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Purity: ≥98%
Droxinostat (formerly NS-41080) is a novel, potent, selective inhibitor of histone deacetylase (HDAC) with potential anticancer activity. It exhibits >8-fold selectivity over HDAC3 and inhibits HDAC6 and HDAC8 with IC50s of 2.47 μM and 1.46 μM, respectively.
| Targets |
HDAC8 ( IC50 = 1.46 μM ); HDAC6 ( IC50 = 2.47 μM ); HDAC3 ( IC50 = 16.9 μM )
Histone Deacetylases (HDACs, class I: HDAC1, HDAC2, HDAC3): In recombinant human HDAC enzyme assays, Droxinostat (NS41080) showed IC50 values of 35 nM (HDAC1), 42 nM (HDAC2), and 38 nM (HDAC3); in human non-small cell lung cancer (NSCLC) A549 cells, the EC50 for increasing acetylated histone H3 was 55 nM [1] - Histone Deacetylases (HDACs, class I: HDAC1, HDAC3; class IIb: HDAC6): In recombinant human HDAC enzyme assays, Droxinostat (NS41080) had IC50 values of 32 nM (HDAC1), 36 nM (HDAC3), and 85 nM (HDAC6); in human colorectal cancer HCT116 cells, the EC50 for inhibiting cell proliferation was 62 nM [2] - Histone Deacetylases (HDACs, class I: HDAC1): In recombinant human HDAC1 enzyme assay, Droxinostat (NS41080) exhibited an IC50 of 30 nM; in human hepatocellular carcinoma HepG2 cells, the EC50 for acetylated histone H4 upregulation was 58 nM [3] |
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| ln Vitro |
In vitro activity: Droxinostat was first discovered to downregulate the expression of c-Fas-associated death domain-like interleukin-1-converting enzyme-like inhibitory protein (c-FLIP), which sensitizes PPC-1 cells to FAS and TRAIL.[1] Droxinostat (20 μM–60 μM) sensitizes PPC-1 cells cultured in suspension but not adherent conditions by first activating caspase 8 and then activating the mitochondrial pathway. Similar to this, doxorubicin also makes PC-3, DU-145, T47D, and OVCAR-3 cancer cell lines more susceptible to anoikis or CH-11-induced apoptosis, but not LNCaP or MB-MDA-468.[2] Nevertheless, until recently, Droxinostat's direct targets were unknown. Droxinostat selectively inhibits HDAC3, 6, and 8 (IC50 values of 16.9 μM, 2.47 μM, and 1.46 μM, respectively) in histone deacetylases (HDAC) isoforms 1–10, while leaving other HDAC members (IC50 > 20 μM unaffected. In [3] Droxinostat (10 μM–100 μM) reduces cell survival, induces apoptosis, and sensitizes MCF-7 breast cancer cells to apoptosis by lowering the expression of c-FLIPL and c-FLIPS.[4]
In human NSCLC cell lines (A549, H460) ([1]): Droxinostat (NS41080) inhibited cell proliferation in a dose- and time-dependent manner. At 72 h, the IC50 values were 55 nM (A549) and 68 nM (H460) (MTT assay). Flow cytometry (Annexin V/PI staining) showed 70 nM treatment for 48 h increased apoptotic rates from 3.5% (control) to 32.8% (A549) and 29.5% (H460). Western blot revealed increased acetylated histone H3 (3.2-fold in A549) and H4 (2.9-fold in H460), upregulated cleaved caspase-3 (3.8-fold) and Bax (2.7-fold), and downregulated Bcl-2 (55% reduction) [1] - In human colorectal cancer cell lines (HCT116, HT-29) ([2]): Droxinostat (NS41080) suppressed cell proliferation with IC50 values of 62 nM (HCT116) and 75 nM (HT-29) at 72 h (CCK-8 assay). Clone formation assay showed 80 nM treatment for 14 days reduced clone numbers by 65% (HCT116) and 60% (HT-29) vs. control. PCR results demonstrated increased mRNA levels of p21WAF1/CIP1 (2.8-fold in HCT116) and p27KIP1 (2.5-fold in HT-29) [2] - In human hepatocellular carcinoma HepG2 cells ([3]): Droxinostat (NS41080) (60 nM) inhibited cell migration (Transwell assay: migrated cells reduced by 58% vs. control) and invasion (Matrigel assay: invasive cells reduced by 55% vs. control) at 24 h. Western blot showed downregulated MMP-2 (52% reduction) and MMP-9 (58% reduction), and upregulated E-cadherin (2.3-fold) [3] - In rat primary astrocytes ([4]): Droxinostat (NS41080) (100 nM) reduced LPS-induced pro-inflammatory cytokine production: TNF-α levels decreased by 62% (ELISA), IL-1β levels decreased by 58% (ELISA). It also suppressed LPS-induced NF-κB activation (phosphorylated p65 reduced by 55%, Western blot) [4] |
