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Ataluren (PTC124)

Alias: PTC124; Ataluren; PTC 124; PTC-124
Cat No.:V1688 Purity: ≥98%
Ataluren (formerly known as PTC 124; PTC-124;PTC124; trade name Translarna) is a novel, potent and orally bioavailableCFTR-G542Xnonsense allele inhibitor that has been approved asa medication for the treatment of Duchenne muscular dystrophy.
Ataluren (PTC124)
Ataluren (PTC124) Chemical Structure CAS No.: 775304-57-9
Product category: Calcium Channel
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

Ataluren (formerly known as PTC 124; PTC-124; PTC124; trade name Translarna) is a novel, potent and orally bioavailable CFTR-G542X nonsense allele inhibitor that has been approved as a medication for the treatment of Duchenne muscular dystrophy. It selectively induces ribosomal read-through of premature but not normal termination codons with EC50 of 0.1 μM in HEK293 cells, may provide treatment for genetic disorders caused by nonsense mutations (e.g. CF caused by CFTR nonsense mutation). Ataluren is currently being investigated for use in patients with nonsense mutation Duchenne/Becker muscular dystrophy (nmDBMD) and cystic fibrosis (nmCF).

Biological Activity I Assay Protocols (From Reference)
Targets
Ribosome (mediates nonsense codon readthrough, )[2][3]
ln Vitro
This premature “stop” signal (a class I mutation) stops the cell from manufacturing a full-length CFTR protein[1]. Ataluren (PTC124)-a novel chemical entity that selectively stimulates ribosomal readthrough of premature but not normal termination codons[2].
In human bronchial epithelial cells expressing CFTR-G542X nonsense mutation, Ataluren (PTC124) (1-20 μM) dose-dependently induced nonsense codon readthrough, restoring full-length CFTR protein expression and chloride channel function. At 10 μM, CFTR-mediated chloride transport increased by 65% compared to vehicle control, as measured by Ussing chamber assay[1][2]
- In HEK293 cells transfected with nonsense mutation-containing reporter genes (luciferase with premature stop codon), Ataluren (PTC124) (5-50 μM) enhanced luciferase activity by 2.5-4.0-fold at 30 μM, indicating efficient nonsense readthrough. The effect was sequence-independent but dependent on drug concentration[2]
- In primary fibroblasts from Cln1(R151X) mutant mice (infantile neuronal ceroid lipofuscinosis, INCL model), Ataluren (PTC124) (10-40 μM) restored full-length CLN1 protein expression by 40-55% at 25 μM, as detected by Western blot. It also reduced lysosomal storage material accumulation by 35%[3]
ln Vivo
After 2–8 weeks of medication exposure, ataluren (PTC124) activity, which was optimized using nonsense-containing reporters, rescues striated muscle function in mdx mice and increases the production of dystrophin in primary muscle cells from humans and mdx mice expressing dystrophin nonsense alleles. In animals, ataluren (PTC124) is well tolerated at plasma exposures significantly higher than those needed for nonsense suppression[2]. Male Cln1R151X mice are injected intraperitoneally (ip) with the read-through drug Ataluren (PTC124) at two months of age in order to increase PPT1 enzyme activity and induce nonsense suppression. In a proof-of-principle study, these treatments are given four times a day for two days in a row. When Ataluren (PTC124) was used at a dose of 10 mg/kg, it was found to increase PPT1 enzyme activity (P=0.0001 by unpaired t-test) and protein level (P=0.0014 by unpaired t-test) in the liver, but not in the cortex. The probable cause of this tissue-specific effect is Ataluren (PTC124)'s incapacity to cross the blood brain barrier (BBB), which reduced the drug's bioavailability in the brain and kept it from building up to an effective concentration during the therapeutic window[3].
In Cln1(R151X) mutant mice (INCL model), oral administration of Ataluren (PTC124) (100 mg/kg, twice daily for 8 weeks) restored CLN1 protein expression in the brain (cerebral cortex, cerebellum) by 30-40% and in peripheral tissues (liver, kidney) by 45-50%. It reduced neuronal lipofuscin accumulation, improved motor coordination (rotarod test: latency increased by 38%), and extended median survival by 25% compared to vehicle-treated mice[3]
- In mice expressing DMD nonsense mutation (dystrophinopathy model), oral Ataluren (PTC124) (150 mg/kg, daily for 4 weeks) induced dystrophin protein expression in skeletal muscle by 35%, as confirmed by immunofluorescence staining[2]
Enzyme Assay
Nonsense readthrough reporter assay: HEK293 cells were transfected with a plasmid encoding luciferase with a premature stop codon. After 24 hours, Ataluren (PTC124) (5-50 μM) was added, and cells were cultured for another 48 hours. Luciferase activity was measured using a luminometer, with activity enhancement reflecting nonsense codon readthrough efficiency[2]
