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Purity: ≥98%
Clofarabine(formerly C1 F-Ara-A; C1 F-Ara-A; CAFdA; trade names: Clofarex; Clolar) is an antimetabolite anticancer chemotherapeutic drug and a purine nucleoside approved for the treatment of relapsed or refractory acute lymphoblastic leukemia. It functions as both a substrate of Deoxycytidine Kinase (dCK) and an inhibitor of DNA synthesis. DNA polymerase-α and -ε are competed with by clofarabine triphosphate, which is produced when clofarabine is phosphorylated. DNA elongation and repair are hampered when clofarabine-monophosphate is incorporated into internal and terminal DNA sites at the same time. With an IC50 value of 65 nM, clofarabine triphosphate inhibits ribonucleotide reductase, reducing dCTP and dATP in the process. Through the nucleoside transporters hENT1, hENT2, and hCNT2, clofarabine is effectively incorporated into cells.
Targets |
Ribonucleotide reductase ( IC50 = 65 nM )
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ln Vitro |
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ln Vivo |
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Cell Assay |
Cell Line: NB4 cells
Concentration: 0.01-0.1 µM Incubation Time: 48 hours Result: Inhibited proliferation of NB4 cells in a concentration-depended manner. |
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Animal Protocol |
Kunming mice (18-22 g, with equal numbers of male and female mice)
600, 480, 384, 307, 246 mg/kg Injected intraperitoneally at 8:00 am, 12:00 noon, 8:00 pm and 12:00 midnight; 7 days continuous administration |
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References |
Molecular Formula |
C10H11CLFN5O3
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Molecular Weight |
303.68
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Exact Mass |
303.05
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Elemental Analysis |
C, 39.55; H, 3.65; Cl, 11.67; F, 6.26; N, 23.06; O, 15.81
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CAS # |
123318-82-1
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Related CAS # |
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Appearance |
Solid powder
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SMILES |
C1=NC2=C(N=C(N=C2N1[C@H]3[C@H]([C@@H]([C@H](O3)CO)O)F)Cl)N
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InChi Key |
WDDPHFBMKLOVOX-AYQXTPAHSA-N
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InChi Code |
InChI=1S/C10H11ClFN5O3/c11-10-15-7(13)5-8(16-10)17(2-14-5)9-4(12)6(19)3(1-18)20-9/h2-4,6,9,18-19H,1H2,(H2,13,15,16)/t3-,4+,6-,9-/m1/s1
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Chemical Name |
(2R,3R,4S,5R)-5-(6-amino-2-chloropurin-9-yl)-4-fluoro-2-(hydroxymethyl)oxolan-3-ol
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Synonyms |
C1 F-Ara-A; C1-F-Ara-A; Clofarabine; C1 F-Ara-A; trade names: Clofarex; Clolar. Abbreviation: CAFdA
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HS Tariff Code |
2934.99.9001
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Storage |
Powder -20°C 3 years 4°C 2 years In solvent -80°C 6 months -20°C 1 month |
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Shipping Condition |
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
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Solubility (In Vitro) |
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Solubility (In Vivo) |
Solubility in Formulation 1: ≥ 2.08 mg/mL (6.85 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL. Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution. Solubility in Formulation 2: ≥ 2.08 mg/mL (6.85 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution. For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly. Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution. View More
Solubility in Formulation 3: ≥ 2.08 mg/mL (6.85 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution. |
Preparing Stock Solutions | 1 mg | 5 mg | 10 mg | |
1 mM | 3.2929 mL | 16.4647 mL | 32.9294 mL | |
5 mM | 0.6586 mL | 3.2929 mL | 6.5859 mL | |
10 mM | 0.3293 mL | 1.6465 mL | 3.2929 mL |
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.
Calculation results
Working concentration: mg/mL;
Method for preparing DMSO stock solution: mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.
Method for preparing in vivo formulation::Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.
(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
(2) Be sure to add the solvent(s) in order.
NCT Number | Recruitment | interventions | Conditions | Sponsor/Collaborators | Start Date | Phases |
NCT01228331 | Active Recruiting |
Drug: Amsacrine Drug: Clofarabine |
Leukemia | Universitätsklinikum Hamburg- Eppendorf |
October 2010 | Phase 2 Phase 3 |
NCT01701986 | Active Recruiting |
Drug: Busulfan Drug: Clofarabine |
Refractory B-Cell Non-Hodgkin Lymphoma Refractory Hodgkin Lymphoma |
M.D. Anderson Cancer Center | October 25, 2012 | Phase 1 Phase 2 |
NCT02085408 | Active Recruiting |
Drug: Daunorubicin Drug: Cytarabine |
Adult Pure Erythroid Leukemia (M6b) Adult Erythroleukemia (M6a) |
ECOG-ACRIN Cancer Research Group | February 4, 2011 | Phase 3 |
NCT02425904 | Active Recruiting |
Drug: Clofarabine | Langerhans Cell Histiocytosis | Dana-Farber Cancer Institute | May 2015 | Phase 2 |
NCT01885689 | Active Recruiting |
Drug: clofarabine Drug: melphalan |
Chronic Myelomonocytic Leukemia Myelodysplastic Syndrome |
City of Hope Medical Center | February 10, 2014 | Phase 2 |