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BI-409306

Alias: SUB 166499; SUB-166499; SUB166499; BI-409306; BI 409306; BI409306
Cat No.:V3770 Purity: ≥98%
BI 409306 (SUB 166499) isa novel potent, selective and oral phosphodiesterase 9A (PDE9A)inhibitor.
BI-409306
BI-409306 Chemical Structure CAS No.: 1189767-28-9
Product category: Phosphodiesterase(PDE)
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description
BI 409306 (SUB 166499) is a novel potent, selective and oral phosphodiesterase 9A (PDE9A) inhibitor. Cyclic guanosine monophosphate (cGMP)-specific phosphodiesterase (PDE) inhibitors are hypothesized to improve cognition in schizophrenia and Alzheimer disease by increasing cGMP levels in certain brain regions. BI 409306has an IC50 of 52 nM and shows weak activity against other PDEs, such as PDE1A (IC50, 1.4 µM), PDE1C (IC50, 1.0 µM), PDE2A, PDE3A, PDE4B, PDE5A, PDE6AB, PDE7A, and PDE10A (IC50 all > 10 μM); BI-409306 can be used in the research of memory enhancement in CNS disorders. BI 409306 was generally safe and well tolerated, with rapid absorption and elimination. Systemic exposure was higher in CYP2C19 PMs than EMs at the same dose level.


BI-409306 (CAS#: 1189767-28-9) is a novel, potent, and selective phosphodiesterase 9A (PDE9A) inhibitor in clinical development. It increases cGMP levels in the brain, promotes synaptic plasticity (enhances hippocampal long-term potentiation), and improves working and episodic memory in rodents. [1]
Biological Activity I Assay Protocols (From Reference)
Targets
BI-409306 (CAS#: 1189767-28-9) targets human PDE9A (IC50 = 65 ± 11 nM), rat PDE9A (IC50 = 168 nM), human PDE1A (IC50 = 1.45 μM), human PDE1C (IC50 = 1.17 μM). No inhibitory activity (IC50 > 10 μM) against human PDE2A, 3A, 4B, 5A, 6AB, 7A, and 10A. [1]
ln Vitro
Osoresnontrine is a potent and selective PDE9A inhibitor, with an IC50 of 52 nM, and shows weak activity against other PDEs, such as PDE1A (IC50, 1.4 µM), PDE1C (IC50, 1.0 µM), PDE2A, PDE3A, PDE4B, PDE5A, PDE6AB, PDE7A, and PDE10A (IC50 all > 10 μM), and has no obvious effect on 95 non-PDE targets at 10 μM. Osoresnontrine improves long-term potentiation (LTP) in rat hippocampus slices[1].
BI-409306 (CAS#: 1189767-28-9) is a potent and selective inhibitor of PDE9A in vitro, with mean IC50 of 65 nM for human PDE9A and 168 nM for rat PDE9A. It shows weak inhibition of PDE1A (1.45 μM) and PDE1C (1.17 μM), and no inhibition (IC50 >10 μM) of PDE2A, 3A, 4B, 5A, 6AB, 7A, and 10A. It has no significant activity against 95 non-PDE targets at 10 μM. [1]
ln Vivo
BI-409306 (CAS#: 1189767-28-9) increases cGMP levels in rat prefrontal cortex and cerebrospinal fluid (CSF) in a dose-dependent manner after intraperitoneal or oral administration. At 7.5 mg/kg i.p., it increased extracellular cGMP by 187.9% at 20 min; at 15 mg/kg i.p., significant increases at 20, 40, and 180 min. Oral administration at 3 and 10 mg/kg significantly increased cGMP in rat CSF (p<0.001). It reverses MK-801-induced reduction in mouse striatal cGMP: 0.5 mg/kg i.p. significantly attenuated the decrease (41% increase vs MK-801 alone, p<0.01). [1]
It enhances hippocampal long-term potentiation (LTP) ex vivo in rat slices: at 1 μM (bath-applied) enhances LTP induced by weak tetanic stimulation (p=0.021); at 0.3 μM enhances LTP induced by strong tetanic stimulation (p=0.048). [1]
It improves working memory in mice: oral BI 409306 (0.007-2.5 mg/kg) reverses MK-801-induced deficit in T-maze spontaneous alternation (p<0.05). It improves episodic memory: i.p. 0.15 mg/kg (30 min before trial 1) significantly increases novel object exploration time 24 h later (p<0.001). [1]
Enzyme Assay
In vitro potency and selectivity were determined using scintillation proximity assays (SPA) for PDE inhibition. Recombinant human and rat PDE isoforms were expressed in SF9 insect cells via baculovirus system. Cell extracts containing PDE were incubated with serial dilutions of BI-409306 (CAS#: 1189767-28-9) in assay buffer (50 mM Tris pH 7.4, 8.3 mM MgCl2, 1.7 mM EGTA, 0.1% BSA, 0.05% Tween-20). For PDE1A/1C, 200 nM calmodulin and 12 mM CaCl2 were added. The reaction was initiated by adding 80 nM ³H-cGMP or ³H-cAMP (1 mCi/L) and incubated 1 h at room temperature. The reaction was stopped with 50 μM inhibitor solution and 17.9 mg/ml yttrium silicate SPA beads. Conversion of substrate was measured by scintillation counting. IC50 values were calculated using GraphPad Prism. Selectivity against non-PDE targets was assessed by receptor binding assays at MDS Pharma Services. [1]
Animal Protocol