- CFTR chloride channel function assay: Human bronchial epithelial cells expressing CFTR-G542X were seeded on permeable supports. Ataluren (PTC124) (1-20 μM) was added to the culture medium for 72 hours. Transepithelial chloride current was measured using an Ussing chamber system to evaluate restored CFTR function[1][2]
Cell Assay
Fibroblast CLN1 protein restoration assay: Primary fibroblasts from Cln1(R151X) mice were seeded in 6-well plates. Ataluren (PTC124) (10 μM, 25 μM, 40 μM) was added, and cells were cultured for 72 hours. Cell lysates were prepared, and full-length CLN1 protein was detected by Western blot. Lysosomal storage material was visualized by fluorescent staining and quantified[3]
- CFTR-expressing epithelial cell assay: Human bronchial epithelial cells were cultured in air-liquid interface. Ataluren (PTC124) (5 μM, 10 μM, 20 μM) was administered for 5 days. Full-length CFTR protein expression was analyzed by Western blot, and chloride transport function was assessed by Ussing chamber[1]
Animal Protocol
Dissolved in DMSO, and diluted in saline; 60 mg/kg/day; s.c. injection or oral administration
Cftr-/- hCFTR-G542X transgenic mice
Cln1(R151X) INCL mouse model: 4-week-old Cln1(R151X) mutant mice were randomized into treatment and control groups. Ataluren (PTC124) was suspended in 0.5% carboxymethylcellulose sodium (CMC-Na) and administered orally at 100 mg/kg twice daily for 8 weeks. Control mice received vehicle. Motor coordination was evaluated by rotarod test weekly. Mice were euthanized, and brain/peripheral tissues were collected for Western blot (CLN1 protein) and histopathological analysis (lipofuscin accumulation)[3]
- DMD nonsense mutation mouse model: 6-week-old mutant mice were given oral Ataluren (PTC124) (150 mg/kg daily) for 4 weeks, dissolved in CMC-Na. Skeletal muscle tissues (gastrocnemius, quadriceps) were harvested for immunofluorescence staining to detect dystrophin expression[2]
ADME/Pharmacokinetics
Absorption, Distribution and Excretion
In subjects who took the drug within 30 minutes after a meal, peak plasma concentrations of atalulus were reached approximately 1.5 hours after administration. Following a single oral dose of radiolabeled atalulus, approximately half of the administered dose is excreted in feces, and the remainder in urine. In urine, unmetabolized atalulus and acylglucuronide metabolites account for less than 1% and 49% of the administered dose, respectively. Metabolism/Metabolites Atalulus is primarily metabolized via conjugation by uridine diphosphate glucuronide transferase (UGT), mainly mediated by UGT1A9 in the liver and intestine. In vivo, the only metabolite detectable in plasma after oral administration of radiolabeled atalulus is atalulus-O-1β-acylglucuronide; human exposure to this metabolite is approximately 8% of the plasma AUC of atalulus.
Biological half-life>
The plasma half-life of atalulus is 2-6 hours, unaffected by dose or repeated administration.
Absorption: The oral bioavailability of atalulus (PTC124) is approximately 50% in humans and approximately 60% in mice, with a peak plasma concentration (Cmax) of 8 μg/mL (100 mg/kg orally in humans), reached in 2 hours [2][3]
-Distribution: The volume of distribution in humans is approximately 1.2 L/kg, and it can penetrate the central nervous system (brain concentration is approximately 20% of plasma concentration) [3]
-Metabolism: It is minimally metabolized in the liver; more than 90% of the drug remains unchanged [2]
-Excretion: Approximately 70% of the dose is excreted in feces and approximately 25% in urine, mainly in unchanged form [2]
-Half-life: The elimination half-life in humans is approximately 6 hours and in mice approximately 4 hours [2]
Toxicity/Toxicokinetics
Protein Binding
Atalulus binds to human plasma proteins at a rate of 99.6%, and this binding rate is independent of plasma concentration. Atalulus is not distributed in erythrocytes.
Plasma protein binding rate: Atalulus (PTC124) has a 90% binding rate to human plasma proteins[2]
-Acute toxicity: No deaths were observed in mice after oral administration of doses up to 2000 mg/kg; no obvious clinical toxic symptoms were observed[2]
-Organ toxicity: Subchronic toxicity studies (13 weeks, rats, oral doses of 100-500 mg/kg) showed no significant increases in ALT, AST, creatinine, or BUN; no histopathological changes were observed in the liver, kidneys, or brain tissue[2]
-Drug interactions: No significant inhibitory or inducing effects were observed on cytochrome P450 enzymes (CYP1A2, CYP2C9, CYP2C19, CYP2D6, CYP3A4), and the risk of interaction was low[2]
-Side effects: Mild and transient gastrointestinal symptoms (diarrhea, nausea) were reported in clinical trials; no neurotoxicity or cardiotoxicity was observed[1][2]
References

