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Ataluren (PTC124)

Alias: PTC124; Ataluren; PTC 124; PTC-124
Cat No.:V1688 Purity: ≥98%
Ataluren (formerly known as PTC 124; PTC-124;PTC124; trade name Translarna) is a novel, potent and orally bioavailableCFTR-G542Xnonsense allele inhibitor that has been approved asa medication for the treatment of Duchenne muscular dystrophy.
Ataluren (PTC124)
Ataluren (PTC124) Chemical Structure CAS No.: 775304-57-9
Product category: Calcium Channel
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

Ataluren (formerly known as PTC 124; PTC-124; PTC124; trade name Translarna) is a novel, potent and orally bioavailable CFTR-G542X nonsense allele inhibitor that has been approved as a medication for the treatment of Duchenne muscular dystrophy. It selectively induces ribosomal read-through of premature but not normal termination codons with EC50 of 0.1 μM in HEK293 cells, may provide treatment for genetic disorders caused by nonsense mutations (e.g. CF caused by CFTR nonsense mutation). Ataluren is currently being investigated for use in patients with nonsense mutation Duchenne/Becker muscular dystrophy (nmDBMD) and cystic fibrosis (nmCF).

Biological Activity I Assay Protocols (From Reference)
ln Vitro
This premature “stop” signal (a class I mutation) stops the cell from manufacturing a full-length CFTR protein[1]. Ataluren (PTC124)-a novel chemical entity that selectively stimulates ribosomal readthrough of premature but not normal termination codons[2].
ln Vivo
After 2–8 weeks of medication exposure, ataluren (PTC124) activity, which was optimized using nonsense-containing reporters, rescues striated muscle function in mdx mice and increases the production of dystrophin in primary muscle cells from humans and mdx mice expressing dystrophin nonsense alleles. In animals, ataluren (PTC124) is well tolerated at plasma exposures significantly higher than those needed for nonsense suppression[2]. Male Cln1R151X mice are injected intraperitoneally (ip) with the read-through drug Ataluren (PTC124) at two months of age in order to increase PPT1 enzyme activity and induce nonsense suppression. In a proof-of-principle study, these treatments are given four times a day for two days in a row. When Ataluren (PTC124) was used at a dose of 10 mg/kg, it was found to increase PPT1 enzyme activity (P=0.0001 by unpaired t-test) and protein level (P=0.0014 by unpaired t-test) in the liver, but not in the cortex. The probable cause of this tissue-specific effect is Ataluren (PTC124)'s incapacity to cross the blood brain barrier (BBB), which reduced the drug's bioavailability in the brain and kept it from building up to an effective concentration during the therapeutic window[3].
Animal Protocol
Dissolved in DMSO, and diluted in saline; 60 mg/kg/day; s.c. injection or oral administration
Cftr-/- hCFTR-G542X transgenic mice
ADME/Pharmacokinetics
Absorption, Distribution and Excretion
Peak plasma levels of ataluren are attained approximately 1.5 hours after dosing in subjects who received medicinal product within 30 minutes of a meal.
After a single oral dose of radiolabeled ataluren, approximately half of the administered radioactive dose is recovered in the faeces and the remainder was recovered in the urine. In the urine, unchanged ataluren and the acyl glucuronide metabolite account for less than 1% and 49%, respectively, of the administered dose.
Metabolism / Metabolites
Ataluren is metabolized by conjugation via uridine diphosphate glucuronosyltransferase (UGT) enzymes, predominantly UGT1A9 in liver and intestine. In vivo, the only metabolite detected in plasma after oral administration of radio-labelled ataluren was the ataluren-O-1β-acyl glucuronide; exposure to this metabolite in humans was approximately 8% of the plasma AUC of ataluren.
Biological Half-Life
Ataluren plasma half-life ranges from 2-6 hours and is unaffected either by dose or repeated administration.
Toxicity/Toxicokinetics
Protein Binding
Ataluren is 99.6% bound to human plasma proteins and the binding is independent of plasma concentration. Ataluren does not distribute into red blood cells.
References

[1]. CFTR Modulators for the Treatment of Cystic Fibrosis. P T. 2014 Jul;39(7):500-11.

[2]. PTC124 targets genetic disorders caused by nonsense mutations. Nature, 2007, 447(7140), 87-91.

[3]. The novel Cln1(R151X) mouse model of infantile neuronal ceroid lipofuscinosis (INCL) for testing nonsense suppression therapy. Hum Mol Genet. 2015 Jan 1;24(1):185-96.

