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HPOB

Alias: HPOB
Cat No.:V0265 Purity: ≥98%
HPOB is a novel, potent and selective inhibitor of histone deacetylase 6 (HDAC6) inhibitor with potential anticancer activity.
HPOB
HPOB Chemical Structure CAS No.: 1429651-50-2
Product category: HDAC
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

HPOB is a novel, potent and selective inhibitor of histone deacetylase 6 (HDAC6) with potential anticancer activity. It exhibits >30-fold selectivity for HDAC6 over other HDAC isoforms and inhibits HDAC6 with an IC50 of 56 nM.

Biological Activity I Assay Protocols (From Reference)
Targets
HDAC6 ( IC50 = 0.056 μM ); HDAC3/NCOR2 ( IC50 = 1.7 μM ); HDAC8 ( IC50 = 2.8 μM ); HDAC1 ( IC50 = 2.9 μM ); HDAC10 ( IC50 = 3.0 μM ); HDAC2 ( IC50 = 4.4 μM )
ln Vitro

HPOB (8, 16, or 32 μM; 72 hours) inhibits the growth of normal or transformed cells, but not their viability[1].
HPOB causes acetylated α-tubulin and acetylated peroxiredoxin, substrates of HDAC6, to accumulate in both normal (HFS) and transformed (LNCAP, U87, and A549) cells, but not acetylated histones. HPOB increases the death of transformed cells (LNCAP, U87, and A549 cells) induced by etoposide, doxorubicin, and SAHA, but not normal cell death[1].
Clever PARP (a sign of apoptosis) was found to be upregulated in LNCaP cells treated with HPOB and etoposide as well. The accumulation of γH2AX in LNCaP cells was indicative of increased DNA damage accumulation when HPOB and etoposide were combined, as opposed to when etoposide was used alone[1].
HPOB reduces the damage caused by corticosterone in rat adrenal pheochromocytoma PC12 cells by blocking the intrinsic apoptotic pathway and mitochondrial GR translocation[2].

ln Vivo
HPOB (300 mg/kg; i.p.; daily for 18 days) and SAHA (50 mg/kg) inhibits the development of CWR22 tumors that have already grown[1].
Enzyme Assay
The fluorogenic release of 7-amino-4-methylcoumarin from substrate upon deacetylase enzymatic activity is used to detect the in vitro activities of the 11 recombinant human zinc-dependent HDAC enzymes. Ten percent DMSO in HDAC assay buffer is used to prepare a series of dilutions of the unique HDAC6 compound, tubacin, and SAHA. Five microliters of each dilution is then added to a 50 microliter reaction, ensuring that the final concentration of DMSO is one percent in each reaction. The enzymatic reactions are carried out in duplicate in a 50-μL mixture containing an HDAC substrate, an HDAC enzyme, an HDAC assay buffer, 5 μg BSA, and a test compound for 30 minutes at 37 °C. Following the enzymatic reactions, 50 μL of 2× HDAC developer is added to every well, and the plate is left to incubate for a further fifteen minutes at room temperature. A Synergy microplate reader is used to measure the fluorescence intensity at an excitation of 360 nm and an emission of 460 nm. The assays include positive controls (SAHA, a known HDAC inhibitor) and negative controls (no enzyme, no inhibitor, or medication with no HDAC inhibition activity). The drug concentration that causes a 50% decrease in HDAC activity when compared to the control is known as the IC50.
Cell Assay
The prescribed doses of HPOB are cultivated in normal (HFS) and transformed (LNCaP, A549, and U87) cells for a duration of 72 hours. A positive control is five micromolars of SAHA. Prism 5 was utilized to construct the graphs.
Animal Protocol
Dissolved in DMSO; 300 mg/kg daily; i.p. injection.
Mice bearing CWR22 human prostate cancer xenografts
References

[1]. Proc Natl Acad Sci U S A . 2013 Sep 24;110(39):15704-9.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C17H18N2O4
Molecular Weight
314.34
Exact Mass
314.126
Elemental Analysis
C, 64.96; H, 5.77; N, 8.91; O, 20.36
CAS #
1429651-50-2
Related CAS #
1429651-50-2
PubChem CID
71532921
Appearance
Off-white to pink solid powder
Density
1.3±0.1 g/cm3
Index of Refraction
1.649
LogP
-0.05
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
6
Heavy Atom Count
23
Complexity
388
Defined Atom Stereocenter Count
0
SMILES
O=C(N(CCO)C1=CC=CC=C1)CC2=CC=C(C(NO)=O)C=C2
InChi Key
RFAZNTABYJYOAR-UHFFFAOYSA-N
InChi Code
InChI=1S/C17H18N2O4/c20-11-10-19(15-4-2-1-3-5-15)16(21)12-13-6-8-14(9-7-13)17(22)18-23/h1-9,20,23H,10-12H2,(H,18,22)
Chemical Name
N-hydroxy-4-[2-[N-(2-hydroxyethyl)anilino]-2-oxoethyl]benzamide
Synonyms
HPOB
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 50~62 mg/mL (159.1~197.2 mM)
Water: <1 mg/mL
Ethanol: ~38 mg/mL warmed (120.9mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (7.95 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (7.95 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (7.95 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.1813 mL 15.9063 mL 31.8127 mL
5 mM 0.6363 mL 3.1813 mL 6.3625 mL
10 mM 0.3181 mL 1.5906 mL 3.1813 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • HPOB

    Effects of HPOB on cell growth and viability and acetylated patterns of proteins and histones in normal and transformed cells in culture.Proc Natl Acad Sci U S A.2013 Sep 24;110(39):15704-9.
  • HPOB

    HPOB enhances etoposide-, doxorubicin-, and SAHA-induced transformed cell death but not normal cell death.Proc Natl Acad Sci U S A.2013 Sep 24;110(39):15704-9.
  • HPOB

    HPOB enhances anticancer effects of SAHA in mice bearing human prostate cancer CWR22 xenograft.Proc Natl Acad Sci U S A.2013 Sep 24;110(39):15704-9.
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