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BALICATIB

Alias: Balicatib; AAE-581; AAE 581; AAE581
Cat No.:V4361 Purity: ≥98%
Balicatib (also known as AAE-581) is a novel, potent and selective inhibitor of cathepsin K with 10-100 fold higher potency in cell-based enzyme occupancy assays than against cathepsin B, L, and S.
BALICATIB
BALICATIB Chemical Structure CAS No.: 354813-19-7
Product category: Cysteine Protease
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

Balicatib (also known as AAE-581) is a novel, potent and selective cathepsin K inhibitor that, in cell-based enzyme occupancy assays, has 10-100 times the potency of cathepsin B, L, and S combined. Balicatib inhibited bone turnover at most sites, partially prevented changes in bone mass caused by ovariectomy, and had an unexpected stimulatory effect on periosteal bone formation because it inhibits the osteoclastic enzyme cathepsin K.

Biological Activity I Assay Protocols (From Reference)
Targets
cathepsin K (IC50 = 22 nM); cathepsin L (IC50 = 48 nM); Cathepsin B (IC50 = 61 nM); cathepsin S (IC50 = 2900 nM)
Balicatib (0-10 µM) exhibits less than 1.5-fold accumulation of Type I collagen at concentrations up to 10 µM in human dermal fibroblasts[2].
Human cathepsin K (a cysteine protease), reversible inhibitor. [1]
ln Vitro
Balicatib (0-10 µM) exhibits less than 1.5-fold accumulation of Type I collagen at concentrations up to 10 µM in human dermal fibroblasts[2].

In a functional bone resorption assay using rabbit osteoclasts cultured on bovine bone, Balicatib had a corrected bone resorption IC₅₀ of 22 nM (calculated based on the difference between rabbit and human Cat K potencies). This potency was 3- to 4-fold lower than that of odanacatib and L-873724. [2]
In whole cell enzyme occupancy assays using human HepG2 cells (for Cat B and L occupancy) and Ramos cells (for Cat S occupancy), Balicatib showed IC₅₀ values of 61 nM (Cat B), 48 nM (Cat L), and 2900 nM (Cat S), indicating poor cellular selectivity compared to its potency on Cat K. [2]
In a cellular model using primary human dermal fibroblasts (HDF) cultured in a 3-D collagen gel, treatment with 1-10 μM Balicatib for 3 days caused a 3- to 7-fold accumulation of intracellular Type I collagen, as quantified by flow cytometry using an anti-type I collagen antibody. This effect was attributed to its inhibition of multiple cathepsins due to its lysosomotropic properties. [2]

In a functional bone resorption assay using rabbit osteoclasts cultured on bovine bone, Balicatib had a corrected bone resorption IC₅₀ of 22 nM (calculated based on the difference between rabbit and human Cat K potencies). This potency was 3- to 4-fold lower than that of odanacatib and L-873724. [2]
In whole cell enzyme occupancy assays using human HepG2 cells (for Cat B and L occupancy) and Ramos cells (for Cat S occupancy), Balicatib showed IC₅₀ values of 61 nM (Cat B), 48 nM (Cat L), and 2900 nM (Cat S), indicating poor cellular selectivity compared to its potency on Cat K. [2]
In a cellular model using primary human dermal fibroblasts (HDF) cultured in a 3-D collagen gel, treatment with 1-10 μM Balicatib for 3 days caused a 3- to 7-fold accumulation of intracellular Type I collagen, as quantified by flow cytometry using an anti-type I collagen antibody. This effect was attributed to its inhibition of multiple cathepsins due to its lysosomotropic properties. [2]
ln Vivo
Balicatib (0, 3, 10, 50 mg/kg; Oral gavage; twice daily for 18 months) inhibited bone turnover at most sites, slightly prevented changes in bone mass brought on by ovariectomy, and stimulated the formation of periosteal bone in cynomolgus monkeys[1].