For microdialysis: Male Sprague-Dawley rats (200-250 g) were implanted with transcebral microdialysis probes in prefrontal cortex under chloral hydrate anesthesia. After 24 h recovery, probes were infused with artificial CSF at 5 μl/min. BI-409306 (CAS#: 1189767-28-9) (1.5, 7.5, 15 mg/kg) or vehicle (0.9% NaCl, 0.1 M HCl, 0.2 M NaOH, pH 4.5-4.6) was injected i.p. after three basal samples. Dialysate collected every 20 min for 240 min. cGMP measured by ¹²⁵I-radioimmunoassay. [1]
For rat CSF cGMP: Male Wistar rats (250-320 g) received oral BI-409306 (CAS#: 1189767-28-9) (0.3, 1, 3, 10 mg/kg) or vehicle (sodium chloride pH 2.8). After 30 min, CSF collected from cisterna magna, centrifuged, and cGMP measured by LC-MS/MS with [¹⁵N5]cGMP internal standard. [1]
For mouse striatal cGMP: Male CD-1 mice (25-28 g) received i.p. BI-409306 (CAS#: 1189767-28-9) (0.15 or 0.5 mg/kg) ± s.c. MK-801 (0.125 mg/kg). After 30 min, animals euthanized by focused microwave irradiation, striatal tissue collected, homogenized, and cGMP measured by ELISA. [1]
For electrophysiology: Transverse hippocampal slices (400 μm) from male Wistar rats (7-8 weeks) were maintained in interface-type perfusion chamber at 33°C. fEPSPs recorded from CA1 stratum radiatum. BI-409306 (CAS#: 1189767-28-9) (0.1, 0.3, 1 μM) or vehicle (0.01% DMSO) was bath-applied. Weak tetanic stimulation: four paired pulses (200 ms interval). Strong tetanic stimulation: ten 4-pulse bursts (200 ms intervals) repeated once after 10 min. LTP measured as fEPSP slope change. [1]
For T-maze: Male CD-1 mice (4-5 weeks) received oral BI-409306 (CAS#: 1189767-28-9) (0.007-2.5 mg/kg) or vehicle (0.5% Tylose) 60 min before test, and s.c. MK-801 (0.1 mg/kg) 30 min before. Continuous alternation task: one forced-choice then 14 free-choice trials. Percentage of correct alternations recorded. [1]
For object recognition: Male C57BL/6J mice (3-4 months) received i.p. BI-409306 (CAS#: 1189767-28-9) (0.015 or 0.15 mg/kg) or vehicle (saline) 30 min before trial 1. Trial 1: two identical objects for 10 min. Trial 2 (24 h later): one familiar and one novel object for 10 min. Exploration time recorded. [1]
ADME/Pharmacokinetics
After oral administration of BI-409306 (CAS#: 1189767-28-9) at 1.5 mg/kg in rats: mean plasma concentrations (n=3) were 892 nM at 0.5 h, 714 nM at 1 h, 683 nM at 2 h, 50 nM at 4 h. In mice (NMRI, 20-25 g) at same dose: 2097 nM at 0.5 h, 2227 nM at 1 h, 1042 nM at 2 h, 183 nM at 4 h. CSF concentration of BI 409306 was approximately 20% of plasma concentration (from separate study). [1]
References

[1]. BI 409306, a novel phosphodiesterase 9A inhibitor, part I: potency, selectivity and in-vitro functional characterization on synaptic plasticity. International Congress on Schizophrenia Research.

Additional Infomation
Osoresnontrine is being investigated in the clinical trial NCT02281773 (a study designed to investigate the efficacy, safety, and tolerability of four different doses of BI 409306 compared to placebo in patients with schizophrenia receiving stable antipsychotic medication over a 12-week period).
BI-409306 (CAS#: 1189767-28-9) is a PDE9A inhibitor developed by Boehringer Ingelheim. It has been evaluated in phase I and phase II clinical trials for cognitive impairment in schizophrenia and Alzheimer's disease. CSF cGMP levels are a translatable biomarker of target engagement. The compound enhances both early and late-phase LTP, suggesting promotion of protein synthesis-dependent long-term memory consolidation. [1]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C16H17N5O2
Molecular Weight
311.338482618332
Exact Mass
311.138
CAS #
1189767-28-9
Related CAS #
1189767-28-9;
PubChem CID
135908617
Appearance
White to off-white solid powder
LogP
0.2
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
3
Heavy Atom Count
23
Complexity
477
Defined Atom Stereocenter Count
0
SMILES
O1CCC(CC1)N1C2=C(C(NC(CC3C=CC=CN=3)=N2)=O)C=N1
InChi Key
BZTIJCSHNVZMES-UHFFFAOYSA-N
InChi Code
InChI=1S/C16H17N5O2/c22-16-13-10-18-21(12-4-7-23-8-5-12)15(13)19-14(20-16)9-11-3-1-2-6-17-11/h1-3,6,10,12H,4-5,7-9H2,(H,19,20,22)
Chemical Name
6-(pyridin-2-ylmethyl)-1-(tetrahydro-2H-pyran-4-yl)-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one
Synonyms
SUB 166499; SUB-166499; SUB166499; BI-409306; BI 409306; BI409306
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO:≥ 75 mg/mL
Water:N/A
Ethanol:N/A
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (8.03 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (8.03 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

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Solubility in Formulation 3: 2.5 mg/mL (8.03 mM) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.2119 mL 16.0596 mL 32.1192 mL
5 mM 0.6424 mL 3.2119 mL 6.4238 mL
10 mM 0.3212 mL 1.6060 mL 3.2119 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
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