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K-Ras inhibitor 12

Alias: K-Ras(G12C) inhibitor 12; K-Ras(G12C) inhibitor
Cat No.:V1570 Purity: ≥98%
K-Ras(G12C) inhibitor 12 is a co-valent and allosteric inhibitor of K-Ras G12C with potential antitumor activity.
K-Ras inhibitor 12
K-Ras inhibitor 12 Chemical Structure CAS No.: 1469337-95-8
Product category: Rho
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

K-Ras(G12C) inhibitor 12 is a co-valent and allosteric inhibitor of K-Ras G12C with potential antitumor activity. The mutated, oncogenic form of K-ras is known as KRAS G12C. K-Ras(G12C) inhibitor 12 functions by attaching itself to K-Ras(G12C) and joining forces with KRAS's 12C cysteine to form a covalent bond.


12 (acrylamide analogue) is an irreversible, mutant-selective small-molecule inhibitor targeting K-Ras(G12C). It binds covalently to the mutant cysteine (Cys12) at the switch-II pocket (S-IIP), a previously unknown allosteric site. Binding of 12 disrupts both switch-I and switch-II regions, shifts the nucleotide preference of K‑Ras from GTP to GDP, impairs SOS‑catalysed nucleotide exchange, and reduces interaction with effector proteins such as Raf. The compound shows genotype‑specific activity in K‑Ras(G12C)-driven cancer cell lines. [1]
Biological Activity I Assay Protocols (From Reference)
Targets
K-Ras(G12C)
12 targets the oncogenic mutant K‑Ras(G12C). No IC₅₀, Kᵢ, or EC₅₀ values for direct target binding are reported. [1]
ln Vitro
K-Ras(G12C) inhibitor 12 is a member of a class of small molecules that binds to the common oncogenic mutant K-Ras(G12C) in an irreversible manner, preventing K-Ras(G12C) interactions. Some of them cause G12C-containing cancer cell lines to become less viable and more susceptible to apoptosis.[1]
12 achieves 100% adduct formation on K‑Ras(G12C) after 24 h incubation with 10 μM compound (Fig. 2b).
ln Vivo


Enzyme Assay
Nucleotide affinity assay (GDP/GTP competition):
Cell Assay
K-Ras(G12C) inhibitor 12, an extremely potent Ras inhibitor, has an EC50 value of 0.32 μM in H1792 cells.It does not interfere with the activity of wild-type Ras; instead, it irreversibly binds to an oncogenic mutant K-Ras(G12C). K-Ras(G12C)-mutant cells show higher apoptosis and decreased viability after treatment with K-Ras(G12C) inhibitor 12 in comparison to cells without this mutation.
Cells are plated in 96‑well plates at 2,000 cells per well in 90 μL DMEM with 10% FBS and allowed to attach for 24 h. Cells are treated by adding 10 μL of 12 (100 μM or half‑log dilutions) or vehicle (0.1% DMSO final). After 72 h, the medium is exchanged and plates are analysed using a luminescent cell viability assay (CellTiter‑Glo). [1]
Animal Protocol



References

[1]. K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions. Nature. 2013 Nov 28;503(7477):548-551.

Additional Infomation
12 is an acrylamide‑based irreversible inhibitor that binds covalently to Cys12 of K‑Ras(G12C) at the switch‑II pocket (S‑IIP). This pocket is not visible in previously published Ras structures and is formed upon compound binding. 12 binding displaces switch‑II and partially disorders switch‑I, leading to loss of magnesium ion coordination and altered nucleotide affinity. The compound impairs both SOS‑catalysed nucleotide exchange and effector (Raf) binding. It demonstrates allele‑specific activity in K‑Ras(G12C)-driven lung cancer cell lines, reducing viability and inducing apoptosis. The mechanism involves shifting the nucleotide preference toward GDP and disrupting the active conformation required for effector interaction. [1]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C15H17CLIN3O3
Molecular Weight
449.67
Exact Mass
449
Elemental Analysis
C, 40.07; H, 3.81; Cl, 7.88; I, 28.22; N, 9.34; O, 10.67
CAS #
1469337-95-8
Related CAS #
1469337-95-8
PubChem CID
73555129
Appearance
Off-white to light yellow solid powder
Density
1.736±0.06 g/cm3
Boiling Point
680.2±55.0 °C at 760 mmHg
Flash Point
365.2±31.5 °C
Vapour Pressure
0.0±2.2 mmHg at 25°C
Index of Refraction
1.674
LogP
2.84
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
4
Heavy Atom Count
23
Complexity
457
Defined Atom Stereocenter Count
0
SMILES
C=CC(N1CCN(C(CNC2=CC(I)=C(Cl)C=C2O)=O)CC1)=O
InChi Key
JFIFBWVNHLXJFY-UHFFFAOYSA-N
InChi Code
InChI=1S/C15H17ClIN3O3/c1-2-14(22)19-3-5-20(6-4-19)15(23)9-18-12-8-11(17)10(16)7-13(12)21/h2,7-8,18,21H,1,3-6,9H2
Chemical Name
1-[4-[2-(4-chloro-2-hydroxy-5-iodoanilino)acetyl]piperazin-1-yl]prop-2-en-1-one
Synonyms
K-Ras(G12C) inhibitor 12; K-Ras(G12C) inhibitor
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ~27 mg/mL (~60.0 mM)
Water: <1 mg/mL
Ethanol: <1 mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 1.67 mg/mL (3.71 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 16.7 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 1.67 mg/mL (3.71 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 16.7 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.2239 mL 11.1193 mL 22.2385 mL
5 mM 0.4448 mL 2.2239 mL 4.4477 mL
10 mM 0.2224 mL 1.1119 mL 2.2239 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • K-Ras(G12C) inhibitor 12

    Inhibitor sensitivity, K-Ras GTP levels and K-Ras dependency of lung cancer cell lines.Nature. 2013 Nov 28;503(7477):548-51.
  • K-Ras(G12C) inhibitor 12

    Tethering compounds selectively bind to oncogenic K-Ras(G12C). Nature. 2013 Nov 28;503(7477):548-51.
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