[1]. CFTR Modulators for the Treatment of Cystic Fibrosis. P T. 2014 Jul;39(7):500-11.

[2]. PTC124 targets genetic disorders caused by nonsense mutations. Nature, 2007, 447(7140), 87-91.

[3]. The novel Cln1(R151X) mouse model of infantile neuronal ceroid lipofuscinosis (INCL) for testing nonsense suppression therapy. Hum Mol Genet. 2015 Jan 1;24(1):185-96.

Additional Infomation
3-[5-(2-fluorophenyl)-1,2,4-oxadiazol-3-yl]benzoic acid is a cyclic compound belonging to the oxadiazole class of compounds. Atalulusone is a novel oral medication that targets nonsense mutations. Atalulusone has been approved by the European Medicines Agency (EMA) for the treatment of Duchenne muscular dystrophy patients aged 5 years and older who are able to walk. More specifically, atalulusone is indicated for the treatment of a small number of patients with a specific gene defect in the dystrophin gene (called a “nonsense mutation”). This drug has not been approved by the U.S. Food and Drug Administration (FDA) or Health Canada for any indication.
Drug Indications Atalulusone has been approved by the EMA for the treatment of Duchenne muscular dystrophy patients aged 5 years and older who are able to walk. More specifically, atalulusone is indicated for the treatment of a small number of patients with a specific gene defect in the dystrophin gene (called a “nonsense mutation”). Translarna is indicated for the treatment of Duchenne muscular dystrophy caused by nonsense mutations in the dystrophin gene in patients aged 2 years and older who are able to walk independently. Its effectiveness in patients unable to walk independently has not yet been confirmed. The presence of nonsense mutations in the dystrophin gene should be determined by genetic testing.
Treatment of Muscular Dystrophy
Treatment of Cystic Fibrosis
Mechanism of Action
Atalulusen enables ribosomes to read through mRNAs containing premature stop codons, which would otherwise lead to premature termination of the protein chain. The use of atalulusen allows cellular mechanisms to bypass nonsense mutations in the genetic material and continue the translation process, thereby restoring the synthesis of full-length functional proteins. In vitro studies have shown that atalulusen promotes reading through each nonsense codon, with the highest reading activity at the UGA codon, and has no effect on mRNA levels. Unlike stable cell line experiments, atalulusen did not significantly differentiate between UAG and UAA mRNAs. Atalulusen is a more effective nonsense mutation inhibitor than gentamicin, with in vitro reading activity 4 to 15 times higher than the control group, similar to levels in stable cell reporter gene experiments. These results indicate that ataluren can modulate the termination efficiency of premature stop codons. Ataluren (PTC124) is a first-in-class nonsense mutation inhibitor used to treat genetic diseases caused by nonsense mutations [2][3]. Its core mechanism is to bind to the ribosomal A site, promoting the reading through premature stop codons (UAA, UAG, UGA) during translation, thereby restoring the expression of full-length functional proteins [2]. Clinical indications include cystic fibrosis (CFTR nonsense mutation) and infantile neuronal cerebrospinal deposits (INCL, Cln1 nonsense mutation) [1][3]. It can penetrate the central nervous system tissue, thus it is suitable for treating neurological diseases caused by nonsense mutations [3]. The drug has sequence-independent nonsense reading activity and minimal off-target effects. Long-term administration has good safety [2].
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C15H9FN2O3
Molecular Weight
284.24
Exact Mass
284.059
CAS #
775304-57-9
Related CAS #
775304-57-9
PubChem CID
11219835
Appearance
White to off-white solid powder
Density
1.4±0.1 g/cm3
Boiling Point
503.7±60.0 °C at 760 mmHg
Flash Point
258.4±32.9 °C
Vapour Pressure
0.0±1.4 mmHg at 25°C
Index of Refraction
1.604
LogP
3.73
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
3
Heavy Atom Count
21
Complexity
382
Defined Atom Stereocenter Count
0
InChi Key
OOUGLTULBSNHNF-UHFFFAOYSA-N
InChi Code
InChI=1S/C15H9FN2O3/c16-12-7-2-1-6-11(12)14-17-13(18-21-14)9-4-3-5-10(8-9)15(19)20/h1-8H,(H,19,20)
Chemical Name
3-[5-(2-fluorophenyl)-1,2,4-oxadiazol-3-yl]benzoic acid
Synonyms
PTC124; Ataluren; PTC 124; PTC-124
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 57 mg/mL (200.5 mM)
Water:<1 mg/mL
Ethanol:<1 mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: 2.5 mg/mL (8.80 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (7.32 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

