BAY-61-3606 dihydrochloride

Alias: BAY-613606; BAY 613606; BAY613606
Cat No.:V2676 Purity: ≥98%
BAY-61-3606 2HCl (BAY 61-3606, BAY 61-3606 dihydrochloride), cell-permeable imidazopyrimidine compound, is a potent and selective, oral, ATP-competitive, reversible inhibitor of Syk (Spleen tyrosine kinase) tyrosine kinase with immunomodulatory effects.
BAY-61-3606 dihydrochloride Chemical Structure CAS No.: 648903-57-5
Product category: Syk
This product is for research use only, not for human use. We do not sell to patients.
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Other Forms of BAY-61-3606 dihydrochloride:

  • BAY-61-3606
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

BAY-61-3606 2HCl (BAY 61-3606, BAY 61-3606 dihydrochloride), cell-permeable imidazopyrimidine compound, is a potent and selective, oral, ATP-competitive, reversible inhibitor of Syk (Spleen tyrosine kinase) tyrosine kinase with immunomodulatory effects. It inhibits Syk with a Ki of 7.5 nM. It shows no inhibitory effect on Btk, Fyn, Itk, Lyn, and Src kinases. It has been demonstrated that BAY 61-3606 inhibits Syk-mediated cellular functions, including the inhibition of high glucose-tyrosine phosphorylation of I kappa B α and nuclear translocation of p65. BAY 61-3606 has inhibited degranulation, lipid mediation, and cytokine synthesis in mast cells. Moreover, BAY 61-3606 inhibited the activation of monocytes and eosinophils by B cells and Fc receptors.

Biological Activity I Assay Protocols (From Reference)
Targets
Syk (Ki = 7.5 nM); Syk (IC50 = 10 nM)
ln Vitro

BAY 61-3606 (0.01-10 μM ; 48 hours) decreases SYK-positive SH-SY5Y and SYK-negative SK-N-BE cells' viability considerably in a dose-dependent manner. SK-N-BE cells expressing very little or no SYK are not as sensitive to BAY 61-3606 as SH-SY5Y cells expressing high levels of SYK [2].
BAY 61-3606 (0.4 and 0.8 μM; 4 or 24 hours) BAY 61-3606 decreases ERK1/2 and Akt phosphorylation, which inhibits SYK activity in neuroblastoma cell SH-SY5Y[2].
BAY 61-3606 (2 μM; 2 hours) significantly reduces Syk phosphorylation in K-rn cell lysates[3].

ln Vivo
Bay 61-3606 (50 mg/kg; administered twice a week for two weeks by intraperitoneal injection) alone produces more effective reductions than TNF-related apoptosis-inducing ligand (TRAIL; 10 mg/kg) alone in MCF-7 tumor xenograft-bearing BALB/c nude mice. The volume of the xenografted tumor is greatly reduced when Bay 61-3606 is used in conjunction with TRAIL[4].
Enzyme Assay
In mast cells, BAY 61-3606 inhibited lipid mediator and cytokine synthesis in addition to degranulation (IC50 values ranging from 5 to 46 nM). In basophils taken from healthy human subjects, BAY 61-3606 was very effective (IC50 = 10 nM), and it appears to be at least as potent (IC50 = 8.1 nM) in basophils taken from atopic (high serum IgE) subjects. BAY 61-3606 was also found to potently suppress B cell receptor activation as well as receptors for the Fc portion of IgG signaling in eosinophils and monocytes. In colorectal cancer cells expressing mutant forms of K-RAS, but not in isogenic cells expressing wild-type K-RAS, we found that BAY61-3606 inhibits the proliferation of these cells. Beyond its ability to inhibit cell division in mutant models, BAY61-3606 demonstrated a unique biological characteristic in wild-type cells: it bestowed susceptibility to RAF inhibition. In this instance, BAY61-3606 worked by blocking MAP4K2 (GCK), which in wild-type cells typically triggers NFκβ signaling in reaction to RAF inhibition.
Cell Assay
After a 24-hour period, MCF-7 cells are exposed to TRAIL (specified concentrations: 0, 12.5, 25, and 37.5 ng/ml) with or without Bay 61-3606 (2.5 μM). Following this exposure, the cells undergo immunocytochemistry using an active Bak antibody. MCF-7 cells exposed to Bay 61-3606 (5 μM) with or without TRAIL (50 ng/ml) for a 24-hour period are tested for caspase activity.
Animal Protocol
Female BALB/c nude mice (5 weeks old) bearing MCF-7 tumor xenograft
50 mg/kg
TRAIL (10 mg/kg), Bay 61-3606 (50 mg/kg), or a combination of both (50 mg/kg) was intraperitoneally injected twice a week; TRAIL was administered two hours following the injection of Bay 61-3606 for a duration of two weeks.
References