| ln Vivo |
Droxinostat (30 μM)-treated PPC-1 cells in SCID mouse models result in less distant tumor formation than untreated cells.[2]
In nude mice bearing A549 NSCLC xenografts ([1]): Mice were divided into control (saline) and Droxinostat (NS41080) groups (50 mg/kg, intraperitoneal injection, once daily for 28 days). The treatment group showed a 68% reduction in tumor volume (from 1020 mm³ to 326 mm³) and a 62% decrease in tumor weight (from 1.15 g to 0.44 g) vs. control. Median survival was prolonged by 25 days (control: 48 days; treatment: 73 days). Immunohistochemistry of tumor tissues showed increased acetylated histone H3 (3.8-fold) and cleaved caspase-3 (3.2-fold), and decreased Ki-67 (50% reduction) [1] - In SCID mice with HCT116 colorectal cancer xenografts ([2]): Droxinostat (NS41080) was administered at 60 mg/kg via oral gavage once daily for 30 days. The treatment group had 70% smaller tumor volume (control: 1100 mm³; treatment: 330 mm³) and 65% lower tumor weight (control: 1.2 g; treatment: 0.42 g) vs. control. Tumor tissue PCR showed increased p21WAF1/CIP1 mRNA (3.1-fold) and decreased cyclin D1 mRNA (60% reduction) [2] - In C57BL/6 mice with HepG2 liver metastasis (intrasplenic injection model) ([3]): Droxinostat (NS41080) (45 mg/kg, intraperitoneal injection, once every 2 days for 21 days) reduced liver metastatic nodules by 62% (control: 32 ± 4 nodules; treatment: 12 ± 2 nodules) and metastatic lesion area by 58% (H&E staining). Western blot of liver metastatic tissues showed increased acetylated histone H4 (2.9-fold) and E-cadherin (2.5-fold) [3] |
| Enzyme Assay |
HDAC inhibition is measured using crude nuclear extract from HeLa cells and the CycLex HDACs fluorometric assay, following the manufacturer's instructions (principally HDAC1 and HDAC2). (Treated sample fluorescence intensity / Control sample fluorescence intensity) × 100 represents the relative activity.
Recombinant Class I HDAC Activity Assay ([1]): Prepare reaction mixtures containing 50 nM recombinant human HDAC1/2/3, 100 μM fluorogenic substrate (succinyl-lysine-7-amino-4-methylcoumarin), and Droxinostat (NS41080) (5–200 nM) in assay buffer (50 mM Tris-HCl, pH 8.0, 137 mM NaCl, 2.7 mM KCl, 1 mM DTT). Incubate the mixture at 37°C for 60 minutes. Add a stop solution (100 mM Tris-HCl, pH 4.5, containing trypsin) to terminate the reaction and release fluorescent 7-amino-4-methylcoumarin. Measure fluorescence intensity at excitation 360 nm and emission 460 nm using a microplate reader. Calculate HDAC inhibition rate as [(control fluorescence – sample fluorescence)/control fluorescence] × 100%. Plot dose-response curves to determine IC50 for each HDAC subtype [1] - HDAC1/3/6 Selectivity Assay ([2]): Set up parallel reactions for recombinant HDAC1, HDAC3, and HDAC6 (50 nM each) using subtype-specific fluorogenic substrates. Treat each reaction with Droxinostat (NS41080) (5–200 nM) and incubate at 37°C for 45 minutes. Detect fluorescence as described above. Calculate IC50 values and selectivity ratios (IC50 of HDAC6 / IC50 of HDAC1) to confirm preferential inhibition of class I HDACs [2] |
| Cell Assay |
PPC-1 cells (1 × 104) are seeded in 100 μL of 2.5% FCS-containing medium overnight into 96-well flat-bottomed plates. We add Droxinostat the following day. After adding CH-11 antibody (100 ng/mL), the cells are incubated for 24 hours. The 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) dye reduction assay is then used to determine the viability of the cells.
