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IMP-1088

Alias: IMP1088; IMP 1088; IMP-1088
Cat No.:V51950 Purity: ≥98%
IMP-1088 is a novel dual inhibitor of human N-myristoyltransferase NMT1 and NMT2 with IC50 of <1 nM for HsNMT1 and HsNMT2.
IMP-1088
IMP-1088 Chemical Structure CAS No.: 2059148-82-0
Product category: DNA(RNA) Synthesis
This product is for research use only, not for human use. We do not sell to patients.
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1mg
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Product Description
IMP-1088 is a novel dual inhibitor of human N-myristoyltransferase NMT1 and NMT2 with IC50 of <1 nM for HsNMT1 and HsNMT2. IMP-1088 has a Kd of less than 210 pM for HsNMT1. The rhinovirus's N-myristoylated protein (VP0) is blocked by IMP-1088, which effectively prevents rhinovirus replication. Due to its cytotoxic properties, IMP-1088 shields host cells against virus infection.
IMP-1088 (CAS 2059148-82-0) is a potent dual inhibitor of human N-myristoyltransferases NMT1 and NMT2, with an IC50 of <1 nM for both enzymes and a Kd of <210 pM for HsNMT1. It effectively inhibits the production of infectious rhinovirus virions by blocking the N-myristoylation of the rhinovirus VP0 protein. IMP-1088 has low nanomolar antiviral activity against multiple rhinovirus strains, poliovirus, and foot-and-mouth disease virus. It has a molecular formula of C25H29F2N5O and a molecular weight of 453.53 g/mol.
Biological Activity I Assay Protocols (From Reference)
Targets
HsNMT1 ( IC50 < 1 nM ); HsNMT2 ( IC50 < 1 nM ); HsNMT1 ( Kd < 210 pM )
IMP-1088 targets human N-myristoyltransferases NMT1 and NMT2, enzymes that catalyze the attachment of myristic acid to the N-terminus of proteins. This N-myristoylation is essential for the function of many viral proteins, including the rhinovirus capsid protein VP0. By potently inhibiting NMT1 and NMT2 with IC50 <1 nM and Kd <210 pM for HsNMT1, IMP-1088 blocks a key step in viral capsid assembly, preventing the production of infectious virus particles.
ln Vitro
IMP-1088 (1-1000 nM) has an IC50 of 17 nM and inhibits the virus-induced cytopathic effect (CPE) in a dose-dependent manner. With an IC50 of 5.8 nM, IMP-1088 (125 nM) completely inhibits novel infectious viruses. In primary human bronchial epithelial cells (hBEC) infected with rhinovirus RV-A1 (MOI 5), IMP-1088 (1-1000 nM) suppresses single cycle replication and stops the formation of infectious virus for a duration of 7 hours. Even when added up to three hours after infection, IMP-1088 dramatically reduces the generation of infectious viruses[1]. In enriched samples, IMP-1088 (50 nM) considerably reduces the enrichment of several N-myristoylated proteins[1]. By preventing virus assembly in HeLa cells infected with rhinovirus RV-A16 (MOI 20) for six hours, IMP-1088 (500 nM) reduces the generation of infectious rhinovirus particles[1]. NMT activity fully recovers in 24 hours and IMP-1088 (0.24 nM-1 µM; for 24 hours + 24 hours washout) has no long-term effect on cell viability[1]. IMP-1088 effectively inhibits co-translational myristoylation of a virus-specific encoded protein (VP0), hence blocking a crucial stage in viral capsid construction. IMP-1088 does not impede the translation of rhinovirus polyprotein or the synthesis of viral RNA[1].
In vitro, IMP-1088 demonstrates potent inhibition of NMT1 and NMT2 with IC50 <1 nM for both enzymes and Kd <210 pM for HsNMT1. At 1-1000 nM, it blocks the production of infectious virus in primary human bronchial epithelial cells infected with rhinovirus RV-A1 and inhibits single-cycle replication within 7 hours. It shows low nanomolar antiviral activity against multiple rhinovirus strains, poliovirus, and foot-and-mouth disease virus. IMP-1088 (500 nM) reduces RV-A16 replication in HeLa cells.
ln Vivo
In vivo data for IMP-1088 is limited in publicly available sources. As a potent NMT inhibitor with broad-spectrum antiviral activity against rhinoviruses and other picornaviruses, the compound has potential applications in animal models of viral respiratory infections. By blocking a key step in viral capsid assembly, IMP-1088 could provide a novel therapeutic approach for treating the common cold and other viral infections. However, specific published in vivo efficacy studies are not widely reported.
Enzyme Assay
The in vitro NMT inhibition assay for IMP-1088 uses recombinant human NMT1 and NMT2 enzymes and a peptide substrate. Enzyme activity is measured using radioactive or fluorescence-based detection methods, and IC50 values and Kd values are calculated from dose-response curves. Antiviral assays are performed in rhinovirus-infected cells, with viral replication measured by quantifying viral RNA, plaque formation, or cytopathic effect.
Cell Assay
Cellular assays for IMP-1088 are conducted in primary human bronchial epithelial cells and HeLa cells infected with rhinovirus. Cells are treated with IMP-1088 at concentrations of 1-1000 nM. Viral replication is measured by quantifying viral RNA, plaque formation, or cytopathic effect. Cell viability is assessed to confirm that antiviral activity is not due to cytotoxicity. The compound's effects on N-myristoylation of viral proteins are confirmed by Western blotting.
Animal Protocol
In vivo studies for IMP-1088 would typically involve animal models of rhinovirus or other picornavirus infections. The compound would be administered via oral or intranasal routes at doses determined by pharmacokinetic studies. Efficacy would be assessed by measuring viral loads in respiratory tissues, clinical signs of infection, and inflammatory responses. However, specific published in vivo protocols for IMP-1088 are not available in the current literature. The compound is currently used as a research tool.
ADME/Pharmacokinetics
Pharmacokinetic data for IMP-1088 is not extensively reported in publicly available sources. The compound has a molecular weight of 453.53 g/mol and a molecular formula of C25H29F2N5O. It is soluble in DMSO at 91 mg/mL and in ethanol at 30 mg/mL, but insoluble in water. As a small molecule NMT inhibitor, it is expected to have moderate bioavailability. Detailed PK parameters such as half-life are not available in the current literature.
Toxicity/Toxicokinetics
Toxicity data for IMP-1088 is limited in publicly available sources. As with all research compounds, IMP-1088 is intended for research use only and not for human therapeutic applications. The compound's potent inhibition of host NMTs suggests potential toxicity concerns that would need to be addressed. Standard in vitro cytotoxicity assays and in vivo tolerability studies would be required for a complete toxicity assessment.
References

