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Validamycin A (Jinggangmycin A)

Cat No.:V35147 Purity: ≥98%
Validamycin A is a fungicide and agricultural antibiotic originally extracted from Streptomyces hygroscopicus var. limoneus
Validamycin A (Jinggangmycin A)
Validamycin A (Jinggangmycin A) Chemical Structure CAS No.: 37248-47-8
Product category: Fungal
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
100mg
Other Sizes
Official Supplier of:
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Product Description
Validamycin A is a fungicide and agricultural antibiotic originally extracted from Streptomyces hygroscopicus var. limoneus. Validamycin A can suppress the growth of Aspergillus flavus, and its MIC is 1 μg/mL. Validamycin A has high inhibitory effect against alginase (trehalase) of Rhizoctonia solani, with IC50 of 72 μM. Validamycin A is a reversible tyrosinase inhibitor (antagonist) with a Ki of 5.893 mM.
Biological Activity I Assay Protocols (From Reference)
Targets
Antibiotic[1], IC50: 72 μM (trehalase)[2], Ki: 5.893 mM (tyrosinase)[3]
ln Vitro
Validamycin A (0.5–1 μg/mL; 18 hours) stops A from growing. conidial germination and inhibits flavus [1]. For human bronchial epithelial cells, validamycin A is not cytotoxic [1]. HIS85, HIS244, GLU256, HIS259, and ASN260 are among the residues in the tyrosinase active site that Validamycin A directly binds to [1].
Cell Assay
Cell Proliferation Assay[1]
Cell Types: Aspergillus flavus ATCC204304
Tested Concentrations: 0.5 μg/mL, 1 μg/mL
Incubation Duration: 18 hrs (hours)
Experimental Results: Inhibited the growth of Aspergillus flavus.
ADME/Pharmacokinetics
Metabolism / Metabolites
In animals, cleavage to glucose and an amine residue.
Biological Half-Life
Less than or equal to 5 hr
Toxicity/Toxicokinetics
Toxicity Data
LC50 (rat) > 5,000 mg/m3
Non-Human Toxicity Values
LD50 Rat oral > 20,000 mg/kg
LD50 Mice oral > 20,000 mg/kg
LD50 Rat percutaneous > 5000 mg/kg
References

[1]. The Inhibitory Effect of Validamycin A on Aspergillus flavus. Int J Microbiol. 2020; 2020: 3972415.

[2]. Effect of validamycins on glycohydrolases of Rhizoctonia solani. J Antibiot (Tokyo). 1987 Apr;40(4):526-32.

[3]. The effect of validamycin A on tyrosinase: inhibition kinetics and computational simulation. Int J Biol Macromol. 2013 Apr;55:15-23.

Additional Infomation
Validamycin A is a member of the class of validamycins that is (1R,2S,3S,4S,6R)-4-amino-6-(hydroxymethyl)cyclohexane-1,2,3-triol in which the hydroxy group at position 1 has been converted to its beta-D-glucoside and in which one of the hydrogens attached to the nitrogen is replaced by a (1R,4R,5R,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl group. It is the major validamycin produced by Streptomyces hygroscopicus. It has a role as an EC 2.4.1.231 [alpha,alpha-trehalose phosphorylase (configuration-retaining)] inhibitor, an EC 2.4.1.64 (alpha,alpha-trehalose phosphorylase) inhibitor, an EC 3.2.1.28 (alpha,alpha-trehalase) inhibitor and an antifungal agrochemical. It is a member of validamycins, a secondary amino compound, a polyol and an antibiotic fungicide. It is a conjugate base of a validamycin A(1+).
Validamycin A has been reported in Streptomyces anthocyanicus, Streptomyces hygroscopicus, and Streptomyces lividans with data available.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C20H35NO13
Molecular Weight
497.49
Exact Mass
497.21
CAS #
37248-47-8
PubChem CID
443629
Appearance
White to off-white solid powder
Density
1.7±0.1 g/cm3
Boiling Point
813.7±65.0 °C at 760 mmHg
Melting Point
130-135ºC
Flash Point
445.9±34.3 °C
Vapour Pressure
0.0±6.6 mmHg at 25°C
Index of Refraction
1.689
LogP
-5.43
Hydrogen Bond Donor Count
12
Hydrogen Bond Acceptor Count
14
Rotatable Bond Count
7
Heavy Atom Count
34
Complexity
697
Defined Atom Stereocenter Count
14
SMILES
C1[C@@H]([C@H]([C@@H]([C@H]([C@H]1N[C@H]2C=C([C@H]([C@@H]([C@H]2O)O)O)CO)O)O)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)CO
InChi Key
JARYYMUOCXVXNK-CSLFJTBJSA-N
InChi Code
InChI=1S/C20H35NO13/c22-3-6-1-8(12(26)15(29)11(6)25)21-9-2-7(4-23)19(17(31)13(9)27)34-20-18(32)16(30)14(28)10(5-24)33-20/h1,7-32H,2-5H2/t7-,8+,9+,10-,11-,12+,13+,14-,15+,16+,17-,18-,19-,20+/m1/s1
Chemical Name
(2R,3R,4S,5S,6R)-2-[(1R,2R,3S,4S,6R)-2,3-dihydroxy-6-(hydroxymethyl)-4-[[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino]cyclohexyl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: (1). This product requires protection from light (avoid light exposure) during transportation and storage.  (2). Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
H2O : 125 mg/mL (251.26 mM)
Solubility (In Vivo)
Solubility in Formulation 1: 100 mg/mL (201.01 mM) in PBS (add these co-solvents sequentially from left to right, and one by one), clear solution; with sonication.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.0101 mL 10.0505 mL 20.1009 mL
5 mM 0.4020 mL 2.0101 mL 4.0202 mL
10 mM 0.2010 mL 1.0050 mL 2.0101 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
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