Additional Infomation
3-[5-(2-fluorophenyl)-1,2,4-oxadiazol-3-yl]benzoic acid is a ring assembly and an oxadiazole.
Ataluren is a novel, orally administered drug that targets nonsense mutations. Ataluren is approved for use by the European Medicines Agency to treat Duchenne Muscular Dystrophy in patients aged 5 years and older who are able to walk. More specifically, ataluren is used in the small group of patients whose disease is caused by a specific genetic defect (called a ‘nonsense mutation’) in the dystrophin gene. This drug does not yet have approval by the US Food and Drug Administration or by Health Canada for any indications.
Drug Indication
Ataluren is approved for use by the European Medicines Agency to treat Duchenne Muscular Dystrophy in patients aged 5 years and older who are able to walk. More specifically, ataluren is used in the small group of patients whose disease is caused by a specific genetic defect (called a ‘nonsense mutation’) in the dystrophin gene.
Translarna is indicated for the treatment of Duchenne muscular dystrophy resulting from a nonsense mutation in the dystrophin gene, in ambulatory patients aged 2 years and older. Efficacy has not been demonstrated in non-ambulatory patients. The presence of a nonsense mutation in the dystrophin gene should be determined by genetic testing.
Treatment of dystrophinopathy
Treatment of cystic fibrosis
Mechanism of Action
Ataluren enables ribosomal readthrough of mRNA containing premature stop codons that otherwise would result in premature termination of protein chains. Use of ataluren allows cellular machinery to bypass nonsense mutations in genetic material, continue the translation process, and thereby restore the production of a full-length, functional protein. The research on the effects of Ataluren on the translation and stability of nonsense-containing mRNA in vitor show that Ataluren promoted readthrough at each of the nonsense codons, showing maximal activity with UGA, while having no effect on mRNA levels. Unlike the stable cell line assays, Ataluren did not discriminate significantly between the UAG and UAA mRNAs. Ataluren was a more potent nonsense-suppressing agent than gentamicin, and exhibited 4- to 15-fold stimulation of in vitro readthrough relative to the controls at levels similar to those in the stable cell reporter assays. These results indicate that Ataluren modulates termination efficiency at premature nonsense codons.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C15H9FN2O3
Molecular Weight
284.24
Exact Mass
284.059
CAS #
775304-57-9
Related CAS #
775304-57-9
PubChem CID
11219835
Appearance
White to off-white solid powder
Density
1.4±0.1 g/cm3
Boiling Point
503.7±60.0 °C at 760 mmHg
Flash Point
258.4±32.9 °C
Vapour Pressure
0.0±1.4 mmHg at 25°C
Index of Refraction
1.604
LogP
3.73
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
3
Heavy Atom Count
21
Complexity
382
Defined Atom Stereocenter Count
0
InChi Key
OOUGLTULBSNHNF-UHFFFAOYSA-N
InChi Code
InChI=1S/C15H9FN2O3/c16-12-7-2-1-6-11(12)14-17-13(18-21-14)9-4-3-5-10(8-9)15(19)20/h1-8H,(H,19,20)
Chemical Name
3-[5-(2-fluorophenyl)-1,2,4-oxadiazol-3-yl]benzoic acid
Synonyms
PTC124; Ataluren; PTC 124; PTC-124
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 57 mg/mL (200.5 mM)
Water:<1 mg/mL
Ethanol:<1 mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: 2.5 mg/mL (8.80 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (7.32 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

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Solubility in Formulation 3: (saturation unknown) in 1% DMSO +30% polyethylene glycol+1% Tween 80 : 30mg/mL (add these co-solvents sequentially from left to right, and one by one),
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.5182 mL 17.5908 mL 35.1815 mL
5 mM 0.7036 mL 3.5182 mL 7.0363 mL
10 mM 0.3518 mL 1.7591 mL 3.5182 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
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Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
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Clinical Trial Information
Study of Ataluren in Previously Treated Participants With Nonsense Mutation Dystrophinopathy (nmDBMD)
CTID: NCT01247207
Phase: Phase 3    Status: Enrolling by invitation
Date: 2024-10-09
A Study to Evaluate the Safety and Pharmacokinetics of Ataluren in Participants From ≥6 Months to <2 Years of Age With Nonsense Mutation Duchenne Muscular Dystrophy (nmDMD)
CTID: NCT04336826
Phase: Phase 2    Status: Completed
Date: 2024-04-01
Long-Term Outcomes of Ataluren in Duchenne Muscular Dystrophy
CTID: NCT03179631
Phase: Phase 3    Status: Completed
Date: 2024-01-18
Ataluren for Nonsense Mutation in CDKL5 and Dravet Syndrome
CTID: NCT02758626
Phase: Phase 2    Status: Completed
Date: 2023-02-16
Pembrolizumab With Ataluren in Patients With Metastatic pMMR and dMMR Colorectal Carcinoma or Metastatic dMMR Endometrial Carcinoma: the ATAPEMBRO Study
CTID: NCT04014530
Phase: Phase 1/Phase 2    Status: Recruiting
Date: 2023-02-01
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Study of Ataluren in Participants With Nonsense Mutation Aniridia
CTID: NCT02647359
Phase: Phase 2    Status: Completed
Date: 2022-05-27