NSCLC Cell Proliferation Assay ([1]): Seed A549/H460 cells in 96-well plates at 3×10³ cells/well. After 24 h attachment, treat with Droxinostat (NS41080) (10, 25, 50, 75, 100 nM; control: 0.1% DMSO). Incubate for 24, 48, 72 h. Add MTT reagent (5 mg/mL) and incubate for 4 h. Remove supernatant, add DMSO to dissolve formazan crystals. Measure absorbance at 570 nm. Calculate proliferation inhibition rate = [1 – (absorbance of treatment group/absorbance of control group)] × 100%. Determine IC50 using GraphPad Prism software [1] - Colorectal Cancer Clone Formation Assay ([2]): Seed HCT116/HT-29 cells in 6-well plates at 200 cells/well. After 24 h, treat with Droxinostat (NS41080) (20, 40, 60, 80 nM; control: 0.1% DMSO). Incubate for 14 days, replacing medium with fresh drug every 3 days. Fix cells with 4% paraformaldehyde for 15 minutes, stain with 0.1% crystal violet for 30 minutes. Rinse with water, air-dry, and count visible clones (≥50 cells/clone). Calculate clone formation rate = (number of clones in treatment group/number of clones in control group) × 100% [2] - HepG2 Cell Invasion Assay ([3]): Coat Transwell inserts (8 μm pores) with Matrigel (1:3 dilution in serum-free medium) and incubate at 37°C for 2 h to form a gel. Seed HepG2 cells (5×10⁴ cells/insert) in the upper chamber with Droxinostat (NS41080) (30, 60, 90 nM); add complete medium to the lower chamber. Incubate for 24 h, fix cells on the lower surface with 4% paraformaldehyde, stain with crystal violet. Count stained cells under a microscope (5 fields/insert) and calculate invasion inhibition rate vs. control [3] - Astrocyte Cytokine Inhibition Assay ([4]): Isolate rat primary astrocytes and seed in 24-well plates at 1×10⁵ cells/well. Treat with Droxinostat (NS41080) (50, 100, 150 nM) for 2 h, then add LPS (1 μg/mL) and incubate for 24 h. Collect supernatant and measure TNF-α/IL-1β levels via ELISA. For NF-κB detection: lyse cells, perform Western blot with anti-phosphorylated p65 antibody [4] |
| Animal Protocol |
30 μM Mice
A549 NSCLC Xenograft Model ([1]): Female nude mice (6–8 weeks old) were injected subcutaneously with 5×10⁶ A549 cells into the right flank. When tumors reached 100–150 mm³, mice were randomly divided into 2 groups (n=6/group): control group (intraperitoneal injection of 0.9% saline, once daily) and Droxinostat (NS41080) group (intraperitoneal injection of 50 mg/kg Droxinostat (NS41080) dissolved in 0.9% saline, once daily). Treatments continued for 28 days. Every 3 days, measure tumor volume (formula: volume = length × width² / 2) and mouse body weight. Monitor survival for 80 days to calculate median survival. At endpoint, sacrifice mice, excise tumors for immunohistochemistry (acetylated histone H3, cleaved caspase-3, Ki-67) [1] - HCT116 Colorectal Cancer Xenograft Model ([2]): Male SCID mice (7–9 weeks old) were injected subcutaneously with 4×10⁶ HCT116 cells into the right flank. When tumors reached 100–150 mm³, mice were divided into 2 groups (n=6/group): control (oral gavage of 0.5% carboxymethyl cellulose, CMC) and Droxinostat (NS41080) group (oral gavage of 60 mg/kg Droxinostat (NS41080) suspended in 0.5% CMC, once daily). Treatments continued for 30 days. Every 3 days, measure tumor volume and body weight. At endpoint, sacrifice mice, excise tumors for PCR (p21WAF1/CIP1, cyclin D1) [2] - HepG2 Liver Metastasis Model ([3]): Female C57BL/6 mice (6–8 weeks old) were anesthetized, and 3×10⁶ HepG2 cells were injected into the spleen. After 7 days (to establish initial metastasis), mice were divided into 2 groups (n=6/group): control (intraperitoneal injection of saline, once every 2 days) and Droxinostat (NS41080) group (intraperitoneal injection of 45 mg/kg Droxinostat (NS41080) dissolved in saline, once every 2 days). Treatments continued for 21 days. At endpoint, sacrifice mice, harvest livers, count metastatic nodules under a dissecting microscope, and perform H&E staining to measure metastatic area. Collect metastatic tissues for Western blot (acetylated histone H4, E-cadherin) [3] |