[1]. Fragment-derived Inhibitors of Human N-myristoyltransferase Block Capsid Assembly and Replication of the Common Cold Virus. Nat Chem. 2018 Jun;10(6):599-606.

Additional Infomation
IMP-1088 is a potent dual inhibitor of human NMT1 and NMT2 with IC50 <1 nM for both enzymes and Kd <210 pM for HsNMT1. It effectively inhibits the production of infectious rhinovirus virions by blocking N-myristoylation of the VP0 protein. IMP-1088 shows low nanomolar antiviral activity against multiple rhinovirus strains, poliovirus, and foot-and-mouth disease virus. It has a molecular formula of C25H29F2N5O and a molecular weight of 453.53 g/mol. IMP-1088 is a valuable research tool for studying N-myristoylation and developing antiviral therapies.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C25H29F2N5O
Molecular Weight
453.53
Exact Mass
453.234
Elemental Analysis
C, 66.21; H, 6.45; F, 8.38; N, 15.44; O, 3.53
CAS #
2059148-82-0
PubChem CID
132274735
Appearance
Colorless to light yellow solid powder
Density
1.2±0.1 g/cm3
Boiling Point
566.9±50.0 °C at 760 mmHg
Flash Point
296.6±30.1 °C
Vapour Pressure
0.0±1.6 mmHg at 25°C
Index of Refraction
1.595
LogP
3.73
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
7
Heavy Atom Count
33
Complexity
642
Defined Atom Stereocenter Count
0
InChi Key
SOXNKJCQBRQUMS-UHFFFAOYSA-N
InChi Code
InChI=1S/C25H29F2N5O/c1-15-18(16(2)31(5)28-15)11-12-33-25-19(8-9-21(26)24(25)27)17-7-10-23-20(13-17)22(14-30(3)4)29-32(23)6/h7-10,13H,11-12,14H2,1-6H3
Chemical Name
1-[5-[3,4-difluoro-2-[2-(1,3,5-trimethylpyrazol-4-yl)ethoxy]phenyl]-1-methylindazol-3-yl]-N,N-dimethylmethanamine
Synonyms
IMP1088; IMP 1088; IMP-1088
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~220.5 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (5.51 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (5.51 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (5.51 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.2049 mL 11.0246 mL 22.0493 mL
5 mM 0.4410 mL 2.2049 mL 4.4099 mL
10 mM 0.2205 mL 1.1025 mL 2.2049 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • Structures of IMP-1088 and IMP-1031, and in vitro inhibitory activity (IC50) on human NMT1 (HsNMT1) and NMT2 (HsNMT2). Nat Chem . 2018 Jun;10(6):599-606.
  • IMP-1088 inhibits production of infectious rhinovirus particles by blocking virus assembly. Nat Chem . 2018 Jun;10(6):599-606.
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