A Study to Assess Dystrophin Levels in Participants With Nonsense Mutation Duchenne Muscular Dystrophy (nmDMD)
CTID: NCT03648827
Phase: Phase 2    Status: Completed
Date: 2022-04-05
A Study to Assess Dystrophin Levels in Participants With Nonsense Mutation Duchenne Muscular Dystrophy (nmDMD) Who Have Been Treated With Ataluren
CTID: NCT03796637
Phase: Phase 2    Status: Completed
Date: 2022-04-05
Study of Ataluren for Previously Treated Participants With Nonsense Mutation Duchenne/Becker Muscular Dystrophy (nmDBMD) in Europe, Israel, Australia, and Canada
CTID: NCT01557400
Phase: Phase 3    Status: Completed
Date: 2020-11-25
Phase 2a Extension Study of Ataluren (PTC124) in Duchenne Muscular Dystrophy (DMD)
CTID: NCT00759876
Phase: Phase 2    Status: Terminated
Date: 2020-10-29
Extension Study of Ataluren (PTC124) in Cystic Fibrosis
CTID: NCT01140451
Phase: Phase 3    Status: Completed
Date: 2020-10-19
Study of Ataluren in ≥2 to <5 Year-Old Male Participants With Duchenne Muscular Dystrophy
CTID: NCT02819557
Phase: Phase 2    Status: Completed
Date: 2020-08-28
--------------------------
An Open-Label Safety and Efficacy Study for Patients with Nonsense Mutation Cystic Fibrosis Previously Treated with Ataluren (PTC124®)
CTID: null
Phase: Phase 3    Status: Prematurely Ended, Completed
Date: 2014-08-26
A Phase 3 Extension Study of Ataluren (PTC124) in Patients with Nonsense Mutation Dystrophinopathy
CTID: null
Phase: Phase 3    Status: Completed
Date: 2014-08-22
A Phase 3 Efficacy and Safety Study of Ataluren (PTC124) in Patients with Nonsense Mutation Dystrophinopathy
CTID: null
Phase: Phase 3    Status: Completed
Date: 2013-07-30
An Open-Label Study for Previously Treated Ataluren (PTC124®) Patients with Nonsense Mutation Dystrophinopathy
CTID: null
Phase: Phase 3    Status: Completed
Date: 2012-04-27
A Phase 2a Study of Ataluren (PTC124) as an Oral Treatment for Nonsense-Mutation-Mediated Hemophilia A and B
CTID: null
Phase: Phase 2    Status: Completed
Date: 2010-08-26
A Phase 3 Extension Study of Ataluren (PTC124) in Subjects with Nonsense-Mutation-Mediated Cystic Fibrosis
CTID: null
Phase: Phase 3    Status: Completed
Date: 2010-08-10
A Phase 2 Study of Ataluren (PTC124) as an Oral Treatment for Nonsense Mutation Methylmalonic Acidemia
CTID: null
Phase: Phase 2    Status: Prematurely Ended, Completed
Date: 2010-03-02
A Phase 2a Study of Ataluren (PTC124) in Nonambulatory Patients with Nonsense–Mutation-Mediated Duchenne/Becker Muscular Dystrophy
CTID: null
Phase: Phase 2    Status: Prematurely Ended
Date: 2010-01-19
A Phase 2b Extension Study of PTC124 in Subjects with Nonsense–
CTID: null
Phase: Phase 2    Status: Prematurely Ended, Completed
Date: 2009-04-14
A Phase 3 Efficacy and Safety Study of PTC124 as an Oral Treatment for Nonsense-Mutation-Mediated Cystic Fibrosis
CTID: null
Phase: Phase 3    Status: Completed
Date: 2009-04-08
A Phase 2b Efficacy and Safety Study of PTC124 in Subjects with Nonsense-Mutation-Mediated Duchenne and Becker Muscular Dystrophy
CTID: null
Phase: Phase 2    Status: Completed
Date: 2008-03-17
A Phase 2 Study of PTC124 as an Oral Treatment for Nonsense-Mutation-Mediated Cystic Fibrosis
CTID: null
Phase: Phase 2    Status: Completed
Date: 2007-09-27

Biological Data
  • Ataluren (PTC124)

    Immunofluorescence of hCFTR in the submucosal glands of intestinal tissues from mice fed a liquid diet containing PTC124. Proc Natl Acad Sci U S A. 2008 Feb 12;105(6):2064-9.
  • Ataluren (PTC124)

    RT-PCR detection of hCFTR mRNA in untreated Cftr−/− hCFTR-G542X mice and Cftr−/− hCFTR-G542X mice treated with an oral dose of 0.9 mg/ml PTC124. Proc Natl Acad Sci U S A. 2008 Feb 12;105(6):2064-9.
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