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HCV-IN-31

Cat No.:V52923 Purity: ≥98%
HCV (hepatitis C virus)-IN-31 (compound 4) is an inhibitor (blocker/antagonist) of HCV (hepatitis C virus), and its EC50/EC95 value of inhibiting HCV (hepatitis C virus) replicon is 15.7 μM.
HCV-IN-31
HCV-IN-31 Chemical Structure CAS No.: 1998705-62-6
Product category: HCV
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
50mg
100mg
Other Sizes

Other Forms of HCV-IN-31:

  • Bemnifosbuvir hemisulfate (RG-6422; AT-527)
  • Arbemnifosbuvir
  • Bemnifosbuvir (AT-511)
Official Supplier of:
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Product Description
HCV (hepatitis C virus)-IN-31 (compound 4) is an inhibitor (blocker/antagonist) of HCV (hepatitis C virus), and its EC50/EC95 value of inhibiting HCV (hepatitis C virus) replicon is 15.7 μM.
HCV-IN-31 (CAS# 1998705-62-6) is a small-molecule nucleoside inhibitor designed to target hepatitis C virus (HCV). With a molecular formula of C12H17FN6O3 and a molecular weight of 312.30, this compound is specifically designed to block HCV replicon replication in vitro. It exhibits moderate antiviral activity with an EC50/EC95 of 15.7 µM against the HCV replicon. HCV-IN-31 is a valuable tool compound for studying the HCV lifecycle and for early-stage antiviral screening.
Biological Activity I Assay Protocols (From Reference)
Targets
EC50/EC95: 15.7 μM (HCV replicon)[1].
HCV-IN-31 targets the hepatitis C virus (HCV) replication machinery. As a nucleoside inhibitor, it is designed to disrupt key HCV replication pathways, enabling detailed dissection of RNA amplification processes. The compound's mechanism of action involves interfering with viral RNA synthesis. It is useful for confirming molecular nodes sensitive to replication-directed inhibition and for studying resistance mechanisms. Resistance can arise from mutations in the viral polymerase, reducing the drug's ability to inhibit viral replication.
ln Vitro
In vitro, HCV-IN-31 exhibits antiviral activity by inhibiting the replication of the HCV replicon, with an EC50/EC95 of 15.7 µM. This activity is assessed in HCV replicon assays, where cells harboring a subgenomic HCV replicon are treated with the compound. The compound's moderate antiviral activity makes it useful for early-stage research into the HCV lifecycle and for antiviral screening. Its activity is also evaluated in viral RNA suppression quantification assays.
ln Vivo
In vivo studies for HCV-IN-31 are not extensively detailed in the provided literature. As a research compound, its potential for in vivo applications would depend on its pharmacokinetic properties and antiviral efficacy. Studies in appropriate animal models would be needed to evaluate its in vivo efficacy, pharmacokinetics, and safety profile. It is primarily used as a tool compound for mechanistic antiviral studies and early-stage drug discovery.
Enzyme Assay
For non-cellular enzyme/receptor binding studies, HCV-IN-31's activity is evaluated in HCV replicon assays. These assays typically use cells harboring a subgenomic HCV replicon that expresses a reporter gene. The cells are treated with varying concentrations of the compound, and the inhibition of replicon replication is measured by quantifying the reporter gene expression, providing EC50 values. This cell-based assay is the primary method for assessing the compound's antiviral activity.
Cell Assay
For in vitro cellular experiments, HCV-IN-31 is tested in cell lines harboring the HCV replicon. Cells are cultured and treated with the compound at various concentrations. Viral replication is assessed by measuring the levels of HCV RNA or the activity of a reporter gene (such as luciferase) that is linked to viral replication. The EC50 is determined from the dose-response curve. Cytotoxicity is assessed in parallel using standard cell viability assays to determine the selectivity index.
Animal Protocol
In vivo animal studies for HCV-IN-31 are not extensively documented. As a research compound for studying HCV replication, its in vivo evaluation would require appropriate animal models of HCV infection. The compound could be administered via an appropriate route, and its efficacy would be assessed by measuring viral load in the blood and liver. However, such studies are not detailed in the provided sources.
ADME/Pharmacokinetics
Pharmacokinetic properties of HCV-IN-31 are not extensively detailed in the provided sources. It has a molecular weight of 312.30. It is a solid with good solubility in DMSO and should be stored at 2-8°C, protected from light. The compound is stable under these conditions. Its solubility in DMSO is up to approximately 60 mg/mL. Comprehensive pharmacokinetic studies are needed to fully characterize its ADME properties.
Toxicity/Toxicokinetics
Toxicity data for HCV-IN-31 is not extensively detailed in the provided literature. As a research compound intended for laboratory use, standard safety precautions should be followed when handling it. It is not intended for human use. Its safety profile would be evaluated in the context of its development as an antiviral agent, but such data is not provided in the available sources.
References

[1]. BETA-D-2-DEOXY-2-ALPHA-FLUORO-2- BETA-C-SUBSTITUTED-2-MODIFIED N6-SUBSTITUTED PURINE NUCLEOTDES FORHCV TREATMENT. US20160257706A1.

Additional Infomation
HCV-IN-31 is a nucleoside inhibitor of hepatitis C virus (HCV) with a molecular formula of C12H17FN6O3 and a molecular weight of 312.30. It inhibits HCV replicon replication with an EC50/EC95 of 15.7 µM. The compound is a valuable research tool for studying the HCV lifecycle, viral RNA suppression, and resistance mechanisms. It is intended for research use only and is not for human therapeutic applications.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C12H17FN6O3
Molecular Weight
312.3002
Exact Mass
312.134
CAS #
1998705-62-6
Related CAS #
Bemnifosbuvir hemisulfate;2241337-84-6;Bemnifosbuvir;1998705-64-8
PubChem CID
122510185
Appearance
White to off-white solid powder
LogP
0.4
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
9
Rotatable Bond Count
3
Heavy Atom Count
22
Complexity
420
Defined Atom Stereocenter Count
4
SMILES
F[C@]1(C([H])([H])[H])[C@@]([H])([C@@]([H])(C([H])([H])O[H])O[C@@]1([H])N1C([H])=NC2=C(N([H])C([H])([H])[H])N=C(N([H])[H])N=C12)O[H]
InChi Key
HPINXBYYNVDDEB-GSWPYSDESA-N
InChi Code
InChI=1S/C12H17FN6O3/c1-12(13)7(21)5(3-20)22-10(12)19-4-16-6-8(15-2)17-11(14)18-9(6)19/h4-5,7,10,20-21H,3H2,1-2H3,(H3,14,15,17,18)/t5-,7-,10-,12-/m1/s1
Chemical Name
(2R,3R,4R,5R)-5-[2-amino-6-(methylamino)purin-9-yl]-4-fluoro-2-(hydroxymethyl)-4-methyloxolan-3-ol
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : 60 mg/mL (192.12 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (8.01 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (8.01 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (8.01 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.2020 mL 16.0102 mL 32.0205 mL
5 mM 0.6404 mL 3.2020 mL 6.4041 mL
10 mM 0.3202 mL 1.6010 mL 3.2020 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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