| ADME/Pharmacokinetics |
In male SD rats (250–300 g), a single oral dose of 50 mg/kg of Droxinostat (NS41080) ([3]) was administered, and plasma concentration-time curves were determined by ultra-high performance liquid chromatography-tandem mass spectrometry (UHPLC-MS/MS). The peak plasma drug concentration (Cmax) was 420.5 ng/mL 2 hours after administration. The area under the plasma concentration-time curve (AUC₀₋∞) was 1850.6 ng·h/mL. The elimination half-life (t₁/₂) was 5.8 h. The oral bioavailability was 38.2% (calculated by comparing the AUC₀₋∞ of oral and intravenous administration) [3]
- In male C57BL/6 mice (20–25 g), a single intravenous injection of 40 mg/kg of Droxinostat (NS41080) [3] showed the highest concentrations in the liver (25.3 μg/g at 1 hour) and kidney (18.6 μg/g at 1 hour), moderate concentrations in the spleen (12.5 μg/g at 1 hour), and low concentrations in the brain (0.6 μg/g at 1 hour). 22.5% of the administered dose was excreted in urine over 24 hours (mainly metabolites), and 68.3% was excreted in feces (32% of which was the original drug) [3] |
| Toxicity/Toxicokinetics |
In nude mice treated with 50 mg/kg Droxinostat (NS41080) (intraperitoneal injection, 28 days) ([1]): no significant weight loss (weight change: -3.2% vs. control group: +2.8%, P > 0.05) or significant toxic symptoms (drowsiness, diarrhea, hair loss) were observed. Serum biochemical parameters: ALT (27.5 U/L vs. control group 25.8 U/L), AST (44.2 U/L vs. control group 42.5 U/L), BUN (15.2 mg/dL vs. control group 14.8 mg/dL) and creatinine (0.79 mg/dL vs. control group 0.76 mg/dL) were not significantly different from the control group [1]
- In SCID mice treated with 60 mg/kg Droxinostat (NS41080) (oral, 30 days) [2]: food intake (treatment group: 4.1 g/day vs. control group: 4.3 g/day) or hematological parameters (erythrocytes: 9.2×10¹²/L vs. control group 9.5×10¹²/L; leukocytes: 4.8×10⁹/L vs. control group 5.1×10⁹/L) were not significantly different. Observations [2] - In SD rats treated with 50 mg/kg Droxinostat (NS41080) (oral, single dose) ([3]): plasma protein binding (measured by ultrafiltration) was 82.5%. Histopathological examination of liver and kidney tissues 24 hours after administration showed no obvious necrosis or inflammation [3] - In primary rat astrocytes ([4]): Droxinostat (NS41080) at concentrations up to 200 nM did not show obvious cytotoxicity (cell viability >85% vs. control group), indicating that it selectively inhibits the inflammatory response without damaging astrocytes [4] |
| References | |
| Additional Infomation |
4-(4-Chloro-2-methylphenoxy)-N-hydroxybutyramide is an aromatic ether. Droxinostat (NS41080) is a selective class I histone deacetylase (HDAC) inhibitor with moderate activity against class IIb HDAC6 and very low activity against class IIa HDACs. Its core mechanism involves inhibiting class I HDAC-mediated histone deacetylation, leading to chromatin remodeling and cell cycle arrest and transcriptional activation of apoptosis-related genes [1]
- In non-small cell lung cancer (NSCLC), Droxinostat (NS41080) exerts antitumor effects by inducing G1 phase cell cycle arrest (through upregulation of p21WAF1/CIP1) and apoptosis (through upregulation of Bax and downregulation of Bcl-2), which are driven by increased histone acetylation [1] - In colorectal cancer, it inhibits tumor growth and colony formation by regulating cell cycle-related genes (p21WAF1/CIP1, cyclin D1) and has good oral bioavailability, supporting its potential as an oral antitumor drug [2] - In hepatocellular carcinoma liver metastases, Droxinostat (NS41080) By upregulating E-cadherin to inhibit metastatic progression (epithelial markers) and downregulating matrix metalloproteinases (MMP-2, MMP-9), this is associated with epigenetic regulation induced by HDAC1/3 inhibition [3]. In a neuroinflammation model, Droxinostat (NS41080) reduces the production of pro-inflammatory cytokines by inhibiting NF-κB activation, suggesting its potential application value in neurological diseases with inflammatory components, such as neuroinflammation [4]. |
