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Jaspamycin

Cat No.:V31529 Purity: ≥98%
Jaspamycin(7-CN-7-C-Ino) is a naturally occuring metaboliteisolated from the marine sponge Jaspis splendens with anti-parasiteactivity.
Jaspamycin
Jaspamycin Chemical Structure CAS No.: 22242-96-2
Product category: PKA
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
25mg
50mg
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Product Description
Jaspamycin (7-CN-7-C-Ino) is a naturally occuring metabolite isolated from the marine sponge Jaspis splendens with anti-parasite activity. It is a potent activator of PKA (EC50 = 6.5 nM and Kd o= 8 nM).


Jaspamycin (also known as 7-CN-7-C-Ino) is a naturally occurring metabolite isolated from the marine sponge Jaspis splendens with anti-parasite activity. With a molecular formula of C12H12N4O₅ and a molecular weight of 292.25, it is a potent activator of protein kinase A (PKA), binding to the R site (PKAR). It has an EC₅0 of 6.5 nM and a Kd of 8 nM in Trypanosoma brucei.
Biological Activity I Assay Protocols (From Reference)
Targets
Jaspamycin targets protein kinase A (PKA), a key enzyme in cAMP signaling that regulates various cellular processes including metabolism, gene expression, and cell growth. It binds to the R site of PKA (PKAR) and acts as a potent activator. The compound also exhibits antimicrobial, antiviral, and anticancer activities by inhibiting RNA synthesis through incorporation into RNA molecules. Its anti-parasite activity is particularly notable.
ln Vitro
In vitro, Jaspamycin is a potent activator of PKA with an EC₅0 of 6.5 nM and a Kd of 8 nM in Trypanosoma brucei. It exhibits antimicrobial, antiviral, and anticancer activities by inhibiting RNA synthesis through incorporation into RNA molecules, disrupting proper transcription processes. Its anti-parasite activity makes it a valuable tool for studying parasite biology and developing anti-parasitic therapies.
ln Vivo
In vivo studies of Jaspamycin are focused on evaluating its anti-parasite efficacy in animal models of parasitic infections. As a potent PKA activator with anti-parasite activity, the compound may have potential for treating parasitic diseases. Further in vivo studies are needed to fully characterize its efficacy, safety, and pharmacokinetic profile.
Enzyme Assay
For in vitro binding assays, Jaspamycin can be evaluated using PKA binding assays to measure its affinity for the R site of PKA. The compound is incubated with recombinant PKA regulatory subunit at various concentrations. Binding affinity (Kd) is determined using surface plasmon resonance (SPR), isothermal titration calorimetry (ITC), or fluorescence polarization assays. Functional activity as a PKA activator is assessed using kinase activity assays.
Cell Assay
For in vitro cellular experiments, Jaspamycin is tested in parasite cell lines or mammalian cell lines to evaluate its effects on PKA activity and cell growth. Cells are cultured in appropriate media and treated with various concentrations of the compound. PKA activity is assessed by measuring phosphorylation of PKA substrates using Western blotting. Cell viability and proliferation are assessed using standard assays. The compound's effects on RNA synthesis can be evaluated using incorporation of labeled nucleotides.
Animal Protocol
For in vivo animal experiments, Jaspamycin can be administered to animals via various routes including oral gavage, intravenous injection, or intraperitoneal injection. The compound's anti-parasite efficacy can be evaluated in animal models of parasitic infections. Typical doses may range from 1 to 50 mg/kg. Parasite load, survival, and inflammatory markers are assessed. Pharmacodynamic markers such as PKA activity are measured in tissues.
ADME/Pharmacokinetics
Pharmacokinetic properties of Jaspamycin are not extensively characterized in the literature. As a small molecule with a molecular weight of 292.25, it may have reasonable bioavailability and tissue distribution. The compound is a natural product and nucleoside antibiotic. Detailed parameters such as Cₘₐₓ, Tₘₐₓ, AUC, half-life, and clearance would need to be determined through comprehensive PK studies.
Toxicity/Toxicokinetics
Toxicological data for Jaspamycin are limited, as it is primarily a research tool. As a nucleoside antibiotic that inhibits RNA synthesis, its toxicity would depend on its selectivity for parasite versus host cells. Comprehensive toxicology studies including acute and repeated-dose toxicity, genotoxicity, and cardiotoxicity assessments would be needed for further development. Appropriate safety precautions should be taken when handling this compound.
References

[1]. Nucleoside analogue activators of cyclic AMP-independent protein kinase A of Trypanosoma. Nat Commun. 2019 Mar 29;10(1):1421.

Additional Infomation
Jaspamycin is a research compound used to study PKA biology and develop anti-parasitic therapies. No clinical trials or regulatory approvals have been reported for this compound as a therapeutic agent. It is available from various chemical suppliers for research purposes only. The compound is a naturally occurring metabolite from the marine sponge Jaspis splendens with anti-parasite activity and is a potent PKA activator.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C12H12N4O5
Molecular Weight
292.2475
Exact Mass
292.081
CAS #
22242-96-2
PubChem CID
136670059
Appearance
Light yellow to yellow solid powder
Density
1.91g/cm3
Boiling Point
724.3ºC at 760 mmHg
Flash Point
391.8ºC
Vapour Pressure
5.1E-22mmHg at 25°C
Index of Refraction
1.827
LogP
-2.1
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
2
Heavy Atom Count
21
Complexity
517
Defined Atom Stereocenter Count
4
SMILES
C1=C(C2=C(N1[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)N=CNC2=O)C#N
InChi Key
SKDKFLFSBDYEDO-WOUKDFQISA-N
InChi Code
InChI=1S/C12H12N4O5/c13-1-5-2-16(10-7(5)11(20)15-4-14-10)12-9(19)8(18)6(3-17)21-12/h2,4,6,8-9,12,17-19H,3H2,(H,14,15,20)/t6-,8-,9-,12-/m1/s1
Chemical Name
7-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-4-oxo-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~41.67 mg/mL (~142.58 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (7.12 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (7.12 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.08 mg/mL (7.12 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.4217 mL 17.1086 mL 34.2173 mL
5 mM 0.6843 mL 3.4217 mL 6.8435 mL
10 mM 0.3422 mL 1.7109 mL 3.4217 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
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  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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