Indibulin

Alias: ZIO-301; ZINC01996564; ZERO/005632; D-24851; d-24851; NCGC00160428-01
Cat No.:V22543 Purity: ≥98%
Indibulin is a synthetic small molecule with antimitotic and potential antineoplastic activities.
Indibulin Chemical Structure CAS No.: 204205-90-3
Product category: Microtubule(Tubulin)
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

Indibulin is a synthetic small molecule with antimitotic and potential antineoplastic activities. Indibulin destabilizes tubulin polymerization and induces tumor cell cycle arrest and apoptosis by binding to a site on tubulin that is distinct from taxane- or Vinca alkaloid-binding sites. It has been demonstrated that this substance is effective against tumor cell lines that are taxane- and multidrug-resistant (MDR). Use this agent to look up any closed or ongoing clinical trials. (Thesaurus NCI).

Biological Activity I Assay Protocols (From Reference)
Targets
Tubulin
ln Vitro
Indibulin (300-2100 nM; 48 hours) has an IC50 of 150 nM, which inhibits the growth of MCF-7 cells.
Indibulin (300, 600 nM; 48 hours) inhibits G2/M phase cells, suggesting that it prevents the cell cycle from progressing during mitosis[1].
Indibulin (150-600 nM; 24 hours) causes MCF-7 cells to undergo apoptosis[1].
When Indibulin (150-600 nM; 48 hours) at concentrations of 300 and 600 nM is used to treat MCF-7 cells, it produces cleaved fragments of the PARP protein[1].
Cell Assay
Cell Line: MCF-7 cells
Concentration: 300, 600, 900, 1200, 1500, 1800, 2100 nM
Incubation Time: 48 hours
Result: Inhibited the proliferation of MCF-7 cells with an IC50 of 150 nM.
References

[1]. Indibulin dampens microtubule dynamics and produces synergistic antiproliferative effect with vinblastine in MCF-7 cells: Implications in cancer chemotherapy. Sci Rep. 2018 Aug 17;8(1):12363.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C22H16CLN3O2
Molecular Weight
389.83
Exact Mass
389.0931
Elemental Analysis
C, 67.78; H, 4.14; Cl, 9.09; N, 10.78; O, 8.21
CAS #
204205-90-3
Related CAS #
204205-90-3
Appearance
Solid powder
SMILES
C1=CC=C2C(=C1)C(=CN2CC3=CC=C(C=C3)Cl)C(=O)C(=O)NC4=CC=NC=C4
InChi Key
SOLIIYNRSAWTSQ-UHFFFAOYSA-N
InChi Code
InChI=1S/C22H16ClN3O2/c23-16-7-5-15(6-8-16)13-26-14-19(18-3-1-2-4-20(18)26)21(27)22(28)25-17-9-11-24-12-10-17/h1-12,14H,13H2,(H,24,25,28)
Chemical Name
2-[1-[(4-chlorophenyl)methyl]indol-3-yl]-2-oxo-N-pyridin-4-ylacetamide
Synonyms
ZIO-301; ZINC01996564; ZERO/005632; D-24851; d-24851; NCGC00160428-01
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 40~50 mg/mL (102.6~128.3 mM)
Solubility (In Vivo)
Solubility in Formulation 1: 2.08 mg/mL (5.34 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (5.34 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.5652 mL 12.8261 mL 25.6522 mL
5 mM 0.5130 mL 2.5652 mL 5.1304 mL
10 mM 0.2565 mL 1.2826 mL 2.5652 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT00591890 Completed Drug: indibulin Advanced Cancer Alaunos Therapeutics October 2007 Phase 1
NCT00591136 Completed Drug: indibulin Solid Tumors Alaunos Therapeutics April 2003 Phase 1
Biological Data
  • Indibulin inhibited the proliferation of MCF-7 cells and blocked the cell cycle progression at mitosis: (A) Structure of indibulin. Sci Rep. 2018 Aug 17;8(1):12363.
  • Effects of indibulin on interphase microtubules in MCF-7 cells: (A) Cells were incubated with vehicle or different concentrations of indibulin for 24 h and were then stained with an antibody against α-tubulin (red). Sci Rep. 2018 Aug 17;8(1):12363.
  • Indibulin increased the level of Mad2 and BubR1 and activated apoptosis in MCF-7 cells: (A) MCF-7 cells were incubated without and with different concentrations of indibulin and the cell extract was prepared. Sci Rep. 2018 Aug 17;8(1):12363.
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