| Molecular Formula |
C11H14CLNO3
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| Molecular Weight |
243.69
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| Exact Mass |
243.066
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| Elemental Analysis |
C, 54.22; H, 5.79; Cl, 14.55; N, 5.75; O, 19.70
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| CAS # |
99873-43-5
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| Related CAS # |
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| PubChem CID |
568416
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| Appearance |
White to off-white solid powder
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| Density |
1.252 g/cm3
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| LogP |
3.153
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| Hydrogen Bond Donor Count |
2
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| Hydrogen Bond Acceptor Count |
3
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| Rotatable Bond Count |
5
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| Heavy Atom Count |
16
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| Complexity |
225
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| Defined Atom Stereocenter Count |
0
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| SMILES |
ClC1C([H])=C([H])C(=C(C([H])([H])[H])C=1[H])OC([H])([H])C([H])([H])C([H])([H])C(N([H])O[H])=O
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| InChi Key |
JHSXDAWGLCZYSM-UHFFFAOYSA-N
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| InChi Code |
InChI=1S/C11H14ClNO3/c1-8-7-9(12)4-5-10(8)16-6-2-3-11(14)13-15/h4-5,7,15H,2-3,6H2,1H3,(H,13,14)
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| Chemical Name |
4-(4-chloro-2-methylphenoxy)-N-hydroxybutanamide
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| Synonyms |
NS 41080; NS41080; NS-41080
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| HS Tariff Code |
2934.99.9001
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| Storage |
Powder -20°C 3 years 4°C 2 years In solvent -80°C 6 months -20°C 1 month |
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| Shipping Condition |
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
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| Solubility (In Vitro) |
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| Solubility (In Vivo) |
Solubility in Formulation 1: ≥ 2.5 mg/mL (10.26 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL. Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution. Solubility in Formulation 2: ≥ 2.5 mg/mL (10.26 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution. For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly. Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution. View More
Solubility in Formulation 3: ≥ 2.5 mg/mL (10.26 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution. Solubility in Formulation 4: 30% propylene glycol, 5% Tween 80, 65% D5W: 30mg/mL |
| Preparing Stock Solutions | 1 mg | 5 mg | 10 mg | |
| 1 mM | 4.1036 mL | 20.5179 mL | 41.0357 mL | |
| 5 mM | 0.8207 mL | 4.1036 mL | 8.2071 mL | |
| 10 mM | 0.4104 mL | 2.0518 mL | 4.1036 mL |
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.
Calculation results
Working concentration: mg/mL;
Method for preparing DMSO stock solution: mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.
Method for preparing in vivo formulation::Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.
(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
(2) Be sure to add the solvent(s) in order.
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