In ovariectomized cynomolgus monkeys (a postmenopausal osteoporosis model), treatment with Balicatib for 18 months partially prevented ovariectomy-induced bone mineral density (BMD) loss in the lumbar spine and increased BMD in the femur above levels seen in both ovariectomized and sham-ovariectomized controls. [1]
Balicatib treatment (3, 10, 30 mg/kg/day) significantly inhibited bone turnover at most skeletal sites, as shown by reduced bone formation rates (BFR/BS) in cancellous bone of the vertebra and femur neck, and in endocortical and osteomal bone envelopes. [1]
Unexpectedly, Balicatib treatment significantly stimulated periosteal bone formation. Periosteal bone formation rate (Ps.BFR/BS) was significantly increased at the lumbar vertebra cortex (high dose), femur neck cortex (medium and high doses), and femur midshaft cortex (all doses) compared to ovariectomized controls. [1]

In ovariectomized cynomolgus monkeys (a postmenopausal osteoporosis model), treatment with Balicatib for 18 months partially prevented ovariectomy-induced bone mineral density (BMD) loss in the lumbar spine and increased BMD in the femur above levels seen in both ovariectomized and sham-ovariectomized controls. [1]
Balicatib treatment (3, 10, 30 mg/kg/day) significantly inhibited bone turnover at most skeletal sites, as shown by reduced bone formation rates (BFR/BS) in cancellous bone of the vertebra and femur neck, and in endocortical and osteomal bone envelopes. [1]
Unexpectedly, Balicatib treatment significantly stimulated periosteal bone formation. Periosteal bone formation rate (Ps.BFR/BS) was significantly increased at the lumbar vertebra cortex (high dose), femur neck cortex (medium and high doses), and femur midshaft cortex (all doses) compared to ovariectomized controls. [1]
Enzyme Assay
The in vitro activity (IC₅₀) of Balicatib against human Cat K and off-target cathepsins (B, L, S) was determined using purified enzyme assays. The assay conditions are referenced from a previous publication. IC₅₀ values represent an average of at least three titrations, with standard deviations typically within 35% of the IC₅₀ values. [2]

The in vitro activity (IC₅₀) of Balicatib against human Cat K and off-target cathepsins (B, L, S) was determined using purified enzyme assays. The assay conditions are referenced from a previous publication. IC₅₀ values represent an average of at least three titrations, with standard deviations typically within 35% of the IC₅₀ values. [2]
Cell Assay
The potency of Balicatib in a functional bone resorption assay was evaluated using rabbit osteoclasts cultured on bovine bone slices. The assay measures the inhibition of bone resorption pit formation by osteoclasts. [2]
Whole cell enzyme occupancy assays were performed to evaluate selectivity in a more physiologically relevant context. Human HepG2 cells were used to assess occupancy of Cat B and Cat L, and human Ramos B cells were used to assess occupancy of Cat S. Cells were treated with the compound, lysed, and enzyme occupancy was measured using activity-based probes. [2]
The effect on intracellular collagen accumulation was assessed using primary human dermal fibroblasts (HDF). Fibroblasts were cultured within a three-dimensional collagen gel. Inhibitors were added for the final 3 days of culture. Subsequently, cells were extracted from the collagen matrix using collagenase treatment, then fixed, permeabilized, and stained intracellularly for Type I collagen using a specific monoclonal primary antibody and a FITC-labeled secondary antibody. The mean fluorescence intensity per cell, corresponding to intracellular collagen levels, was quantified by flow cytometry. [2]

The potency of Balicatib in a functional bone resorption assay was evaluated using rabbit osteoclasts cultured on bovine bone slices. The assay measures the inhibition of bone resorption pit formation by osteoclasts. [2]
Whole cell enzyme occupancy assays were performed to evaluate selectivity in a more physiologically relevant context. Human HepG2 cells were used to assess occupancy of Cat B and Cat L, and human Ramos B cells were used to assess occupancy of Cat S. Cells were treated with the compound, lysed, and enzyme occupancy was measured using activity-based probes. [2]
The effect on intracellular collagen accumulation was assessed using primary human dermal fibroblasts (HDF). Fibroblasts were cultured within a three-dimensional collagen gel. Inhibitors were added for the final 3 days of culture. Subsequently, cells were extracted from the collagen matrix using collagenase treatment, then fixed, permeabilized, and stained intracellularly for Type I collagen using a specific monoclonal primary antibody and a FITC-labeled secondary antibody. The mean fluorescence intensity per cell, corresponding to intracellular collagen levels, was quantified by flow cytometry. [2]
Animal Protocol
11-13 years, female cynomolgus monkeys (Macaca fascicularis)[1]
0, 3, 10, 50 mg/kg
Oral gavage; twice daily for 18 months

