Droxinostat (NS41080)

Alias: NS 41080; NS41080; NS-41080
Cat No.:V0290 Purity: ≥98%
Droxinostat(formerly NS-41080) is a novel, potent, selective inhibitor of histone deacetylase (HDAC) with potential anticancer activity.
Droxinostat (NS41080) Chemical Structure CAS No.: 99873-43-5
Product category: HDAC
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

Droxinostat (formerly NS-41080) is a novel, potent, selective inhibitor of histone deacetylase (HDAC) with potential anticancer activity. It exhibits >8-fold selectivity over HDAC3 and inhibits HDAC6 and HDAC8 with IC50s of 2.47 μM and 1.46 μM, respectively.

Biological Activity I Assay Protocols (From Reference)
Targets
HDAC8 ( IC50 = 1.46 μM ); HDAC6 ( IC50 = 2.47 μM ); HDAC3 ( IC50 = 16.9 μM )
ln Vitro

In vitro activity: Droxinostat was first discovered to downregulate the expression of c-Fas-associated death domain-like interleukin-1-converting enzyme-like inhibitory protein (c-FLIP), which sensitizes PPC-1 cells to FAS and TRAIL.[1] Droxinostat (20 μM–60 μM) sensitizes PPC-1 cells cultured in suspension but not adherent conditions by first activating caspase 8 and then activating the mitochondrial pathway. Similar to this, doxorubicin also makes PC-3, DU-145, T47D, and OVCAR-3 cancer cell lines more susceptible to anoikis or CH-11-induced apoptosis, but not LNCaP or MB-MDA-468.[2] Nevertheless, until recently, Droxinostat's direct targets were unknown. Droxinostat selectively inhibits HDAC3, 6, and 8 (IC50 values of 16.9 μM, 2.47 μM, and 1.46 μM, respectively) in histone deacetylases (HDAC) isoforms 1–10, while leaving other HDAC members (IC50 > 20 μM unaffected. In [3] Droxinostat (10 μM–100 μM) reduces cell survival, induces apoptosis, and sensitizes MCF-7 breast cancer cells to apoptosis by lowering the expression of c-FLIPL and c-FLIPS.[4]

ln Vivo
Droxinostat (30 μM)-treated PPC-1 cells in SCID mouse models result in less distant tumor formation than untreated cells.[2]
Enzyme Assay
HDAC inhibition is measured using crude nuclear extract from HeLa cells and the CycLex HDACs fluorometric assay, following the manufacturer's instructions (principally HDAC1 and HDAC2). (Treated sample fluorescence intensity / Control sample fluorescence intensity) × 100 represents the relative activity.
Cell Assay
PPC-1 cells (1 × 104) are seeded in 100 μL of 2.5% FCS-containing medium overnight into 96-well flat-bottomed plates. We add Droxinostat the following day. After adding CH-11 antibody (100 ng/mL), the cells are incubated for 24 hours. The 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) dye reduction assay is then used to determine the viability of the cells.
Animal Protocol
30 μM
Mice
References

[1]. Cancer Res . 2006 Feb 15;66(4):2367-75.

[2]. J Natl Cancer Inst . 2007 May 16;99(10):811-22.

[3]. Mol Cancer Ther . 2010 Jan;9(1):246-56.

[4]. Mol Cell Biochem . 2010 Sep;342(1-2):133-142.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C11H14CLNO3
Molecular Weight
243.69
Exact Mass
243.07
Elemental Analysis
C, 54.22; H, 5.79; Cl, 14.55; N, 5.75; O, 19.70
CAS #
99873-43-5
Related CAS #
99873-43-5
Appearance
Solid powder
SMILES
CC1=C(C=CC(=C1)Cl)OCCCC(=O)NO
InChi Key
JHSXDAWGLCZYSM-UHFFFAOYSA-N
InChi Code
InChI=1S/C11H14ClNO3/c1-8-7-9(12)4-5-10(8)16-6-2-3-11(14)13-15/h4-5,7,15H,2-3,6H2,1H3,(H,13,14)
Chemical Name
4-(4-chloro-2-methylphenoxy)-N-hydroxybutanamide
Synonyms
NS 41080; NS41080; NS-41080
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ~49 mg/mL (~201.1 mM)
Water: <1 mg/mL
Ethanol: ~49 mg/mL (~201.1 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (10.26 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (10.26 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (10.26 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


Solubility in Formulation 4: 30% propylene glycol, 5% Tween 80, 65% D5W: 30mg/mL

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.1036 mL 20.5179 mL 41.0357 mL
5 mM 0.8207 mL 4.1036 mL 8.2071 mL
10 mM 0.4104 mL 2.0518 mL 4.1036 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • Droxinostat
    Droxinostat inhibits HDAC activity.Mol Cancer Ther.2010 Jan;9(1):246-56.
  • Droxinostat
    HDACis sensitize resistant cells to FAS.Mol Cancer Ther.2010 Jan;9(1):246-56.
  • Droxinostat
    Genetic knockdown of HDAC3, HDAC6, and HDAC8 and sensitization to death receptor ligands.Mol Cancer Ther.2010 Jan;9(1):246-56.
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