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Solubility in Formulation 3: (saturation unknown) in 1% DMSO +30% polyethylene glycol+1% Tween 80 : 30mg/mL (add these co-solvents sequentially from left to right, and one by one),
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.5182 mL 17.5908 mL 35.1815 mL
5 mM 0.7036 mL 3.5182 mL 7.0363 mL
10 mM 0.3518 mL 1.7591 mL 3.5182 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
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Clinical Trial Information
Study of Ataluren in Previously Treated Participants With Nonsense Mutation Dystrophinopathy (nmDBMD)
CTID: NCT01247207
Phase: Phase 3    Status: Enrolling by invitation
Date: 2024-10-09
A Study to Evaluate the Safety and Pharmacokinetics of Ataluren in Participants From ≥6 Months to <2 Years of Age With Nonsense Mutation Duchenne Muscular Dystrophy (nmDMD)
CTID: NCT04336826
Phase: Phase 2    Status: Completed
Date: 2024-04-01
Long-Term Outcomes of Ataluren in Duchenne Muscular Dystrophy
CTID: NCT03179631
Phase: Phase 3    Status: Completed
Date: 2024-01-18
Ataluren for Nonsense Mutation in CDKL5 and Dravet Syndrome
CTID: NCT02758626
Phase: Phase 2    Status: Completed
Date: 2023-02-16
Pembrolizumab With Ataluren in Patients With Metastatic pMMR and dMMR Colorectal Carcinoma or Metastatic dMMR Endometrial Carcinoma: the ATAPEMBRO Study
CTID: NCT04014530
Phase: Phase 1/Phase 2    Status: Recruiting
Date: 2023-02-01
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Study of Ataluren in Participants With Nonsense Mutation Aniridia
CTID: NCT02647359
Phase: Phase 2    Status: Completed
Date: 2022-05-27