A total of 100 adult female cynomolgus monkeys (Macaca fascicularis) aged 11-13 years were used. Eighty animals underwent bilateral ovariectomy (Ovx), and 20 underwent sham surgery. Ovx animals were divided into four groups: vehicle control (Group O), and three Balicatib treatment groups receiving 3 (Low, L), 10 (Medium, M), or 50/30 (High, H) mg/kg/day. The high dose was reduced from 50 to 30 mg/kg/day approximately 1 month after initiation due to reduced food consumption. [1]
Balicatib (AAE581 maleate) was dissolved in sterile water. Dose solutions were prepared weekly and refrigerated. The compound was administered orally twice daily via nasogastric intubation, starting the day after surgery, for 18 months. [1]
Bone mineral density (BMD) of the lumbar spine (L2-4) and whole femur was measured by DXA at baseline and at 3, 6, 9, 12, 15, and 18 months under ketamine sedation. [1]
Prior to necropsy at 18 months, bone formation was labeled by intravenous administration of calcein (4 mg/kg) on a schedule (label, 14-day interval, label, 7-day interval, necropsy). [1]
At necropsy, the second lumbar vertebra and right femur were collected, fixed in 70% ethanol, and processed for static and dynamic bone histomorphometry to assess parameters such as mineralizing surface/bone surface (MS/BS), mineral apposition rate (MAR), and bone formation rate/bone surface (BFR/BS). [1]

A total of 100 adult female cynomolgus monkeys (Macaca fascicularis) aged 11-13 years were used. Eighty animals underwent bilateral ovariectomy (Ovx), and 20 underwent sham surgery. Ovx animals were divided into four groups: vehicle control (Group O), and three Balicatib treatment groups receiving 3 (Low, L), 10 (Medium, M), or 50/30 (High, H) mg/kg/day. The high dose was reduced from 50 to 30 mg/kg/day approximately 1 month after initiation due to reduced food consumption. [1]
Balicatib (AAE581 maleate) was dissolved in sterile water. Dose solutions were prepared weekly and refrigerated. The compound was administered orally twice daily via nasogastric intubation, starting the day after surgery, for 18 months. [1]
Bone mineral density (BMD) of the lumbar spine (L2-4) and whole femur was measured by DXA at baseline and at 3, 6, 9, 12, 15, and 18 months under ketamine sedation. [1]
Prior to necropsy at 18 months, bone formation was labeled by intravenous administration of calcein (4 mg/kg) on a schedule (label, 14-day interval, label, 7-day interval, necropsy). [1]
At necropsy, the second lumbar vertebra and right femur were collected, fixed in 70% ethanol, and processed for static and dynamic bone histomorphometry to assess parameters such as mineralizing surface/bone surface (MS/BS), mineral apposition rate (MAR), and bone formation rate/bone surface (BFR/BS). [1]
ADME/Pharmacokinetics
Balicatib is a lysosomal affinity compound. Its basicity and lipophilicity allow it to accumulate in lysosomes (pH 4-5), thereby enhancing its apparent activity against non-targeting cathepsins in lysosomes in cell experiments. [2]
Toxicity/Toxicokinetics
In the high-dose group (50 mg/kg/day), food intake decreased sharply after the start of administration, reaching its lowest point in week 4, leading to a reduction in the dose to 30 mg/kg/day. [1]
During the study, the high-dose group showed significantly less weight gain than the ovariectomized control group. [1]
One animal in the high-dose group died at 16 months due to clinical symptoms of hind limb paralysis. Retrospective analysis showed that the animal had abnormalities such as elevated serum osteocalcin and CTx levels and persistent vertebral bone loss since baseline. [1]
In the high-dose group (50 mg/kg/day), food intake decreased sharply after the start of administration, reaching its lowest point in week 4, leading to a reduction in the dose to 30 mg/kg/day. [1]
During the study, the high-dose group showed significantly less weight gain than the ovariectomized control group. [1]
One animal in the high-dose group died at 16 months due to clinical symptoms of hind limb paralysis. Retrospective analysis showed that the animal had consistently elevated serum osteocalcin and CTx levels and persistent vertebral bone loss since baseline. [1]
References

[1]. Balicatib, a cathepsin K inhibitor, stimulates periosteal bone formation in monkeys. Osteoporos Int. 2012 Jan;23(1):339-49.

