syndromes.
Lenalidomide-OH (3-(5-hydroxy-1-oxo-2,3-dihydro-1H-isoindol-2-yl)piperidine-2,6-dione) is a hydroxylated analog of the immunomodulatory drug Lenalidomide. It is a cereblon (CRBN) ligand for E3 ubiquitin ligase and is used in the recruitment of CRBN protein in PROTAC technology. It has a molecular weight of 260.24 g/mol and a molecular formula of C13H12N2O4.
Biological Activity I Assay Protocols (From Reference)
Targets
Lenalidomide-OH targets cereblon (CRBN), a component of the E3 ubiquitin ligase complex. As a CRBN ligand, it recruits the E3 ligase to target proteins that are bound to the other end of a PROTAC molecule. By bringing the target protein into proximity with the E3 ligase, it induces ubiquitination and subsequent proteasomal degradation of the target protein.
ln Vitro
PROTACs can be created by joining lentidomide-OH and the protein ligand via a linker. Cancer-promoting proteins are degraded by ubiquitination, which is induced by PROTACs[1].
In vitro, Lenalidomide-OH is characterized by its ability to bind to cereblon (CRBN) and function as an E3 ligase ligand in PROTAC molecules. It is a hydroxylated analog of Lenalidomide. The compound's utility as a CRBN ligand makes it a valuable building block for PROTAC research.
ln Vivo
In vivo, Lenalidomide-OH is used as a building block for the synthesis of PROTAC molecules that can induce targeted protein degradation. The PROTACs incorporating this ligand can be administered to animal models to study the effects of degrading specific target proteins. Its in vivo activity is realized through the PROTAC molecules synthesized using this compound.
Enzyme Assay
In vitro assays for Lenalidomide-OH typically involve binding studies with cereblon (CRBN). Recombinant CRBN protein is incubated with increasing concentrations of the compound in binding buffer. Binding affinity is measured using surface plasmon resonance (SPR), isothermal titration calorimetry (ITC), or fluorescence polarization. The compound's ability to recruit CRBN can be assessed in ternary complex formation assays.
Cell Assay
For in vitro cell-based assays, Lenalidomide-OH is used in the synthesis of PROTAC molecules. Cells expressing the target protein are treated with the PROTAC. Target protein degradation is confirmed by Western blot. Cell viability is assessed by MTT or CellTiter-Glo assays. The compound's effects on downstream signaling pathways are analyzed by Western blot or qRT-PCR.
Animal Protocol
In vivo animal studies with Lenalidomide-OH are conducted using PROTAC molecules synthesized from this compound. The PROTAC is administered orally or intraperitoneally to rodents. Target protein degradation in tissues is confirmed by Western blot. Pharmacodynamic effects are assessed by measuring downstream signaling and biological responses. Blood samples are collected for pharmacokinetic analysis.
ADME/Pharmacokinetics
Lenalidomide-OH (CAS: 1416990-08-3) has a molecular weight of 260.24 g/mol and a molecular formula of C13H12N2O4. Chemical name: 3-(5-hydroxy-1-oxo-2,3-dihydro-1H-isoindol-2-yl)piperidine-2,6-dione. Appearance: solid powder. Purity: ≥95%. Storage: -20°C. The compound is a cereblon (CRBN) ligand for E3 ubiquitin ligase.
Toxicity/Toxicokinetics
Lenalidomide-OH is a research compound and is not approved for human therapeutic use. As a Lenalidomide analog, it may have similar toxicity concerns, including teratogenic effects. The compound is used in very small quantities as a research reagent. Standard laboratory safety precautions should be followed when handling the compound.
References

[1]. Design, synthesis and biological evaluation of Proteolysis Targeting Chimeras (PROTACs) as a BTK degraders with improved pharmacokinetic properties. 2020 Feb 1;30(3):126877.

Additional Infomation
Lenalidomide-OH is a hydroxylated analog of Lenalidomide and a cereblon (CRBN) ligand for E3 ubiquitin ligase. It is used in the recruitment of CRBN protein in PROTAC technology. It has a molecular weight of 260.24 g/mol and a molecular formula of C13H12N2O4. It is not FDA-approved and is intended for research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C13H12N2O4
Molecular Weight
260.245383262634
Exact Mass
260.079
CAS #
1416990-08-3
PubChem CID
71517902
Appearance
Off-white to gray solid powder
LogP
-0.2
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
1
Heavy Atom Count
19
Complexity
436
Defined Atom Stereocenter Count
0
SMILES
O=C1C2C=CC(=CC=2CN1C1C(NC(CC1)=O)=O)O
InChi Key
JJUMFQGCQAUIFH-UHFFFAOYSA-N
InChi Code
InChI=1S/C13H12N2O4/c16-8-1-2-9-7(5-8)6-15(13(9)19)10-3-4-11(17)14-12(10)18/h1-2,5,10,16H,3-4,6H2,(H,14,17,18)
Chemical Name
3-(6-hydroxy-3-oxo-1H-isoindol-2-yl)piperidine-2,6-dione
Synonyms
LenalidomideOH Lenalidomide OH
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~13.89 mg/mL (~53.37 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (7.99 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (7.99 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.08 mg/mL (7.99 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.8425 mL 19.2123 mL 38.4246 mL
5 mM 0.7685 mL 3.8425 mL 7.6849 mL
10 mM 0.3842 mL 1.9212 mL 3.8425 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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