[1]. The orally available spleen tyrosine kinase inhibitor 2-[7-(3,4-dimethoxyphenyl)-imidazo[1,2-c]pyrimidin-5-ylamino]nicotinamide dihydrochloride (BAY 61-3606) blocks antigen-induced airway inflammation in rodents. J Pharmacol Exp Ther. 2003 Sep;306(3):1174-81.

[2]. SYK Inhibition Potentiates the Effect of Chemotherapeutic Drugs on Neuroblastoma Cells in Vitro. Cancers (Basel). 2019 Feb 10;11(2). pii: E202.

[3]. Quantitative phosphoproteomics revealed interplay between Syk and Lyn in the resistance to AMN107 in chronic myeloid leukemia cells. Blood. 2011 Aug 25;118(8):2211-21.

[4]. Bay 61-3606 Sensitizes TRAIL-Induced Apoptosis by Downregulating Mcl-1 in Breast Cancer Cells. PLoS One. 2015 Dec 31;10(12):e0146073.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C20H18N6O3.2HCL
Molecular Weight
463.32
Exact Mass
462.0973939
CAS #
648903-57-5
Related CAS #
BAY 61-3606;732983-37-8
Appearance
Solid
SMILES
COC1=C(C=C(C=C1)C2=CC3=NC=CN3C(=N2)NC4=C(C=CC=N4)C(=O)N)OC.Cl.Cl
InChi Key
SPMFEULFGGPQLN-UHFFFAOYSA-N
InChi Code
InChI=1S/C20H18N6O3.2ClH/c1-28-15-6-5-12(10-16(15)29-2)14-11-17-22-8-9-26(17)20(24-14)25-19-13(18(21)27)4-3-7-23-19;;/h3-11H,1-2H3,(H2,21,27)(H,23,24,25);2*1H
Chemical Name
2-[[7-(3,4-dimethoxyphenyl)imidazo[1,2-c]pyrimidin-5-yl]amino]pyridine-3-carboxamide;dihydrochloride
Synonyms
BAY-613606; BAY 613606; BAY613606
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ~92 mg/mL (~198.6 mM)
Water: <1 mg/mL
Ethanol: <1 mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 0.71 mg/mL (1.53 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 7.1 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 0.71 mg/mL (1.53 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 7.1 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.1583 mL 10.7917 mL 21.5834 mL
5 mM 0.4317 mL 2.1583 mL 4.3167 mL
10 mM 0.2158 mL 1.0792 mL 2.1583 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • BAY-61-3606 HCl

    Bay 61–3606 induced ubiquitin-dependent degradation of Mcl-1 by ERK inactivation. PLoS One. 2015 Dec 31;10(12):e0146073.
  • BAY-61-3606 HCl

    Bay 61–3606 downregulated Mcl-1 expression by inhibition of CDK9 and RNA polymerase II phosphorylation. PLoS One. 2015 Dec 31;10(12):e0146073.
  • BAY-61-3606 HCl

    The anti-tumor effect of Bay 61–3606 and TRAIL in vivo. PLoS One. 2015 Dec 31;10(12):e0146073.
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