[2]. The discovery of odanacatib (MK-0822), a selective inhibitor of cathepsin K. Bioorg Med Chem Lett. 2008 Feb 1;18(3):923-8.

Additional Infomation
Balicatib has been used in clinical trials for the treatment of osteoporosis and knee osteoarthritis.
Baricarinib is a cathepsin K inhibitor that was originally developed for the treatment of osteoporosis. Unlike most bone resorption inhibitors, such as bisphosphonates, Balicatib showed a unique ability to stimulate periosteal bone formation in this long-term primate study, suggesting that it may have anabolic properties in addition to its anti-resorption effects. [1]
This study suggests that Balicatib’s stimulatory effect on periosteal bone formation, combined with its weak inhibitory effect on intracortical bone formation in the femur, may explain why Balicatib is more effective at increasing femoral bone mass than vertebral bone mass. [1]
Baricarinib is a cathepsin K inhibitor that was originally developed for the treatment of osteoporosis. Unlike most bone resorption inhibitors (such as bisphosphonates), balicatib demonstrated a unique ability to stimulate periosteal bone formation in this long-term primate study, suggesting that it may also have anabolic properties in addition to its anti-bone resorption effects. [1]
This study suggests that balicatib's stimulatory effect on periosteal bone formation, combined with its weak inhibitory effect on intracortical bone formation in the femur, may explain why balicatib is more effective in increasing femoral bone mass than in increasing vertebral bone mass. [1]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C23H33N5O2
Molecular Weight
411.5404
Exact Mass
411.263
Elemental Analysis
C, 67.12; H, 8.08; N, 17.02; O, 7.78
CAS #
354813-19-7
Related CAS #
354813-19-7
PubChem CID
10201696
Appearance
white to off-white solid powder
Density
1.2±0.1 g/cm3
Boiling Point
687.4±55.0 °C at 760 mmHg
Flash Point
369.5±31.5 °C
Vapour Pressure
0.0±2.1 mmHg at 25°C
Index of Refraction
1.590
LogP
1.56
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
7
Heavy Atom Count
30
Complexity
621
Defined Atom Stereocenter Count
0
SMILES
O=C(C1(C([H])([H])C([H])([H])C([H])([H])C([H])([H])C1([H])[H])N([H])C(C1C([H])=C([H])C(=C([H])C=1[H])N1C([H])([H])C([H])([H])N(C([H])([H])C([H])([H])C([H])([H])[H])C([H])([H])C1([H])[H])=O)N([H])C([H])([H])C#N
InChi Key
LLCRBOWRJOUJAE-UHFFFAOYSA-N
InChi Code
InChI=1S/C23H33N5O2/c1-2-14-27-15-17-28(18-16-27)20-8-6-19(7-9-20)21(29)26-23(10-4-3-5-11-23)22(30)25-13-12-24/h6-9H,2-5,10-11,13-18H2,1H3,(H,25,30)(H,26,29)
Chemical Name
N-[1-(cyanomethylcarbamoyl)cyclohexyl]-4-(4-propylpiperazin-1-yl)benzamide
Synonyms
Balicatib; AAE-581; AAE 581; AAE581
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 75~82 mg/mL (182.2~199.3 mM)
Ethanol: ~3 mg/mL (~7.3 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 3.75 mg/mL (9.11 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 37.5 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 3.75 mg/mL (9.11 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 37.5 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.4299 mL 12.1495 mL 24.2990 mL
5 mM 0.4860 mL 2.4299 mL 4.8598 mL
10 mM 0.2430 mL 1.2149 mL 2.4299 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

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Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT00371670 Recruiting Drug: balicatib
(AAE581)
Knee Osteoarthritis Novartis Pharmaceuticals December 2004 Phase 2
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