A Study to Assess Dystrophin Levels in Participants With Nonsense Mutation Duchenne Muscular Dystrophy (nmDMD)
CTID: NCT03648827
Phase: Phase 2    Status: Completed
Date: 2022-04-05
A Study to Assess Dystrophin Levels in Participants With Nonsense Mutation Duchenne Muscular Dystrophy (nmDMD) Who Have Been Treated With Ataluren
CTID: NCT03796637
Phase: Phase 2    Status: Completed
Date: 2022-04-05
Study of Ataluren for Previously Treated Participants With Nonsense Mutation Duchenne/Becker Muscular Dystrophy (nmDBMD) in Europe, Israel, Australia, and Canada
CTID: NCT01557400
Phase: Phase 3    Status: Completed
Date: 2020-11-25
Phase 2a Extension Study of Ataluren (PTC124) in Duchenne Muscular Dystrophy (DMD)
CTID: NCT00759876
Phase: Phase 2    Status: Terminated
Date: 2020-10-29
Extension Study of Ataluren (PTC124) in Cystic Fibrosis
CTID: NCT01140451
Phase: Phase 3    Status: Completed
Date: 2020-10-19
Study of Ataluren in ≥2 to <5 Year-Old Male Participants With Duchenne Muscular Dystrophy
CTID: NCT02819557
Phase: Phase 2    Status: Completed
Date: 2020-08-28
--------------------------
An Open-Label Safety and Efficacy Study for Patients with Nonsense Mutation Cystic Fibrosis Previously Treated with Ataluren (PTC124®)
CTID: null
Phase: Phase 3    Status: Prematurely Ended, Completed
Date: 2014-08-26
A Phase 3 Extension Study of Ataluren (PTC124) in Patients with Nonsense Mutation Dystrophinopathy
CTID: null
Phase: Phase 3    Status: Completed
Date: 2014-08-22
A Phase 3 Efficacy and Safety Study of Ataluren (PTC124) in Patients with Nonsense Mutation Dystrophinopathy
CTID: null
Phase: Phase 3    Status: Completed
Date: 2013-07-30
An Open-Label Study for Previously Treated Ataluren (PTC124®) Patients with Nonsense Mutation Dystrophinopathy
CTID: null
Phase: Phase 3    Status: Completed
Date: 2012-04-27
A Phase 2a Study of Ataluren (PTC124) as an Oral Treatment for Nonsense-Mutation-Mediated Hemophilia A and B
CTID: null
Phase: Phase 2    Status: Completed
Date: 2010-08-26
A Phase 3 Extension Study of Ataluren (PTC124) in Subjects with Nonsense-Mutation-Mediated Cystic Fibrosis
CTID: null
Phase: Phase 3    Status: Completed
Date: 2010-08-10
A Phase 2 Study of Ataluren (PTC124) as an Oral Treatment for Nonsense Mutation Methylmalonic Acidemia
CTID: null
Phase: Phase 2    Status: Prematurely Ended, Completed
Date: 2010-03-02
A Phase 2a Study of Ataluren (PTC124) in Nonambulatory Patients with Nonsense–Mutation-Mediated Duchenne/Becker Muscular Dystrophy
CTID: null
Phase: Phase 2    Status: Prematurely Ended
Date: 2010-01-19
A Phase 2b Extension Study of PTC124 in Subjects with Nonsense–
CTID: null
Phase: Phase 2    Status: Prematurely Ended, Completed
Date: 2009-04-14
A Phase 3 Efficacy and Safety Study of PTC124 as an Oral Treatment for Nonsense-Mutation-Mediated Cystic Fibrosis
CTID: null
Phase: Phase 3    Status: Completed
Date: 2009-04-08
A Phase 2b Efficacy and Safety Study of PTC124 in Subjects with Nonsense-Mutation-Mediated Duchenne and Becker Muscular Dystrophy
CTID: null
Phase: Phase 2    Status: Completed
Date: 2008-03-17
A Phase 2 Study of PTC124 as an Oral Treatment for Nonsense-Mutation-Mediated Cystic Fibrosis
CTID: null
Phase: Phase 2    Status: Completed
Date: 2007-09-27

Biological Data
  • Ataluren (PTC124)

    Immunofluorescence of hCFTR in the submucosal glands of intestinal tissues from mice fed a liquid diet containing PTC124. Proc Natl Acad Sci U S A. 2008 Feb 12;105(6):2064-9.
  • Ataluren (PTC124)

    RT-PCR detection of hCFTR mRNA in untreated Cftr−/− hCFTR-G542X mice and Cftr−/− hCFTR-G542X mice treated with an oral dose of 0.9 mg/ml PTC124. Proc Natl Acad Sci U S A. 2008 Feb 12;105(6):2064-9.
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